mRNA_D-dichotoma_M_contig1080.700.1 (mRNA) Dictyota dichotoma ODC1387m male
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Overview
Homology
BLAST of mRNA_D-dichotoma_M_contig1080.700.1 vs. uniprot
Match: D8LKS0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS0_ECTSI) HSP 1 Score: 459 bits (1181), Expect = 2.890e-143 Identity = 273/503 (54.27%), Postives = 330/503 (65.61%), Query Frame = 3
Query: 3 GKPGSSFHIITAGRCRVMIHDPNAPGQQREVTKLHQDDFFGEVALMEKGLRTATVIAETEVTTLSLTRRHFDIYLKPIKAAILESAAAKEILDMREDDPDFEDERSKEDCNHQTEGGSNAAGGGIRGGPPNMGAGGMAE--------DGGRGRGRGGNAQNDESFVERMNHMSRRRRNPFESFRGTVVSAMQVQRRKR-----RYSDD-ELGISGNSQSK-AEGEGSGVTKGSGKLQNSPDNVSPSDG-----EGGAVESDSRNSPEKEESGCETREMQCSRAMGIVQNLARMMIFALENDMCSTLLNEMIDRPTSLPEYNKITSEVLSPDLSHWGLAYSLIRDTAHRALSKGRAKLSDGELAVMSGMFRKHPLFRQRHCVDWLEYQWMDLCTRMRLEEVRSLKKVFAHGAHGTKCYILLRGLARVLLPHEDESTGTIHYRPHSDMGPGDVMGESVLDGVHVRPSTVVAVTDCQFAVIEESDYTTVRDRGHSQMSLDDKCFHL 1451
GKPGSSFHIIT+G CRV IHDPNAPGQ+REVTKLHQDDFFGEVAL+E GLRTATV+AET+VT LSLTRRHFD+YLKPIKAAILESAAAKE+ ++ D+ +F+D D Q +G + A N G G A D G +G GG S R RRR SFRG A++VQRR R R+SDD + +S S+ A SG+ SG+L+ S N + G + V +D + SRA +V+ +ARMM+ ALEND LL+EMIDRPT+LPE NKI S+VL DL W +AY LIR TA R L K +L +GELAV+SGMFR HPL RQRHC +W EY W ++C MRLEEVRSL KV+ HGAHGTKCY+LLRGLARVL P ED +TG + Y P +D+GPGD+ G+ VL GV RP++VVAVTDC+FAV++ESDYTTV+DRG S+MSLDDKC L
Sbjct: 159 GKPGSSFHIITSGTCRVTIHDPNAPGQRREVTKLHQDDFFGEVALLESGLRTATVVAETDVTCLSLTRRHFDLYLKPIKAAILESAAAKELQVLQMDEDEFDD-----DIEDQFDGKPDKA--------RNSGVGDGAXXXXXXXXXDRGEEKGGGGTPGAGGSRSFRNPRRGGRRRKRITSFRGVATHALRVQRRARINFYDRFSDDVSIPLSPAKDSRRASRRLSGI---SGRLRGSQSNGTSGSGRWMLAKAATVATD-------------IEALTKSRATLVVRTIARMMVLALENDAYGILLDEMIDRPTTLPECNKIVSKVLCEDLRKWDVAYDLIRATARRGLRKTSTRLKEGELAVLSGMFRIHPLLRQRHCTEWPEYHWSEVCKHMRLEEVRSLDKVYVHGAHGTKCYVLLRGLARVLQPEEDPNTGVVRYVPDADLGPGDLFGDDVLRGVPKRPNSVVAVTDCEFAVLDESDYTTVKDRGLSKMSLDDKCHFL 632
BLAST of mRNA_D-dichotoma_M_contig1080.700.1 vs. uniprot
Match: A0A835Z9P8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9P8_9STRA) HSP 1 Score: 351 bits (901), Expect = 4.070e-97 Identity = 263/788 (33.38%), Postives = 378/788 (47.97%), Query Frame = 3
Query: 3 GKPGSSFHIITAGRCRVMIHDPNAPGQQREVTKLHQDDFFGEVALMEKGLRTATVIAETEVTTLSLTRRHFDIYLKPIK---------------------AAILESAAAKEILDMREDDPDFEDERSKEDCNHQTEGGSNAAGGGIRGGPPNMGAGGMAEDGGRGRGRGGNAQNDESFVERMNHMSRRRRNPFESFRGTVVSAMQVQRRKRRYSDDELGISGNSQSKAEGEGSGVTKGSGKLQNSPDNVSPSDGEGGAVESDSRNSPEKEESGCETREMQCSRAMGIVQNLARMMIFALENDMCSTLLNEMIDRPTSLPEYNKITSEVLSPDLSHWGLAYSLIRDTAHRALSKGRAKLSDGELAVMSGMFR----------------KH----------------------PLFRQRHCVDWLEYQWMDLCTRMRLEEVRSLKKVFAHGAHGTKCYILLRGLARVLLPHEDESTGTIHYRPHSDMGPGDVMGESVLDGVHVRPSTVVAVTDCQFAVIEESDYTTVRDRGHSQMSLDDKCFHLKSVGIMRMSSTYHLYKIALLVKQTEAAKDSIILQAGEASGALYFIVSGTVEVTQSRKRRL--TNQNGGVLAVASESGKERPAVVGVAGREEDLSPREEGVGGGGGFAPKTSRRVLAVLESGEYFGESGVITYFNGGGRGP-------------------GGPPPIVEQFSLVASTHVELLLLRRKHYNIIEMQMLEMLRANHAVRVRWRAHRKSEAYRSRAVLRAAKRALDEAAAVRHQGGYITSD 2126
GKPG+SF+II G C+V +HDP+ PGQQREVTKLH DFFGEVAL+EK +RTA+V+AET V LSLTRRHF+ +L IK A ++E +A K+++ +D D D H E E+GG + ++ + S RR SF+G + +++Q RK+ G E +G+ + Q +P +P D + S N+ K M C + + +A +A D+ LL E++D P +LPE++KI +EVL + W A L+R T ALSK + +++GE+A +S + +H P R+++ W +YQW+DLC M+LE+V S++ +FA + G+K Y++L GL R+L D+STGT HSD+ PGDV+G+ VLDGV R T VAV+ ++ DY VRD G S +S+DDK LK V +++ Y +Y+IALL + E KD+ I+++GEAS L+FI SGT EVTQS++ + EE A + RRVLA+LE+GE+ GESG++ + GG G G PI E FS+VA T V+ L+LR +HY II+ LE++R+ HAVR WR RK EA+R+R V+RA L E A +GG +D
Sbjct: 512 GKPGNSFYIIVEGVCKVTVHDPSVPGQQREVTKLHASDFFGEVALIEKSMRTASVVAETVVRCLSLTRRHFETHLSGIKXXXXXXXXXXXXXXXXXXXXXATLMEHSATKQLMAGEGNDDDAND------LFHPIE-----------------------EEGG-------------TAAKKASKPSTARRQSMRSFQGIAMHVLKLQNRKQ-------GTFARHPPYIE-----QHRGAAQHQRAPSAAAPEDDDAPRQRL-STNARRKASQDA----MDCGPGAWLTKRVA----YAHSADVYQQLLAELVDHPANLPEHSKIMAEVLHKSVGEWAHAVELLRATVTSALSKRHSHVTEGEVAAVSAVXXXXXXXXXXXXXVRPALRHNKXXXXXXXXXXXXXXXXXXMRPALRRKYAKGWPDYQWLDLCRHMQLEQVESMETIFAAESQGSKAYLVLTGLVRLLERVVDDSTGTARLVYHSDLCPGDVLGDGVLDGVRTRHHTAVAVSRATLLSVDVEDYLRVRDHGVSLLSVDDKFHFLKQVPLLKGMEMYRIYRIALLARLEEYPKDTWIVRSGEASRGLFFIYSGTAEVTQSKEGEAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDAEERAM----HAVRGRRRVLAILEAGEHLGESGLLQAASVGGWGXXXXXXXXXXXXXXXXXXXXGKREPITESFSVVARTTVQALVLRARHYAIIDANTLELVRSAHAVRALWRRARKKEAHRARGVVRAXXXRLREQARALREGGAADAD 1232
BLAST of mRNA_D-dichotoma_M_contig1080.700.1 vs. uniprot
Match: D7G8M0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8M0_ECTSI) HSP 1 Score: 229 bits (584), Expect = 2.420e-61 Identity = 168/373 (45.04%), Postives = 207/373 (55.50%), Query Frame = 3
Query: 1455 SVGIMRMSSTYHLYKIALLVKQTEAAKDSIILQAGEASGALYFIVSGTVEVTQSRKRRLTNQ---NGGVLAVASESGKERPAVVGVAGR------------EEDLSPREEGVGGGGGFAPKTSRRVLAVLESGEYFGESGVITYFNGGGRGPGGPPPIVEQFSLVASTHVELLLLRRKHYNIIEMQMLEMLRANHAVRVRWRAHRKSEAYRSRAVLRAAKRALDEAAA-VRHQGGYITSDAQXXXXXXXXXXXXXXHHVNVTRARDLCLPHDEHMEIPALALDTGRALATMS----WRPPLPHSDVPWDAAVLGTEGDVPAYDELSR-------------GGAT----GGADDASLSGLTVMSGESMAYSSDS 2462
SV +MRMSSTYHLYKIALLVK +A KDS+IL+AGE S ALYF+VSGTVEV Q +++R+ NQ N G A +G ++ V+G E+ PRE G F KT+RRVL VLESGEYFGESGV+TYFNGG + PP+ EQF LVA T VE+L+LRR+H+NII M MLE+++ANHA R++WRA RK +A+R RAVLRAAKRAL +AAA V + I Q N ++ P DE LA R T S W LP + + GD+ A D GG GG DD SL+GL+V SG+SM YS DS
Sbjct: 5 SVAMMRMSSTYHLYKIALLVKTDDAVKDSMILRAGEPSKALYFVVSGTVEVIQLKRKRVRNQAPLNTGAGKAAGSNGNKKTCNTVVSGGGXXXXXXXXGKPEKPDIPREGD--GAAEFVYKTARRVLTVLESGEYFGESGVLTYFNGGSKSSAAAPPVTEQFCLVARTSVEMLVLRRQHFNIIAMPMLEIIKANHAARLQWRAQRKQDAHRGRAVLRAAKRALGQAAARVGGEEDPIFQSCQKQLVNSQSRTAATSAAGNSSQGARPSAPADEGRNTSLLAQRQERGSVTKSHSSGWST-LPRGEPSFAKHHHHPPGDLGANDLAGTVVSMTWGAGRNPMGGEEEHQDGGGDDKSLAGLSVASGDSMQYSVDS 374
BLAST of mRNA_D-dichotoma_M_contig1080.700.1 vs. uniprot
Match: A0A7S2G2W4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G2W4_9STRA) HSP 1 Score: 130 bits (327), Expect = 4.150e-27 Identity = 73/273 (26.74%), Postives = 138/273 (50.55%), Query Frame = 3
Query: 804 QNLARMMIFALENDMCSTLLNEMIDRPTSLPEYNKITSEVLSPDLSHWGLAYSLIRDTAHRALSKGRAKLSDGELAVMSGMFRKHPLFRQRHCVDWLEYQWMDLCTRMRLEEVRSLKKVFAHGAHGTKCYILLRGLARVLLPHEDESTGTIHYRPHSDMGPGDVMGESVLDGVHVRPSTVVAVTDCQFAVIEESDYTTVRDRGHSQMSLDDKCFHLKSVGIMRMSSTYHLYKIALLVKQTEAAKDSIILQAGEASGALYFIVSGTVEVTQSRK 1622
+NLA ++ D L+NE++ PT + +Y + + + + L + L+ +AL+K + SD +L+++ G+ ++ ++++C W +YQ+ DLC + E ++ ++ + A GT +I+LRG + + TG + PG G++ L G+++R T A +D E+ +Y + D GHS +S+D K L+ + + R Y LY++A ++ Q + +L+ G S ALYFI+ G+V + RK
Sbjct: 459 RNLANLIAKNYGTDSFQRLVNEVLRSPTHMNKYGAACTAIFLSNNREFSLKH-LLHQQFVKALAKPHFERSDSDLSMVVGITKQKNQLQEKYCAAWPQYQYADLCRHFQYREYKADDVIYDYNARGTTIFIVLRGTVSLTKQVVSKDTGNKERVFIRHVSPGGCFGDAALAGMNMREYTARATSDVICVDFEQIEYQKIVDHGHSTISVDAKFQFLRKLSLFRSWELYRLYRLAFVMDQQVVNRGETVLEQGVVSNALYFILRGSVNIQIQRK 730
BLAST of mRNA_D-dichotoma_M_contig1080.700.1 vs. uniprot
Match: A0A3N5TT75_9ACTN (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A3N5TT75_9ACTN) HSP 1 Score: 62.8 bits (151), Expect = 9.580e-8 Identity = 32/71 (45.07%), Postives = 48/71 (67.61%), Query Frame = 3
Query: 3 GKPGSSFHIITAGRCRVMIHDPNAPGQQREVTKLHQDDFFGEVALMEKGLRTATVIAETEVTTLSLTRRHF 215
G+PG +F++I G +V D N R +++L DFFGE++LM+ G RTATV+AET +T L+L+R+ F
Sbjct: 45 GEPGDAFYVIVQGEAKVK--DRNG----RTLSRLIPGDFFGEISLMDGGPRTATVVAETNLTALALSRQDF 109
BLAST of mRNA_D-dichotoma_M_contig1080.700.1 vs. uniprot
Match: A0A1R2C6E6_9CILI (Uncharacterized protein n=2 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2C6E6_9CILI) HSP 1 Score: 65.9 bits (159), Expect = 3.250e-7 Identity = 54/213 (25.35%), Postives = 96/213 (45.07%), Query Frame = 3
Query: 984 RALSKGRAKLSDGELAVMSGMFRKHPLFRQRHCVDWL-EYQWMDLCTRMRLEEVRSLKKVFAHGAHGTKCYILLRGLARVLLPH-EDESTGTIHYRPHSDMGPGDVMGESVLDGVHVRPSTVVAVTDCQFAVIEESDYTTVRDRGHSQMSLDDKCFHLKSVGIMRMSSTYHLYKIALLVKQTEAAKDSIILQAGEASGALYFIVSGTVEVTQS 1616
+ LS G+ + +L ++ + RK F Q+ ++ L E D C M E V + + VF G G K YI+L G+A+V++P +D+ I + + G GE L R ++++ DC FAV+ + DY + + S++ LD LK + + L K+ + + ++ +Y + SG E+T+S
Sbjct: 32 KLLSLGKLHRNSKQLLIIQALTRKVKFFIQK--IEELGEAIHYDCCKAMMYEFVPNGEYVFKCGEKGNKFYIILEGIAKVIVPIIKDDIVNMITV---AQLYSGMAFGELALIKDQPRSASILCAKDCHFAVLVKEDYLKILGKAESRI-LDMNIDFLKGIPYFTKWTKKKLEKLTYYFSPLKFMRKQVVFSVQGQPKYVYIVKSGEFELTKS 238
BLAST of mRNA_D-dichotoma_M_contig1080.700.1 vs. uniprot
Match: A0A1Q7PIK8_9BACT (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Terrabacteria group TaxID=1783272 RepID=A0A1Q7PIK8_9BACT) HSP 1 Score: 58.2 bits (139), Expect = 3.390e-6 Identity = 32/67 (47.76%), Postives = 40/67 (59.70%), Query Frame = 3
Query: 3 GKPGSSFHIITAGRCRVMIHDPNAPGQQREVTKLHQDDFFGEVALMEKGLRTATVIAETEVTTLSLT 203
G+ G F +IT G V + R T+L DFFGE++L++ G RTATV AETEVTTL LT
Sbjct: 40 GQSGLGFFLITDGTAGVKVGG-------RTATRLGSGDFFGEISLLDGGPRTATVTAETEVTTLGLT 99
BLAST of mRNA_D-dichotoma_M_contig1080.700.1 vs. uniprot
Match: A0A350M0T5_9BACT (Cyclic nucleotide-binding domain-containing protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A350M0T5_9BACT) HSP 1 Score: 57.8 bits (138), Expect = 5.430e-6 Identity = 35/98 (35.71%), Postives = 53/98 (54.08%), Query Frame = 3
Query: 3 GKPGSSFHIITAGRCRVMIHDPNAPGQQREVTKLHQDDFFGEVALMEKGLRTATVIAETEVTTLSLTRRHFDIYLK--PIKAAILESAAAKEILDMRE 290
G+ G F+II +G V+I G+ + + L DFFGE+AL+ RTA+V+A T+V T++L ++ F+ LK P AA L + M E
Sbjct: 47 GETGDYFYIIKSGEADVIIE-----GEDKRIAHLKDGDFFGEIALLVGVERTASVVATTDVVTITLNKKGFNELLKENPSVAANLSKVLVLRLSKMAE 139
BLAST of mRNA_D-dichotoma_M_contig1080.700.1 vs. uniprot
Match: A0A2D8G3F3_9PROT (Cyclic nucleotide-binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2D8G3F3_9PROT) HSP 1 Score: 57.4 bits (137), Expect = 8.650e-6 Identity = 30/71 (42.25%), Postives = 46/71 (64.79%), Query Frame = 3
Query: 3 GKPGSSFHIITAGRCRVMIHDPNAPGQQREVTKLHQDDFFGEVALMEKGLRTATVIAETEVTTLSLTRRHF 215
G PG + +II G+ V+I+ PN + V K+ ++DF GE+A++ RTAT+ AETE+TTL L++ F
Sbjct: 46 GDPGDAAYIILDGKAEVLINTPNG---ELAVAKVGKNDFVGEIAILIXVPRTATIRAETELTTLVLSKDLF 113
BLAST of mRNA_D-dichotoma_M_contig1080.700.1 vs. uniprot
Match: A0A537VXL4_9ACTN (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A537VXL4_9ACTN) HSP 1 Score: 57.0 bits (136), Expect = 9.840e-6 Identity = 30/71 (42.25%), Postives = 46/71 (64.79%), Query Frame = 3
Query: 3 GKPGSSFHIITAGRCRVMIHDPNAPGQQREVTKLHQDDFFGEVALMEKGLRTATVIAETEVTTLSLTRRHF 215
G G FH++ GR RV+++ G++R+ + FFGE++L+++G RTATV AET VTTLS+ + F
Sbjct: 46 GDEGIGFHMVIKGRARVIVN-----GRKRDT--IGPGGFFGELSLIDRGPRTATVTAETAVTTLSVAQWQF 109 The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1080.700.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dichotoma_M_contig1080.700.1 >prot_D-dichotoma_M_contig1080.700.1 ID=prot_D-dichotoma_M_contig1080.700.1|Name=mRNA_D-dichotoma_M_contig1080.700.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=1100bp MIHDPNAPGQQREVTKLHQDDFFGEVALMEKGLRTATVIAETEVTTLSLTback to top mRNA from alignment at D-dichotoma_M_contig1080:60537..113513+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dichotoma_M_contig1080.700.1 ID=mRNA_D-dichotoma_M_contig1080.700.1|Name=mRNA_D-dichotoma_M_contig1080.700.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=52977bp|location=Sequence derived from alignment at D-dichotoma_M_contig1080:60537..113513+ (Dictyota dichotoma ODC1387m male)back to top Coding sequence (CDS) from alignment at D-dichotoma_M_contig1080:60537..113513+ >mRNA_D-dichotoma_M_contig1080.700.1 ID=mRNA_D-dichotoma_M_contig1080.700.1|Name=mRNA_D-dichotoma_M_contig1080.700.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=6600bp|location=Sequence derived from alignment at D-dichotoma_M_contig1080:60537..113513+ (Dictyota dichotoma ODC1387m male)back to top |