prot_D-dichotoma_M_contig1078.681.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig1078.681.1
Unique Nameprot_D-dichotoma_M_contig1078.681.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length218
Homology
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BLAST of mRNA_D-dichotoma_M_contig1078.681.1 vs. uniprot
Match: D7FXS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXS4_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 5.810e-14
Identity = 38/46 (82.61%), Postives = 43/46 (93.48%), Query Frame = 0 
Query:  173 EADFFEVESTWVNITLTAVCVVCAGLAAGLTMGLVSIEPLEMAIKQ 218
            E DF ++ESTWVNI +T+VCVVCAGLAAGLTMGL+SIEPLEMAIKQ
Sbjct:  197 EEDFLQIESTWVNIAMTSVCVVCAGLAAGLTMGLLSIEPLEMAIKQ 242
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BLAST of mRNA_D-dichotoma_M_contig1078.681.1 vs. uniprot
Match: A0A6H5KPI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPI7_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 6.210e-14
Identity = 38/46 (82.61%), Postives = 43/46 (93.48%), Query Frame = 0 
Query:  173 EADFFEVESTWVNITLTAVCVVCAGLAAGLTMGLVSIEPLEMAIKQ 218
            E DF ++ESTWVNI +T+VCVVCAGLAAGLTMGL+SIEPLEMAIKQ
Sbjct:  194 EEDFLQIESTWVNIAMTSVCVVCAGLAAGLTMGLLSIEPLEMAIKQ 239
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1078.681.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXS4_ECTSI5.810e-1482.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KPI7_9PHAE6.210e-1482.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..182
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 210..218
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 183..209
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.831
NoneNo IPR availableTMHMMTMhelixcoord: 186..208

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig1078contigD-dichotoma_M_contig1078:216702..219274 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig1078.681.1mRNA_D-dichotoma_M_contig1078.681.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig1078 216561..219274 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig1078.681.1 ID=prot_D-dichotoma_M_contig1078.681.1|Name=mRNA_D-dichotoma_M_contig1078.681.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=218bp
MGLGVLVFSLFAVGLIPGCNSEPSAPAVERDVATNPLKDVVQDIILAHHY
PYASRADDDPELERSHAAAGSLAEEIIVALRAEFCPPTGLSDSEPALRRS
ELIELGLIVPTAGGETAGVELRPSPVAVGAEDTRAGSSSERRTLGNGTGG
DRERRITDEDVAPPERRSRFLSEADFFEVESTWVNITLTAVCVVCAGLAA
GLTMGLVSIEPLEMAIKQ
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