mRNA_D-dichotoma_M_contig1087.740.1 (mRNA) Dictyota dichotoma ODC1387m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dichotoma_M_contig1087.740.1
Unique NamemRNA_D-dichotoma_M_contig1087.740.1
TypemRNA
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Homology
[Close]
BLAST of mRNA_D-dichotoma_M_contig1087.740.1 vs. uniprot
Match: A0A6H5L0S3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0S3_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 2.240e-39
Identity = 80/117 (68.38%), Postives = 99/117 (84.62%), Query Frame = 1 
Query:  535 LAAREAIRRMEEEEQKRLAARQERIDRVAAERATTEENPDAGVIPEIVANRMLARMIPFFLLPSFGGVGVFFGVKVMTQQYGYSIPAYVVAYATQATFFVALLGITYSILSASWDED 885
            ++AR+AI RME EE++R+A RQERID V   +A TE +PDAG IPEIV+NRML+RM+PFFLLP+ GGVGVF  V V++ +Y Y+IPAY+VAYATQA FFVAL GITY+I+SASWDED
Sbjct:  144 VSARKAIERMEAEERERIAKRQERIDSVMQAKAATEGDPDAGSIPEIVSNRMLSRMVPFFLLPALGGVGVFVAVYVLSHKYDYTIPAYIVAYATQAPFFVALAGITYAIMSASWDED 260
[Close]
BLAST of mRNA_D-dichotoma_M_contig1087.740.1 vs. uniprot
Match: D8LCB7_ECTSI (All0748 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCB7_ECTSI)

HSP 1 Score: 153 bits (387), Expect = 5.970e-38
Identity = 78/117 (66.67%), Postives = 98/117 (83.76%), Query Frame = 1 
Query:  535 LAAREAIRRMEEEEQKRLAARQERIDRVAAERATTEENPDAGVIPEIVANRMLARMIPFFLLPSFGGVGVFFGVKVMTQQYGYSIPAYVVAYATQATFFVALLGITYSILSASWDED 885
            ++AR+ I RME EE++R+A RQERID V   +A TE +PDAG IPEIV+NRML+RM+PFF+LP+ GGVGVF  V V++ +Y Y+IPAY+VAYATQA FFVAL GITY+I+SASWDED
Sbjct:  144 VSARKEIERMEAEERERIAKRQERIDSVMQAKAATEGDPDAGSIPEIVSNRMLSRMVPFFVLPALGGVGVFVTVYVLSHKYDYTIPAYIVAYATQAPFFVALAGITYAIMSASWDED 260
[Close]
BLAST of mRNA_D-dichotoma_M_contig1087.740.1 vs. uniprot
Match: A0A835Z7Y5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Y5_9STRA)

HSP 1 Score: 121 bits (303), Expect = 4.500e-27
Identity = 63/116 (54.31%), Postives = 90/116 (77.59%), Query Frame = 1 
Query:  538 AAREAIRRMEEEEQKRLAARQERIDRVAAERATTEENPDAGVIPEIVANRMLARMIPFFLLPSFGGVGVFFGVKVMTQQYGYSIPAYVVAYATQATFFVALLGITYSILSASWDED 885
            AA+E + RM+EE ++R+ A+++R+  + A +A T++NPDAGVIP++VANRMLARMIPFF+LP   GVGVF    V+ ++Y  S    +VA+ATQA F ++L+GITY+ILSASWD +
Sbjct:   94 AAKEDLARMKEERERRVQAQKQRMADIKAAQAITKDNPDAGVIPDLVANRMLARMIPFFVLPVLAGVGVFVYFFVLAKRYDTSFQPGMVAFATQAPFAISLVGITYAILSASWDPE 209
[Close]
BLAST of mRNA_D-dichotoma_M_contig1087.740.1 vs. uniprot
Match: A0A7S2STX2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STX2_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 4.010e-17
Identity = 44/82 (53.66%), Postives = 56/82 (68.29%), Query Frame = 1 
Query:  643 ENPDAGVIPEIVANRMLARMIPFFLLPSFGGVGVFFGVKVMTQQYGYSIPAYVVAYATQATFFVALLGITYSILSASWDEDV 888
            ENPDAGVIPE+VA RML RM+P   +P FGG+ +F G  +   ++   I   VVAYAT A + + L G+TY ILSASWD +V
Sbjct:  113 ENPDAGVIPEVVAQRMLGRMLPLAAVPIFGGIALFVGFYIAATKWDLEIQPTVVAYATTAPWLLGLAGLTYGILSASWDPEV 194
[Close]
BLAST of mRNA_D-dichotoma_M_contig1087.740.1 vs. uniprot
Match: A0A6U0UN43_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0UN43_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.060e-16
Identity = 47/99 (47.47%), Postives = 62/99 (62.63%), Query Frame = 1 
Query:  589 AARQERIDRVAAERATTEENPDAGVIPEIVANRMLARMIPFFLLPSFGGVGVFFGVKVMTQQYGYSIPAYVVAYATQATFFVALLGITYSILSASWDED 885
            A R  ++D    ERA   +NP AGVIP+ V+ RML RM+P F LP   G+  F       Q+ G  +   VVAY+TQA FF+ L+G++Y +LSASWDED
Sbjct:  109 AERAAKVDMYVEERAEIRKNPRAGVIPDAVSKRMLGRMVPLFSLPFVLGIAAFVAFYFYGQKTGNQMQPTVVAYSTQAPFFLGLVGLSYGVLSASWDED 207
[Close]
BLAST of mRNA_D-dichotoma_M_contig1087.740.1 vs. uniprot
Match: A0A7S3U2G1_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3U2G1_9SPIT)

HSP 1 Score: 87.0 bits (214), Expect = 3.390e-15
Identity = 49/97 (50.52%), Postives = 62/97 (63.92%), Query Frame = 1 
Query:  613 RVAAERAT-TEE-----NPDAGVIPEIVANRMLARMIPFFLLPSFGGVGVFFGVKVMTQQYGYSIPAYVVAYATQATFFVALLGITYSILSASWDED 885
            R AA RAT TEE     +P AGV+PE V+NRM+AR+IPF  LP FG   +F G   +  Q  Y IP   +A ATQA F ++  GIT+ ++S SWDED
Sbjct:  119 RAAARRATYTEEEMTPLDPTAGVMPERVSNRMIARVIPFAGLPVFGAFALFGGAYYLNTQLDYGIPPQAIALATQAMFALSFAGITWGVMSTSWDED 215
[Close]
BLAST of mRNA_D-dichotoma_M_contig1087.740.1 vs. uniprot
Match: R1FQ09_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FQ09_EMIHU)

HSP 1 Score: 84.7 bits (208), Expect = 1.470e-14
Identity = 40/80 (50.00%), Postives = 54/80 (67.50%), Query Frame = 1 
Query:  646 NPDAGVIPEIVANRMLARMIPFFLLPSFGGVGVFFGVKVMTQQYGYSIPAYVVAYATQATFFVALLGITYSILSASWDED 885
            +P AGV+PE+V+NRML+R++PF  LP FG   VF G      Q    +P  V+AYATQA F ++  GIT+ +LS SWDE+
Sbjct:  113 DPSAGVMPEVVSNRMLSRVVPFAGLPVFGSFLVFVGAYYANTQLDLDVPPQVIAYATQACFALSFAGITWGVLSTSWDEE 192
[Close]
BLAST of mRNA_D-dichotoma_M_contig1087.740.1 vs. uniprot
Match: A0A7S2BKL3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BKL3_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 9.990e-14
Identity = 46/120 (38.33%), Postives = 69/120 (57.50%), Query Frame = 1 
Query:  529 ASLAAREAIRRMEEEEQKRLAARQERIDRVAAERATTEENPDAGVIPEIVANRMLARMIPFFLLPSFGGVGVFFGVKVMTQQYGYSIPAYVVAYATQATFFVALLGITYSILSASWDEDV 888
            +S A  E + ++  + ++ LA   ER   ++  +   +ENP AGVIPE VANRML RM+     P FGG+G+F    +   Q+   +   +VA AT   + + L G+TY +LSASWD +V
Sbjct:   73 SSTAGAELLTKLRAQREEDLAKADERYAELSEVQEALKENPAAGVIPEAVANRMLKRMLTLAAPPIFGGIGLFVVFYISATQWDTDVAPPIVAAATTVPWLLGLAGLTYGVLSASWDPEV 192
[Close]
BLAST of mRNA_D-dichotoma_M_contig1087.740.1 vs. uniprot
Match: A0A7S2NSH2_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2NSH2_9EUKA)

HSP 1 Score: 82.4 bits (202), Expect = 1.260e-13
Identity = 38/80 (47.50%), Postives = 51/80 (63.75%), Query Frame = 1 
Query:  646 NPDAGVIPEIVANRMLARMIPFFLLPSFGGVGVFFGVKVMTQQYGYSIPAYVVAYATQATFFVALLGITYSILSASWDED 885
            +P AGV+PE+V+ RML R++PF  LP FGG  VF G      Q    +P  +VAYATQ    ++  GITY ++S SWDE+
Sbjct:  139 DPSAGVMPEVVSQRMLNRVVPFAALPVFGGALVFVGFYYANTQLELDVPPMIVAYATQVLLLLSFAGITYGVMSTSWDEE 218
[Close]
BLAST of mRNA_D-dichotoma_M_contig1087.740.1 vs. uniprot
Match: A0A7S2EJY6_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EJY6_TRICV)

HSP 1 Score: 71.6 bits (174), Expect = 1.680e-11
Identity = 40/85 (47.06%), Postives = 48/85 (56.47%), Query Frame = 1 
Query:  631 ATTEENPDAGVIPEIVANRMLARMIPFFLLPSFGGVGVFFGVKVMTQQYGYSIPAYVVAYATQATFFVALLGITYSILSASWDED 885
            A ++   +A  IPE VA RM  RM+PF  LP FGG+G F     +    G      VVA  T A   V LLGITYS++SASWD D
Sbjct:   10 ADSQVKEEAAAIPEKVAQRMGRRMLPFVGLPLFGGMGAFVAFWYLATYRGMEFQPAVVATTTVAMLAVGLLGITYSVMSASWDPD 94
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1087.740.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0S3_9PHAE2.240e-3968.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCB7_ECTSI5.970e-3866.67All0748 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A835Z7Y5_9STRA4.500e-2754.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2STX2_9STRA4.010e-1753.66Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6U0UN43_9STRA1.060e-1647.47Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S3U2G1_9SPIT3.390e-1550.52Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]
R1FQ09_EMIHU1.470e-1450.00Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
A0A7S2BKL3_9STRA9.990e-1438.33Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2NSH2_9EUKA1.260e-1347.50Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A7S2EJY6_TRICV1.680e-1147.06Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig1087contigD-dichotoma_M_contig1087:54651..58806 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score153.3
Seed ortholog evalue2e-34
Seed eggNOG ortholog2880.D8LCB7
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009536,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464
EggNOG free text desc.Protein of unknown function (DUF3464)
EggNOG OGs2AEZ6@1,2RXKE@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorychloroplast
Ec32 ortholog descriptionProtein of unknown function DUF3464
Ec32 orthologEc-14_005350.1
Exons6
Model size1996
Cds size993
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig1087.740.1prot_D-dichotoma_M_contig1087.740.1Dictyota dichotoma ODC1387m malepolypeptideD-dichotoma_M_contig1087 55842..58731 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927584.651106-UTR-D-dichotoma_M_contig1087:54650..552091622927584.651106-UTR-D-dichotoma_M_contig1087:54650..55209Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1087 54651..55209 -
1690798048.6061754-UTR-D-dichotoma_M_contig1087:54650..552091690798048.6061754-UTR-D-dichotoma_M_contig1087:54650..55209Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1087 54651..55209 -
1622927584.6660478-UTR-D-dichotoma_M_contig1087:55472..558411622927584.6660478-UTR-D-dichotoma_M_contig1087:55472..55841Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1087 55473..55841 -
1690798048.621652-UTR-D-dichotoma_M_contig1087:55472..558411690798048.621652-UTR-D-dichotoma_M_contig1087:55472..55841Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1087 55473..55841 -
1622927584.759823-UTR-D-dichotoma_M_contig1087:58731..588061622927584.759823-UTR-D-dichotoma_M_contig1087:58731..58806Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1087 58732..58806 -
1690798048.679441-UTR-D-dichotoma_M_contig1087:58731..588061690798048.679441-UTR-D-dichotoma_M_contig1087:58731..58806Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1087 58732..58806 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927584.6819701-CDS-D-dichotoma_M_contig1087:55841..561291622927584.6819701-CDS-D-dichotoma_M_contig1087:55841..56129Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1087 55842..56129 -
1690798048.6325786-CDS-D-dichotoma_M_contig1087:55841..561291690798048.6325786-CDS-D-dichotoma_M_contig1087:55841..56129Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1087 55842..56129 -
1622927584.6983044-CDS-D-dichotoma_M_contig1087:56672..567501622927584.6983044-CDS-D-dichotoma_M_contig1087:56672..56750Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1087 56673..56750 -
1690798048.6415644-CDS-D-dichotoma_M_contig1087:56672..567501690798048.6415644-CDS-D-dichotoma_M_contig1087:56672..56750Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1087 56673..56750 -
1622927584.7131882-CDS-D-dichotoma_M_contig1087:57132..572101622927584.7131882-CDS-D-dichotoma_M_contig1087:57132..57210Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1087 57133..57210 -
1690798048.6504643-CDS-D-dichotoma_M_contig1087:57132..572101690798048.6504643-CDS-D-dichotoma_M_contig1087:57132..57210Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1087 57133..57210 -
1622927584.7269394-CDS-D-dichotoma_M_contig1087:57583..576621622927584.7269394-CDS-D-dichotoma_M_contig1087:57583..57662Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1087 57584..57662 -
1690798048.6596313-CDS-D-dichotoma_M_contig1087:57583..576621690798048.6596313-CDS-D-dichotoma_M_contig1087:57583..57662Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1087 57584..57662 -
1622927584.7397993-CDS-D-dichotoma_M_contig1087:58261..587311622927584.7397993-CDS-D-dichotoma_M_contig1087:58261..58731Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1087 58262..58731 -
1690798048.669105-CDS-D-dichotoma_M_contig1087:58261..587311690798048.669105-CDS-D-dichotoma_M_contig1087:58261..58731Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1087 58262..58731 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dichotoma_M_contig1087.740.1

>prot_D-dichotoma_M_contig1087.740.1 ID=prot_D-dichotoma_M_contig1087.740.1|Name=mRNA_D-dichotoma_M_contig1087.740.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=331bp
MGLHNIVTACFAIFPLTYPQGFYVVPSKAVRSMGATHGLMYHTSMTGIHD
RGTAAATSLAFSRSYTSPTKCRWNISSRPSTLPLAMATTNDDVKGFAQEV
NSPDSGKKGKGKSRRSKAKDDKLEAGGQSTRMGPFVDEMRNPLQQSESSS
EASLAAREAIRRMEEEEQKRLAARQERIDRVAAERATTEENPDAGVIPEI
VANRMLARMIPFFLLPSFGGVGVFFGVKVMTQQYGYSIPAYVVAYATQAT
FFVALLGITYSILSASWDEDVSEWRCEKIQGRSQICASARGPAPTPTRCP
RRPSHLRRVACDFLTVVKIMSSAPREFGAS*
back to top

mRNA from alignment at D-dichotoma_M_contig1087:54651..58806-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dichotoma_M_contig1087.740.1 ID=mRNA_D-dichotoma_M_contig1087.740.1|Name=mRNA_D-dichotoma_M_contig1087.740.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=4156bp|location=Sequence derived from alignment at D-dichotoma_M_contig1087:54651..58806- (Dictyota dichotoma ODC1387m male)
CACTATCCTTCCTTCAACGTCATCTTGAGTATCCGCCGTTGCTGTGGACA
ACTGCAGCACTTCTAGTATAAAAGGATGGGCCTTCACAATATTGTCACCG
CCTGCTTTGCCATTTTTCCATTGACGTACCCCCAGGGGTTCTACGTCGTT
CCGTCCAAAGCTGTTCGTTCTATGGGAGCAACTCATGGCTTGATGTATCA
TACATCCATGACCGGAATTCATGATCGTGGAACTGCTGCGGCGACATCAC
TGGCGTTCTCGAGATCATACACTTCTCCGACGAAATGCAGGTGGAATATC
TCAAGCAGGCCATCAACCTTACCCCTGGCGATGGCGACGACCAATGATGA
CGTCAAGGGGTTCGCCCAGGAGGTGAACTCACCTGACTCTGGAAAGAAGG
GCAAGGGGAAGAGCCGAAGATCGAAAGCCAAGGACGACAAACTTGAAGCT
GGGGGCCAGTCGACACGGATGGGTCCTTTCGTGGATGAAATGCGCAATCC
TCTGCAACAGTCAGAGTCTTCGAGTGAGGCATCGCTTGCGGCGAGGTCAG
TAGTAGTCCGGGCACGAACCTATAGTCTGATACCCGACGACAGGTTCAAC
TTGTTTCACAGGGAGGTGCATGATTGTGTTTCGTCCTCTGCTGGGAGATT
CGCCACTTGATCTGTCGCCCCGTTCCCTCAGTCTCTGCGCGGCTCACCCA
TCATCTTGGTCGCATCTCCTCGTGAGCATCGAACACTCTGGTGTTGATTA
CTTGTCACAATGGGATGGTGCCATGATGATCGAGGTGAAAAACTGGTTGC
TACGTAGTCCAGACAATCACGACTGGTGACGTTCCGTGTACCATCGACAA
GATAAGCTGATCTGTCCATGGTTGCAGAACGCGATATGCCACGGGGGGGG
ATAGACTGTCCCTGTCATTGTTTGGAGCTGCTACGGTAGGTATCATCAGT
ACAGTTAGAACAACTCATCAGGGCCAGCGATCTGCAAAGGCGGGCGCCCT
CCACATCGAGGGGCGCAATAAAGAATGAGTCGTTGGGTTCAATGGTTGCC
GCTGCAATACCTGTGTGAGTCCCAGACGTGCACACCGTGTTCCCTCGGTG
AAGTTGAGCTTTGGACACTTGCCTATGGTGCGCTGGACGCGTAGGGAAGC
CATCCGTCGAATGGAGGAAGAAGAACAAAAACGCTTGGCTGCTCGTCAGG
AGCGAATCGACAGGGTTGCCGCGGTGAGCCGCCCAGGTTGATCGACTCAT
CGAGCCCAACGAATTCCCTACGTGACACGGTGTACAATTAGATGCATGTG
CTGTATATATCGAGTCACCCATGTCCGGCAAGCTGACAGACATGGGAGTC
ACGAAGGTACTGTAGATAACTCGGTGTCCTTCCCTTCATGATGTGTCCTT
CATGATGGAACTCACAAGGCAGCTGATGCACGTGGTGAGGTATCTCCACG
ACTTACCTCAGAGACTAAGCCTGCGTTTCATAGGGTACTATAGTACCATA
GATGATGGAACCGCTTGTTTCATCGACGTGCATCACCTGAGTCCCGCGGG
AACCACATGCGTCCTCGCGATGACCGCGGCACACGCAACTGCGCAGGAGA
GGGCGACAACAGAGGAGAACCCCGACGCCGGCGTTATTCCCGAGATCGTG
GCCAATCGAATGCTCGCGAGGATGGTAAGCAGCCAGTCGAAGAAGCTCGA
ATCAGGAGTAGGCGAAAGCGAAGGCCATCACATGGATAGGTGGCATGGTT
CCTGCAGTCGTTCACGATGGATAACAGGCAGAAGGATATTGCAAGAGACC
CTGTGATTGCCAAGTCCCGTGGCCACGGAATGTTCTCTGTCTCGCACGGG
AAGCAAATCCGAAGAAACCCGGGGCTTGAAGCTGTACAACACCATGCGTG
TCTCTGTCTGCAACAAGTTGCCCTGCTCCGGAGAACAGAGTGACGATCCG
CAGGGCTCGACCCGTCGCCGGGCTCGCACTAGGGTGATGAAGACCCTCTC
AATATCGTCCCGTGTTACGTTGCGTCCCGTCGCGATACGTGCCGTGGCTC
TGACAGATCCCGTTTTTCTTGCTGCCGTCGTTCGGGGGAGTCGGAGTGTT
CTTCGGGGTGAAAGTGATGACGCAGCAGTACGGGGTAAGTCCGTGCAGCA
AGAGCGAGTGCTGAGTGCTGAGTGCTGAATGCTTATGAAGATAGTTCGCC
TTCTTTGGCTGGTTACATACTTACATACTAATTCCAACTATCTTGGGTCA
AAGGGTCACTTTGGTGCGAGTCAAAGTACCGTAGCGCCGAGCGGGGTTTT
TCTATCCTGTTTCGGAATGAGAAATATCACCGTTCGGGGACGTCTGGAGG
GTGGTGAACGATGCGCGCCTTTGCTCTCTGCACGATGTGTACGGATACCG
CGGGCACGTGTAAGCCACGCCTGCGGGGAATATGAATCATTTCGCCGCAG
CACGTGTTCGAACCCGCATGCGCAGGACCGCTCCGAACATTCGGAGCCGC
TGAAATATTAAACATCGGTAGGGAGTCTCCACTGGAGATGTAATGGGGGT
GATTAATGCCCCGGGGCCGTCCCTCGCCCGTCCGTTCGCTCGTTGTATCT
CTTGTGTGCATCCCGCCGGGGCCTCGTCCCGCCGGGCGGGCTGCGGGATC
ATCGGCGTCTTCCGATGCGCGTCGCAGTACTCGATCCCCGCCTACGTAGT
TGCCTACGCAACGCAGGCGACTTTCTTCGTTGCCCTCCTCGGGATCACCT
ACTCGATCCTGTCGGCGAGCTGGGACGAAGACGTGAGTGAGTGGCGCTGC
GAAAAGATCCAAGGACGTAGTCAGATATGTGCATCGGCCAGGGGCCCGGC
ACCGACGCCGACAAGATGTCCTCGTCGCCCGTCTCATCTCCGACGCGTCG
CTTGCGATTTTCTGACGGTGGTCAAGATCATGAGTTCGGCACCGCGGGAG
TTTGGTGCCTCGTGAGTGATTCCTCGAGAAGTTCATTCTCTCGACCGTCC
CACGCGCCACGCGTTCGACTGGGGCTCACGGGATCGCTCACGTTCCGTGG
TCTGCGTTGATAACGGCATGTCCACCCCCTTGCTTTGGTTCCCTGTAGCT
TCCATCGGCTCATTCGCGCACAGCACTTCGGCATGAGACGAGCAGGGCAG
ACAGTGCGTGTTGCAGAGCTCTCGCTTGTGTACCCGAGATGACACTTACG
ATGCTGTTTCCCGTCGCCAGAGAGAGGGCTCGTGGTTGGGAGCTGACGAA
CTGAAGCGGAACTTGGGCAACATCAAGGACGGGCTGAAGCGATCGAGCGA
CCGAATGGAAGTGGAGGATATGATGACTGCCGAGGTGCGATCTATGGCAA
GAAGTCCAATCCTCCGCGAGAGTCGCGTGGGGGGATGGGGAAGAAAGAGT
TAGCTTATGCTTCCCGCGCGCGCTTGTCCTGGCCGTGCACTTCCGTGAGG
CCACGCGCACGAGTGGAATGACTGGAGTCTCGGTAGGAATGTCCTGCGTG
AAAGATGAACATTTTCCCCCGTGACCACATCGCCAATCGTCACGTCCCCG
TGTCCCCGTGTCCCCATGTCCCTTCCGCTCGTTCGTCCGCACGCCAGGAG
CGGAAGGTCAAGGCAAACCGTTACGAGCGACGCCAGGCGCGTAATCAAGA
AGCCGACGACGAGTAGGGGCCGAGCGTGTGGTGTCTAGGACCGCCTGACT
CGTCGATCATTACTTCGCCGCAAGCACGGGAGCATAACCATGGTTTCGGT
CTCCGGCGCAGTTACTGCACAATATTATATAGAGTAGTATTTTTGTTACC
TGGTTGGACGAGAAGAAACACAGGGAAGATGGATGGAATTATCTGAAAAC
ACTGCACGGTGCCCCGTCGGCGCTTCGCGGGGTCTACACGAAAGAGTCTT
CTCATTCACTTGATGCCTCTGTTGGTAGTAGCCCACGCGCGAGGGGATCC
CCTTCGCTTCCCGTCGTCGGGAGTCGAGGATGCCGCCGCTGCCCAAGAAA
GCTCCCGGAGACACGTTTCTTGTAATGTCACGAGGTGGTTCGTCGTGGCC
CGGGACGTTGGCCCAACCCCCCCCCTCCCACTCACTAACAAGGTCTCGGT
GCTTCGCACGGATTTTCCCCAGAAACTTCCAGCCGATCCAATCAGATCCT
ATCGGG
back to top

Coding sequence (CDS) from alignment at D-dichotoma_M_contig1087:54651..58806-

>mRNA_D-dichotoma_M_contig1087.740.1 ID=mRNA_D-dichotoma_M_contig1087.740.1|Name=mRNA_D-dichotoma_M_contig1087.740.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=1986bp|location=Sequence derived from alignment at D-dichotoma_M_contig1087:54651..58806- (Dictyota dichotoma ODC1387m male)
ATGGGCCTTCACAATATTGTCACCGCCTGCTTTGCCATTTTTCCATTGAC
GTACCCCCAGGGGTTCTACGTCGTTCCGTCCAAAGCTGTTCGTTCTATGG
GAGCAACTCATGGCTTGATGTATCATACATCCATGACCGGAATTCATGAT
CGTGGAACTGCTGCGGCGACATCACTGGCGTTCTCGAGATCATACACTTC
TCCGACGAAATGCAGGTGGAATATCTCAAGCAGGCCATCAACCTTACCCC
TGGCGATGGCGACGACCAATGATGACGTCAAGGGGTTCGCCCAGGAGGTG
AACTCACCTGACTCTGGAAAGAAGGGCAAGGGGAAGAGCCGAAGATCGAA
AGCCAAGGACGACAAACTTGAAGCTGGGGGCCAGTCGACACGGATGGGTC
CTTTCGTGGATGAAATGCGCAATCCTCTGCAACAGTCAGAGTCTTCGAGT
GAGGCATCGCTTGCGGCGAGATGGGCCTTCACAATATTGTCACCGCCTGC
TTTGCCATTTTTCCATTGACGTACCCCCAGGGGTTCTACGTCGTTCCGTC
CAAAGCTGTTCGTTCTATGGGAGCAACTCATGGCTTGATGTATCATACAT
CCATGACCGGAATTCATGATCGTGGAACTGCTGCGGCGACATCACTGGCG
TTCTCGAGATCATACACTTCTCCGACGAAATGCAGGTGGAATATCTCAAG
CAGGCCATCAACCTTACCCCTGGCGATGGCGACGACCAATGATGACGTCA
AGGGGTTCGCCCAGGAGGTGAACTCACCTGACTCTGGAAAGAAGGGCAAG
GGGAAGAGCCGAAGATCGAAAGCCAAGGACGACAAACTTGAAGCTGGGGG
CCAGTCGACACGGATGGGTCCTTTCGTGGATGAAATGCGCAATCCTCTGC
AACAGTCAGAGTCTTCGAGTGAGGCATCGCTTGCGGCGAGGGAAGCCATC
CGTCGAATGGAGGAAGAAGAACAAAAACGCTTGGCTGCTCGTCAGGAGCG
AATCGACAGGGTTGCCGCGGGAAGCCATCCGTCGAATGGAGGAAGAAGAA
CAAAAACGCTTGGCTGCTCGTCAGGAGCGAATCGACAGGGTTGCCGCGGA
GAGGGCGACAACAGAGGAGAACCCCGACGCCGGCGTTATTCCCGAGATCG
TGGCCAATCGAATGCTCGCGAGGATGGAGAGGGCGACAACAGAGGAGAAC
CCCGACGCCGGCGTTATTCCCGAGATCGTGGCCAATCGAATGCTCGCGAG
GATGATCCCGTTTTTCTTGCTGCCGTCGTTCGGGGGAGTCGGAGTGTTCT
TCGGGGTGAAAGTGATGACGCAGCAGTACGGGATCCCGTTTTTCTTGCTG
CCGTCGTTCGGGGGAGTCGGAGTGTTCTTCGGGGTGAAAGTGATGACGCA
GCAGTACGGGTACTCGATCCCCGCCTACGTAGTTGCCTACGCAACGCAGG
CGACTTTCTTCGTTGCCCTCCTCGGGATCACCTACTCGATCCTGTCGGCG
AGCTGGGACGAAGACGTGAGTGAGTGGCGCTGCGAAAAGATCCAAGGACG
TAGTCAGATATGTGCATCGGCCAGGGGCCCGGCACCGACGCCGACAAGAT
GTCCTCGTCGCCCGTCTCATCTCCGACGCGTCGCTTGCGATTTTCTGACG
GTGGTCAAGATCATGAGTTCGGCACCGCGGGAGTTTGGTGCCTCGTGATA
CTCGATCCCCGCCTACGTAGTTGCCTACGCAACGCAGGCGACTTTCTTCG
TTGCCCTCCTCGGGATCACCTACTCGATCCTGTCGGCGAGCTGGGACGAA
GACGTGAGTGAGTGGCGCTGCGAAAAGATCCAAGGACGTAGTCAGATATG
TGCATCGGCCAGGGGCCCGGCACCGACGCCGACAAGATGTCCTCGTCGCC
CGTCTCATCTCCGACGCGTCGCTTGCGATTTTCTGACGGTGGTCAAGATC
ATGAGTTCGGCACCGCGGGAGTTTGGTGCCTCGTGA
back to top