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Homology
BLAST of mRNA_D-dichotoma_M_contig1085.731.1 vs. uniprot
Match: D7G2Y8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Y8_ECTSI) HSP 1 Score: 97.8 bits (242), Expect = 1.260e-18 Identity = 50/73 (68.49%), Postives = 58/73 (79.45%), Query Frame = 2
Query: 806 ESDMEYDLEEARKLLEELDEDQSGLIDFAEFCAFIARVKAGDEKLRRFATLAEALNASPAAMLEEQCRKRNIK 1024
ESDMEYD ARKLLEELD D+SGLIDF EFCAFIAR+KAGD KL+ FA L E LN + +LEEQC +R++K
Sbjct: 73 ESDMEYDETSARKLLEELDGDKSGLIDFQEFCAFIARIKAGDSKLKGFAVLTETLNTTSIGVLEEQCLQRHLK 145
BLAST of mRNA_D-dichotoma_M_contig1085.731.1 vs. uniprot
Match: A0A6H5L2M8_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2M8_9PHAE) HSP 1 Score: 90.5 bits (223), Expect = 1.210e-16 Identity = 46/70 (65.71%), Postives = 54/70 (77.14%), Query Frame = 2
Query: 815 MEYDLEEARKLLEELDEDQSGLIDFAEFCAFIARVKAGDEKLRRFATLAEALNASPAAMLEEQCRKRNIK 1024
MEYD AR+LLE LD D+SGLIDF EFCAFIAR+KAGD KL+ FA L E LN + +LEEQC KR++K
Sbjct: 1 MEYDETSARELLEVLDGDKSGLIDFQEFCAFIARIKAGDSKLKGFAALTETLNTTSVGILEEQCLKRHLK 70
BLAST of mRNA_D-dichotoma_M_contig1085.731.1 vs. uniprot
Match: A0A7S1U908_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U908_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 3.010e-7 Identity = 32/73 (43.84%), Postives = 47/73 (64.38%), Query Frame = 2
Query: 806 ESDMEYDLEEARKLLEELDEDQSGLIDFAEFCAFIARVKAGDEKLRRFATLAEALNASPAAMLEEQCRKRNIK 1024
E + ++ +E+ ++LE +D D SG IDF+EF RVK GD+ L+ A L E LN SP A+LE Q +R++K
Sbjct: 63 EMETDFAMEKVLEVLEAVDADGSGEIDFSEFIELTVRVKRGDDTLKGLAKLTEVLNQSPIAVLEGQAAQRSLK 135
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 1025 |
| Cds size | 576 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622927582.7356098-CDS-D-dichotoma_M_contig1085:60296..60399 | 1622927582.7356098-CDS-D-dichotoma_M_contig1085:60296..60399 | Dictyota dichotoma ODC1387m male | CDS | D-dichotoma_M_contig1085 60297..60399 - |
| 1690798047.5005133-CDS-D-dichotoma_M_contig1085:60296..60399 | 1690798047.5005133-CDS-D-dichotoma_M_contig1085:60296..60399 | Dictyota dichotoma ODC1387m male | CDS | D-dichotoma_M_contig1085 60297..60399 - |
| 1622927582.7497075-CDS-D-dichotoma_M_contig1085:60610..60717 | 1622927582.7497075-CDS-D-dichotoma_M_contig1085:60610..60717 | Dictyota dichotoma ODC1387m male | CDS | D-dichotoma_M_contig1085 60611..60717 - |
| 1690798047.510023-CDS-D-dichotoma_M_contig1085:60610..60717 | 1690798047.510023-CDS-D-dichotoma_M_contig1085:60610..60717 | Dictyota dichotoma ODC1387m male | CDS | D-dichotoma_M_contig1085 60611..60717 - |
| 1622927582.7674787-CDS-D-dichotoma_M_contig1085:63655..64021 | 1622927582.7674787-CDS-D-dichotoma_M_contig1085:63655..64021 | Dictyota dichotoma ODC1387m male | CDS | D-dichotoma_M_contig1085 63656..64021 - |
| 1690798047.5275085-CDS-D-dichotoma_M_contig1085:63655..64021 | 1690798047.5275085-CDS-D-dichotoma_M_contig1085:63655..64021 | Dictyota dichotoma ODC1387m male | CDS | D-dichotoma_M_contig1085 63656..64021 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622927582.780667-UTR-D-dichotoma_M_contig1085:64021..64240 | 1622927582.780667-UTR-D-dichotoma_M_contig1085:64021..64240 | Dictyota dichotoma ODC1387m male | UTR | D-dichotoma_M_contig1085 64022..64240 - |
| 1690798047.5360117-UTR-D-dichotoma_M_contig1085:64021..64240 | 1690798047.5360117-UTR-D-dichotoma_M_contig1085:64021..64240 | Dictyota dichotoma ODC1387m male | UTR | D-dichotoma_M_contig1085 64022..64240 - |
| 1622927582.7935932-UTR-D-dichotoma_M_contig1085:66275..66504 | 1622927582.7935932-UTR-D-dichotoma_M_contig1085:66275..66504 | Dictyota dichotoma ODC1387m male | UTR | D-dichotoma_M_contig1085 66276..66504 - |
| 1690798047.5449507-UTR-D-dichotoma_M_contig1085:66275..66504 | 1690798047.5449507-UTR-D-dichotoma_M_contig1085:66275..66504 | Dictyota dichotoma ODC1387m male | UTR | D-dichotoma_M_contig1085 66276..66504 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dichotoma_M_contig1085.731.1 >prot_D-dichotoma_M_contig1085.731.1 ID=prot_D-dichotoma_M_contig1085.731.1|Name=mRNA_D-dichotoma_M_contig1085.731.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=192bp
MRSTSRRQVTRPDPNRPERESDVSRSVLHQQAHHAIHIASSSNTTRPKPT RERERCESIRAPSTGPPCDPHRVAKQHDATQTDPRESDLSRSVLHQQAHH AIHIASPSNTTQPKPTRERESDMEYDLEEARKLLEELDEDQSGLIDFAEF CAFIARVKAGDEKLRRFATLAEALNASPAAMLEEQCRKRNIK back to topmRNA from alignment at D-dichotoma_M_contig1085:60297..66504- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_D-dichotoma_M_contig1085.731.1 ID=mRNA_D-dichotoma_M_contig1085.731.1|Name=mRNA_D-dichotoma_M_contig1085.731.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=6208bp|location=Sequence derived from alignment at D-dichotoma_M_contig1085:60297..66504- (Dictyota dichotoma ODC1387m male) CCCCCGAAGCAAATTTAGGCTATCTCTATCAATGCTTCCTCAGGACAGTG
AGCATGAGCGAGCCGGGACAGGTTTTGCTTCGGGAGGAAAGCGGGATGGC
GACGAAAGCACCGAGGGACAGAGCGTCGAAATCGAGGGCGGGAAGGCGGG
CGACCTTCGAATGAGGGTTGGAAAGTACGTTTGCCCCGCGAAGCTCGTCA
ACACGTTCACCCCTATGGAATTCGAAGAGGTGAGTGCCTCTCTGATATAT
CCCCCCACGCTTTGCTCCGTATGGTGTCATGTGTCTCATGACAACCTCAA
GAATGACTTAGACTTCCCTCAGCTATTACATGATTTAGATAGACTCACTT
GTTGTTCAGAAAGGGAAAGCAAACGATAATTCAAATTATCGACTTTGTAG
TAACTGCCATACATACATGTGGTGTAAACTCCTTCACCACGTATGAACAG
CCAGATTTATGGAAAGCTCTTGGATGGTAGCATGTTCAATGGATCAATGG
GAAAGGACAGGGTCGGAAAGTTCTCTCTGCTGTACGATCTCGATTCCCAC
GGGAGATTGCTGAAGAAGCGTCTCGTGCGTTCTCGTTCGTCTTCAATACC
AGGAGGCAAGTTGAATCATGTTGTTCCGATTGCGCGTTGACCGAAGACAA
ATTTACGAGACGCGAACTTTTCTCTAGAGTAGCATTCGAGGTCGATTTTT
TTATGACGTGCCCTCGCTGGAGACGAGTCTCCACCTTCTGTTGTTAGCCT
TCTCCGCGTTGAAATTCATCGCAGCTCACTGCTTTCCCCCCTCCCTGGGA
CTACTTGTGACGTCGCCCTTTGTCCCACATGCGACAGCAGAGTCAGCTCA
CCTTCGTACCGTACAGTACATCGATACCATAGCGCTCCATCTCTTGCTCC
ATCCGGCTGGGTCTCGACCGTGTGTCATGAGTCCTACGGAATGATTTCTG
GCACGTGGTTGATGCGCAACGCCGCTCCTCATCGCTTTGCCACTGGCGAC
ATCACCGTTCCTCTTCCTTGATCCCTCACCGTCCATATATCTTTCTCGTG
CATGAACAACCCGTTTCGCGAACCACCTTACACTCCCGCTTCGACCGTGA
TGCAGCACTTCTTCCGACAGGTTCTACCGTATACAGCTGTGCTCAAGCCG
TAACGTAAATGAGTTAGATTATATTCAAACTACGACATCCAAGTGAATGG
GTCCAAGATATATTATTTCAATACGTTTCGACTTGAAGCAGTTCAAACCA
TAGCAAAACTAAGCTTCGGCCCATATACAGTCGAGGTCCTAAGTTAACAT
CGATTTTTTTCTGATGTTAACTTAGAATTTATTCGAACGCGGCAAATGTG
CAATCCATTCATGAACGCGGCAAGTAACGACAACTCCAATCGCTGTACTG
TTGTCTGTTGTATAATACAGAACTGTAGTTTCACCCGCACCTGCTCATGA
AACCGCTTGCTCAGCGGCGCGGATGAACATTTGATGGAGTGAATAACGCA
ATCATATCCACAACCAGGGGATGGCTGCATTTCCTCTTTTTGTGCTGTAC
CATGATTTGATGCAAACTTAGGACCGCGCGCTTCTCGGGGCGATGTTATC
CTAGGAAATCGACTGTACTCGTCATTGCGTTGCAGTGAGTCGAATTTCTG
CATTTGTCGGTTGTAATTATAAAAAATATGGAGACTCGAAAGGGTGCATC
GTAAATCCAAGTCATATCCGTCTGAACACTGATTCTTTACAGTTCCAGAT
ACTATATAAGGCGCATATAAAAGTACTTGAAACCAGAGAAAATTACTCTT
CGAGTGCATTTTACTGGCATTCAGAATGAAGCCGGTCGAATCTTCATATA
TTTATGGTTGTAACCCCCCGACAGTGACAGAATGTGCCTCACGATTCATC
TGCCGCCTTATCCATCAGTGTCTCCCTGAGTCGCTGAGTCACGTTCTCAT
TTGCCAGATAGTAGTGCCATGCAAGAACGAGCTGCCCAATCACATCGTTG
CGATGCCTGATGCCTCTCCTCTAAAGCACACTTCATTACGGAGCAGCATG
CGTCGTTCATGTCGGCTATAAGCCGTAGTTTGAAAATGCCTTCCGAGCTC
CCAGAGAGACTCGTCAATTGTTTGCTCCCTGAAGTGCTCTTATCGTTGTG
TCTCGCCGCGTTCGTTTGCCACTGGTAGAGACCCATGCGCCCGCCCCTTC
CTGATGATTGCTGCCTCGTGTGCTACCAATGCAACCCCCACGGTCGCCGC
AAACCATCACGCAGGTCGTACACCTGTTCATGAAGTACGACGCGGACGAC
AGCGGCGAGCTCGACGTGAGCGAAATGCTCAAGCTCGTGTGCGAGAGCGA
TGTGAGTCGATCCGTGCTCCATCAACAGGCCCACCATGCGATCCACATCG
CGTCGCCAAGCGACACGACCCGACCCAAACCGACCCGAAAGAGAGCGATG
TGAGTCGATCTATGCTTCATCAACAGGCCTACCATGCGATCCACATCGCG
TCGCCAAGTAACCCGACCCGACCCAAACCGACCCGAGAGAGAGAGCGATG
TGAGTCGATCCGTGCTCCATCAACAGGCCCACCATGCGATCCACATCGCG
TCGTCAAGCAATACGACGCGACCCAAACCGACCCGAGAGAGAGAGCGATG
TGAGTCGATCCGTGCTCCATCAACCGGCCCACCATGCGATCCACATCGCG
TCGCCAAGCAACACGACGCGACTCAAACCGACCCGAGAGAGAGCGATCTG
AGTCGATCCGTGCTCCATCAACAGGCCCACCATGCGATCCACATCGCATC
GCCAAGTAACACGACCCAACCCAAACCGACCCGAGAGAGAGAGAGCGATG
TGAGTCGATCCGTGCTCCATCAACAGGCCCACCAGCGATCCATATTGCTG
CAGTTCGTGGCCCTCTATAACGCGGTGCCGGTTACCGCGCTATAGAGGGC
ACCATGCTACCAAGACCGGATCGTACCGTGATTACGTAACTTAAAAAATA
TGAAAATTCGACCGACCGTATATTAAATTCCAGTCAAATGGATCCGAGAA
TCATTTTTTTATTCATTCAAGTACTGTACGTAGTGCATACAGCACTTTGA
AAATGCGAATAACGGGTGTTCAGACCGCAATCACTAGGATTTACTATGCA
ACCACTCGAATCGCAATGTTTTTATAGTTACAACCACGGCAGTCGAGAGT
TCCTGTTGCGAATCGTACCTGGGCAGGCAGTGTTACTTTTACAGGGGTTG
ACTCGCTCTTACTCACCTTAGCCTTAGCCGTGTTTGTTCAACACACTACA
GTGGTTGTCACGAGGTAAAACATAAAGATTCGACCGACTGCATATTAAAT
GCCAGTAAAATGAACCCGAAGACATTTTTTTATTGCTTTAAGCACTTTAC
ATAATAAAAACAATAGTTGAAACCGAAAAAAAAGGATGATCGGACCGATA
TCACCTAGACTTACTATGCACCCCTTCTAATTTCATTTTTTGTTTTAATA
CAATAGTTCCAACCATTGTATATCACCTCCGATCTTGGAGCCTCTCAGAT
AGATCCCGTCGAATATTCCACTCTCTCGCACCACTCATGTAGCCGGGTGC
CTGATACCGCCTATCACCGACCGGATAGGTGTATTGTGGAGAAGTGGACT
AGTGGAGCAGCATCTACTAAAGGTTTGGGTCGATGTTCCCTCACGCATGG
GCTTGTGAAGTTACAATGGTTGTAACTATTCAACAATGGAGATTCGAATG
GGTGCATAGTAAGTCCAAGTGATACAGGTTTGACCACTCAATTTTTACAG
TTTCAGGTACTTTACATGGTGTACAGCATACAACACTTGAAACTATAGAA
AATGAATCTTCGGGTTTATCTTAGGGAAATCGTCATTTGGGGGTATACCC
CCATGTTTTCTCGCCATTTGGGGGTAGACCTCTTAAGTATATGGAGTTTT
TAGTCAAATTCCAGTTTAATTTGTCCGGCTACCCCCTAATGGCAGGAAAT
CAGGGGGGCCTACCCTCTTTTATCATTTTTTCTTCAGAGCTACTACCCCC
TAGCGCCTTCAAATTCCCCCCTGGTGGCGACCCACGAACCAAACTACCCC
CTGATGGCAACCCAAGAACCAATCATATGATAACAGATATTCACATCGAA
CCAACCATTTTACCATAATCAAGGCATCCCCAGATTGCCCGAAAAAATCC
CAATCTGAATTTGTTGCCACTACTGCACGCTACTACACACCACTGTAGTG
CACACTACTACACACTACTGTAGGCCACACTACCACACACTACGGTGGTG
CACACTACCACACACTACTGTAGTGCACACGACCACACACTACTGTAGTG
CACACTACTACACACTAATGTAGTACACTATAGTAGTGCTGGGAATAGCA
CTTTAATCGCTCTTCAACGTTTTATCTTGGATTTAGCACTGACCTCTTCA
AATATCCACTAATGAACTGGTATGTCCACTACTGTACTGTAGACTAGTGT
AGACTACTGTACAACTCCATATACTTTAGAGCTATACCCCCTAGTGGCGA
GAAAATGTGGAGGTATACCCCCAAATGGCGATTTCCCTTTATCTTACTGG
CATTTAGCATGCAGCCGGTCGAGTCGAGTCGAATATTCATATTTGTTTTA
GCTACAGCCGCTTTAAGTCACGCTCGGTTACGGGCTATAGTTGTTGGGTC
GAAGTGTCTCGAAGCGAGTGGTGCCTGCGCTACTTGCACGGTTATAGCAT
GGAAGGCGTCTCGTCCCAGGGGATCGAACCACAACACTTTATCCATGGAT
GCGACAAAACAAATAATCTCCACCTCCAAGTAGTACTGCCAATTTCTCAG
GAGCTAGCTCTTTAGTTTCGCCTGCTCATAAAACGCTGCTGGCTCTACGC
CTCCACCAGTGGACAGAGACGTCCCATATGGTGCAAATTCACGCAAATCC
ACTATATATGCGGAGATATGTAGCAACTACGAAAAGTGTGACGATTCGAC
CGAGTGCATATTGAATGCCAATGAAAGGGACCCTAAGATTCATTTTTCAT
TGCTTCAAGTACTGTACGTAGTAAGTACAGTACTCGAAACTGTAAAAAAC
GAATGTTCAGACCGAAATAACTTAGATTTACTACGCAAACGTTCGAATCT
CAATATTTTCTACAGTTCCAACCACTGTAACATTGACAAAATGTTATACA
TGGTGAATTTTCCCTTCATAGAGTAGTACACAATCGAGGCCTCCGTACAC
TGTTTGTTGTCGGATCGCCATTTTATTTTTTAGACGCCTAGAGGAGCCGG
AGTCGGGTGCATTATAATGCCGTCCCCGTCACCGCGACCGATTTGACTAA
ACACACCCGAGTAAGACGCTCCTGGATGAATTTCATCGACTCTTTTCGTA
CCATCTTCATGGAACATTACCTTGAAGACTTCCACTTTTATCCTGCTGCC
TGGCAAGCATTTCCTTCGGGGGATCGGGCAATAAGGACTAACTCAACCCA
AGCGTCTAAAGAGGTAATTAACAGAGTAAGTCACCCTGACATCCAAACCC
AGGGGATAGGGGTAGGGGATTGCTGTATTTCCCGTGGTAGTGCGGCTGTT
TACCGCTCTATGTAAGGAAGCCTCGTCCCCCAGAGCCTCGTTAGATAGGG
TTATGGACTGTATTTCGATGTACGCTTAAGGGTTTGTCCGATGCAAGGCG
GATGTGCAATACCCAGGACACGGCCCTCCCCCACCCCGCCAATACCGCAA
CTCCATAACTGTCGCCCCTTCTTCTCGCGCGAGAAAGATGGAGTACGATC
TGGAGGAAGCGAGAAAGCTACTGGAGGAGTTGGATGAGGACCAAAGCGGG
CTCATCGACTTCGCAGAATTCTGCGCCTTCATCGCCCGGGTCAAGTGCGC
TTGCAAGACTTTGTTGACACGGTACTACGGTGCACGCCTCTGGCACGGTT
GTCGTCGGTTGGGAACAGGTCCGGGTGCTCCGGAGCACGCCAAGTCTACC
ATGTCGAAAATCCGCCATTCGTTTATGATGCCAAGACCCGGTAGCCTTTG
CCTTCCCCACGTCGCCAACCGAACAAAACGTCGGCCCCGGTGGTCCGACC
TGCAGAGCAGGCGACGAGAAACTGCGACGGTTCGCAACGCTCGCCGAGGC
GCTGAACGCTTCTCCCGCAGCAATGCTGGAGGAGCAGTGCCGGAAGAGGA
ACATTAAG back to topCoding sequence (CDS) from alignment at D-dichotoma_M_contig1085:60297..66504- >mRNA_D-dichotoma_M_contig1085.731.1 ID=mRNA_D-dichotoma_M_contig1085.731.1|Name=mRNA_D-dichotoma_M_contig1085.731.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=1152bp|location=Sequence derived from alignment at D-dichotoma_M_contig1085:60297..66504- (Dictyota dichotoma ODC1387m male) ATGCGATCCACATCGCGTCGCCAAGTAACCCGACCCGACCCAAACCGACC CGAGAGAGAGAGCGATGTGAGTCGATCCGTGCTCCATCAACAGGCCCACC ATGCGATCCACATCGCGTCGTCAAGCAATACGACGCGACCCAAACCGACC CGAGAGAGAGAGCGATGTGAGTCGATCCGTGCTCCATCAACCGGCCCACC ATGCGATCCACATCGCGTCGCCAAGCAACACGACGCGACTCAAACCGACC CGAGAGAGAGCGATCTGAGTCGATCCGTGCTCCATCAACAGGCCCACCAT GCGATCCACATCGCATCGCCAAGTAACACGACCCAACCCAAACCGACCCG AGAGAGAGAGAGCGATATGCGATCCACATCGCGTCGCCAAGTAACCCGAC CCGACCCAAACCGACCCGAGAGAGAGAGCGATGTGAGTCGATCCGTGCTC CATCAACAGGCCCACCATGCGATCCACATCGCGTCGTCAAGCAATACGAC GCGACCCAAACCGACCCGAGAGAGAGAGCGATGTGAGTCGATCCGTGCTC CATCAACCGGCCCACCATGCGATCCACATCGCGTCGCCAAGCAACACGAC GCGACTCAAACCGACCCGAGAGAGAGCGATCTGAGTCGATCCGTGCTCCA TCAACAGGCCCACCATGCGATCCACATCGCATCGCCAAGTAACACGACCC AACCCAAACCGACCCGAGAGAGAGAGAGCGATATGGAGTACGATCTGGAG GAAGCGAGAAAGCTACTGGAGGAGTTGGATGAGGACCAAAGCGGGCTCAT CGACTTCGCAGAATTCTGCGCCTTCATCGCCCGGGTCAAATGGAGTACGA TCTGGAGGAAGCGAGAAAGCTACTGGAGGAGTTGGATGAGGACCAAAGCG GGCTCATCGACTTCGCAGAATTCTGCGCCTTCATCGCCCGGGTCAAAGCA GGCGACGAGAAACTGCGACGGTTCGCAACGCTCGCCGAGGCGCTGAACGC TTCTCCCGCAGCAATGCTGGAGGAGCAGTGCCGGAAGAGGAACATTAAGA GCAGGCGACGAGAAACTGCGACGGTTCGCAACGCTCGCCGAGGCGCTGAA CGCTTCTCCCGCAGCAATGCTGGAGGAGCAGTGCCGGAAGAGGAACATTA AG back to top
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