prot_D-dichotoma_M_contig108.694.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig108.694.1
Unique Nameprot_D-dichotoma_M_contig108.694.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length866
Homology
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BLAST of mRNA_D-dichotoma_M_contig108.694.1 vs. uniprot
Match: D8LC76_ECTSI (Possible CAMK/ Leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC76_ECTSI)

HSP 1 Score: 129 bits (324), Expect = 1.040e-26
Identity = 285/419 (68.02%), Postives = 324/419 (77.33%), Query Frame = 0 
Query:  123 QSSEGLARIVKMVATPARTKPSKALCTSKFLQLFASAASAQESYAVLACVHKQMNGQGWERRGGWGSYLVRKSQAELDDGRVYGVKSDNGLVVALLLKSNNMRGRIPPILARLGSLKCMNFADNHISGSIPGELGFLLQLEILQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPPRYDAE--RQAG-----GLRSLDLGKNNLDAPFPDLAGLSDLRSLELDNNQVFGTLEGSISQSCPNLFRLHLQNNRLDGEIPASLGSLSRLEIL 534
            QS EG + + K+       +      + K+L+LFA + SA ++Y VLA +H++MNG GW RRGGW SYLVR+S+AELD+GRVYGV+S  G V  L+L SNN+ GRIPPI+ARL SL                             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   P ++     R +G     G+RSL+LG N ++ PFPDL G+  L+SL LD N+++G L  S++++CPNL+RL LQ NRL GEIP SLG L++LE L
Sbjct:  398 QSDEGRSMMEKLTKVTVAVESPATKISRKYLKLFAPSNSAHDTYKVLAALHRRMNGTGWPRRGGWDSYLVRRSRAELDEGRVYGVRSKEGSVEYLILSSNNVCGRIPPIIARLESLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQFPVKFQFWFLRSSGATGGSGMRSLNLGSNEVEEPFPDLQGMEQLQSLVLDQNRMYGGLTESLAETCPNLYRLSLQKNRLSGEIPHSLGMLTKLEHL 816
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BLAST of mRNA_D-dichotoma_M_contig108.694.1 vs. uniprot
Match: A0A2P6SQ79_ROSCH (Putative non-specific serine/threonine protein kinase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6SQ79_ROSCH)

HSP 1 Score: 53.5 bits (127), Expect = 2.930e-5
Identity = 25/67 (37.31%), Postives = 42/67 (62.69%), Query Frame = 0 
Query:  467 NNLDAPFPDLAGLSDLRSLELDNNQVFGTLEGSISQSCPNLFRLHLQNNRLDGEIPASLGSLSRLEI 533
            N L+   P  +G  ++ ++EL NN++ GT+  +  ++   L  L L +N+LDG IPASL SL R+++
Sbjct:    4 NKLEGSIPSFSGAKNVHTIELSNNRLTGTINSTHWRNLTKLSSLCLNSNKLDGNIPASLFSLPRIDL 70
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig108.694.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LC76_ECTSI1.040e-2668.02Possible CAMK/ Leucine rich repeat protein n=2 Tax... [more]
A0A2P6SQ79_ROSCH2.930e-537.31Putative non-specific serine/threonine protein kin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 479..503
e-value: 180.0
score: 3.0
coord: 307..330
e-value: 100.0
score: 5.0
coord: 696..720
e-value: 29.0
score: 9.5
coord: 283..306
e-value: 57.0
score: 7.1
coord: 600..624
e-value: 36.0
score: 8.7
coord: 355..379
e-value: 61.0
score: 6.8
coord: 403..427
e-value: 18.0
score: 11.2
coord: 648..672
e-value: 44.0
score: 8.0
coord: 576..599
e-value: 390.0
score: 0.2
coord: 528..552
e-value: 47.0
score: 7.7
coord: 331..354
e-value: 10.0
score: 13.2
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 316..368
e-value: 1.4E-7
score: 31.1
coord: 603..661
e-value: 7.8E-8
score: 32.0
coord: 505..565
e-value: 9.2E-8
score: 31.7
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 451..628
e-value: 1.1E-47
score: 164.6
coord: 208..450
e-value: 4.9E-63
score: 215.3
coord: 629..772
e-value: 6.8E-43
score: 148.7
NoneNo IPR availablePANTHERPTHR27008:SF193coord: 379..559
coord: 670..771
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 551..690
coord: 214..390
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 379..559
NoneNo IPR availablePANTHERPTHR27008:SF193coord: 331..445
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 459..596
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 670..771
coord: 331..445
NoneNo IPR availablePANTHERPTHR27008:SF193coord: 214..390
coord: 551..690
coord: 459..596
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 211..445
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 397..758

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig108contigD-dichotoma_M_contig108:527453..535817 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig108.694.1mRNA_D-dichotoma_M_contig108.694.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig108 527453..536077 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig108.694.1 ID=prot_D-dichotoma_M_contig108.694.1|Name=mRNA_D-dichotoma_M_contig108.694.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=866bp
MANSVGTVPDLDGKITEGITHVQVFSASTSSNGAADGAQLAQSAPDHSYE
STKPTTPQIEMSRQQVSNPVAARFAALVKAGPSLGLKPEETQDIANLGNS
TNATQASRQDDEKEATDSTKKKQSSEGLARIVKMVATPARTKPSKALCTS
KFLQLFASAASAQESYAVLACVHKQMNGQGWERRGGWGSYLVRKSQAELD
DGRVYGVKSDNGLVVALLLKSNNMRGRIPPILARLGSLKCMNFADNHISG
SIPGELGFLLQLEILQLQENNLRDGISPLLGSLTNLIRLSLGSNKLTGHL
PDSLGSLASLQHLSVENNRLAGCIPAMFCRLSSLETLNLSNNRLEGEIPS
GIGDMAMLRKLDLQQNLLMGAIPDSVCSLRHLTWLHLNGNQLTGPIPTPL
GELTSLLVLNLGHNNLVGPLPPAIGEPGHLVCVSMRGNALEGPFPLPPRY
DAERQAGGLRSLDLGKNNLDAPFPDLAGLSDLRSLELDNNQVFGTLEGSI
SQSCPNLFRLHLQNNRLDGEIPASLGSLSRLEILDLSGNSFQGGIPSELE
ALKQLRFLSASNNQLGGDLPSFLGSMSSLRRLALDGNKFAGSVPPELGML
NDLRRLYLERNHLEGEIPSSLSKCRLMEELYLHQNALSGKIPESLRSLKN
LRYLYLYQNRLTGPVPEWLGELPHLHGLVLGENELKGHIPWQLGHLHELE
DLYLNDNRLEGGIPERLVNCERLQTLHLGGNNLTGCVPRYLRNIPDLQEL
NVERNNLSGELPIPLFLKSSLGPGAEGFKYDGNPRLVDSREHFASTVAGI
HSARAKAPKAADSNSVTPAPSPSPTLASAPAPTVPAPTPSAPASASASAP
APPGVPSDQSCASTKE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf