prot_D-dichotoma_M_contig106.555.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig106.555.1
Unique Nameprot_D-dichotoma_M_contig106.555.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length277
Homology
BLAST of mRNA_D-dichotoma_M_contig106.555.1 vs. uniprot
Match: D8LNJ2_ECTSI (Hlip n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNJ2_ECTSI)

HSP 1 Score: 197 bits (502), Expect = 2.490e-59
Identity = 124/278 (44.60%), Postives = 166/278 (59.71%), Query Frame = 0
Query:    1 MHLSSTLAVAIALASAMQVSTFAFVSSGTPTMRAIGVVRRKNSCVRPRGSVLGAKKGGELEDIMDEVAGRSEVAQNEGIGSELPDEV--NSAASAVAAPSIKSKRRXXXXXXXXXXXXXXKVEPSWEDIKTKVARSTATRAPTQKAVKADEEEIIVPMHAGAVPLPPGKIAVNPMEGMDAVDVPGKIVLDPQTLVEQQQGLEKIAQQLRRERLDREAEESVAFGFCPKAELFNGRSAMFGITVGLLTEYWTGQSIPQQVETMIQVLGLVPLDYESYFS 276
            M LS+++A+ +   S +QVS+FAFV  G             +      GS    + G  L  +          A  EG GS+  +E   +  +SAVA    K KR               KV P  +D+ +++A             ++D+E I++P  AG  P+ PG I  +P+ GMD  D+PGKIVL P+ L EQQ+GLEKIAQQLRRERLD+EAE+++ FGFCP+AEL+NGRSAMFGITVG+LTEYWTGQSIPQQ+ET  Q+LGL+PLDY++YF 
Sbjct:    1 MRLSASVALGVGCVSVVQVSSFAFVPLGATPSGCTSCTAHSSQATSGSGSSSRVRPGRLLVALS--------AADGEG-GSDSGEETADDDTSSAVAT---KPKR---------------KVNPELDDLVSEMAG------------RSDDEPIVIPRGAGIAPMAPGPIKPDPIPGMDDDDIPGKIVLPPEVLAEQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRSAMFGITVGMLTEYWTGQSIPQQIETFAQLLGLLPLDYDTYFQ 239          
BLAST of mRNA_D-dichotoma_M_contig106.555.1 vs. uniprot
Match: A0A836CEG8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEG8_9STRA)

HSP 1 Score: 130 bits (326), Expect = 7.360e-34
Identity = 70/103 (67.96%), Postives = 83/103 (80.58%), Query Frame = 0
Query:  174 EGMDAVD-VPGKIVLDPQTLVEQQQGLEKIAQQLRRERLDREAEESVAFGFCPKAELFNGRSAMFGITVGLLTEYWTGQSIPQQVETMIQVLGLVPLDYESYF 275
            EG+ A D VPGKIV+D  TL +QQ  LEK A+QLRR+RLDREAEE+   G+ P AE+ NGR+AMF I VG+LTEYWTGQS+PQQVETM  V+GL+PLDYES F
Sbjct:   65 EGIIADDNVPGKIVVDDATLAQQQIDLEKYARQLRRQRLDREAEEARLLGWTPAAEINNGRAAMFFIVVGILTEYWTGQSMPQQVETMASVMGLLPLDYESMF 167          
BLAST of mRNA_D-dichotoma_M_contig106.555.1 vs. uniprot
Match: A0A7V5I693_9BACT (Uncharacterized protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V5I693_9BACT)

HSP 1 Score: 88.6 bits (218), Expect = 3.270e-18
Identity = 41/87 (47.13%), Postives = 61/87 (70.11%), Query Frame = 0
Query:  181 VPGKIVLDPQTLVEQQQGLEKIAQQLRRERLDREAEESVAFGFCPKAELFNGRSAMFGITVGLLTEYWTGQSIPQQVETMIQVLGLV 267
            VPG+  L    L EQ++ L  +A++ +  RL +EAE    FGFC  AE+ NGR+AMF    G+LTEYWTGQ++PQQ+E ++++LG++
Sbjct:   56 VPGRYKLSAVELAEQRRALRAVAERYKAARLAKEAESRRVFGFCRNAEVINGRTAMFFFVTGMLTEYWTGQTMPQQIELLLRILGII 142          
BLAST of mRNA_D-dichotoma_M_contig106.555.1 vs. uniprot
Match: A0A2V3IG60_9FLOR (Light-harvesting complex-like protein OHP2, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG60_9FLOR)

HSP 1 Score: 89.4 bits (220), Expect = 3.300e-18
Identity = 44/87 (50.57%), Postives = 64/87 (73.56%), Query Frame = 0
Query:  181 VPGKIVLDPQTLVEQQQGLEKIAQQLRRERLDREAEESVAFGFCPKAELFNGRSAMFGITVGLLTEYWTGQSIPQQVETMIQVLGLV 267
            VPGKI LD  T+ +Q+  LE+ +++LR++RL+ E E +  FG+ P AE  NGR AMF +  GLLTEYWTG ++P+QVE M++ LG++
Sbjct:   84 VPGKIQLDELTIAKQRTVLEEYSRELRQKRLEEEREAARIFGWVPYAETLNGRLAMFFLVTGLLTEYWTGYTLPEQVELMLRTLGII 170          
BLAST of mRNA_D-dichotoma_M_contig106.555.1 vs. uniprot
Match: M1V653_CYAM1 (Similar to high light inducible protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1V653_CYAM1)

HSP 1 Score: 88.2 bits (217), Expect = 2.030e-17
Identity = 41/87 (47.13%), Postives = 61/87 (70.11%), Query Frame = 0
Query:  181 VPGKIVLDPQTLVEQQQGLEKIAQQLRRERLDREAEESVAFGFCPKAELFNGRSAMFGITVGLLTEYWTGQSIPQQVETMIQVLGLV 267
            VPG+  L    L EQ++ L  +A++ +  RL +EAE    FGFC  AE+ NGR+AMF    G+LTEYWTGQ++PQQ+E ++++LG++
Sbjct:  119 VPGRYKLSAIELAEQRRALRAVAERYKAARLAKEAESRRVFGFCRNAEVINGRTAMFFFVTGMLTEYWTGQTMPQQIELLLRILGII 205          
BLAST of mRNA_D-dichotoma_M_contig106.555.1 vs. uniprot
Match: A0A6U3SNU5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SNU5_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 2.160e-17
Identity = 45/92 (48.91%), Postives = 63/92 (68.48%), Query Frame = 0
Query:  180 DVPGKIVLDPQTLVEQQQGLEKIAQQLRRERLDREAEESVAFGFCPKAELFNGRSAMFGITVGLLTEYWTGQSIPQQVETMIQVLGLVPLDY 271
            DVPGK+VL+   L  Q   L K+ ++ R+ERL +E +E+   G+  +AE +NGR AMF + VGLLTEYWTG +IP Q+E M++V G +  DY
Sbjct:   88 DVPGKVVLNDVQLAAQVTALSKLEEKWRKERLQKEYDEARLLGWTSQAETYNGRFAMFFLVVGLLTEYWTGVTIPGQIEEMLRVGGFIGPDY 179          
BLAST of mRNA_D-dichotoma_M_contig106.555.1 vs. uniprot
Match: A0A7J7IMA7_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IMA7_9RHOD)

HSP 1 Score: 88.2 bits (217), Expect = 2.890e-17
Identity = 42/94 (44.68%), Postives = 64/94 (68.09%), Query Frame = 0
Query:  175 GMDAVD-VPGKIVLDPQTLVEQQQGLEKIAQQLRRERLDREAEESVAFGFCPKAELFNGRSAMFGITVGLLTEYWTGQSIPQQVETMIQVLGLV 267
            G D ++  PG+  L    L EQ++ +  +A++ + ER+ REAE    FGFC  AE+ NGR+AMF    G+LTEYWTGQ++PQQ+E ++++LG +
Sbjct:  129 GSDRLERAPGRYKLSAAELAEQRRAIRAVAERYKAERIAREAEARRVFGFCRNAEIINGRTAMFFFATGMLTEYWTGQTMPQQIELLLRILGFL 222          
BLAST of mRNA_D-dichotoma_M_contig106.555.1 vs. uniprot
Match: A0A5J4YWB8_PORPP (Light-harvesting complex-like protein OHP2, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YWB8_PORPP)

HSP 1 Score: 86.7 bits (213), Expect = 2.940e-17
Identity = 53/143 (37.06%), Postives = 80/143 (55.94%), Query Frame = 0
Query:  125 EDIKTKVARSTATRAPTQKAVKADEEEIIVPMHAGAVPLPPGKIAVNPMEGMDAVDVPGKIVLDPQTLVEQQQGLEKIAQQLRRERLDREAEESVAFGFCPKAELFNGRSAMFGITVGLLTEYWTGQSIPQQVETMIQVLGLV 267
            ED+ ++   S   R  T+  + A+ E+       GA  +   K        +     PG   L P  L EQ++ L  ++++ + ER+DRE E+S  FG   +AE+ NGR AMF +  GLLTEYWTG++IP+QVET+ + LGL+
Sbjct:   29 EDVSSRACVSAPRRHTTRLQMAAEVED-------GATEVASSKAKEENNSQLYEGPGPGMRELTPAELAEQKKVLVALSEEWKAERMDREFEQSRLFGLTRRAEILNGRVAMFFLATGLLTEYWTGENIPEQVETLFRTLGLI 164          
BLAST of mRNA_D-dichotoma_M_contig106.555.1 vs. uniprot
Match: A0A7S2P2S9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P2S9_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 4.710e-17
Identity = 41/91 (45.05%), Postives = 65/91 (71.43%), Query Frame = 0
Query:  180 DVPGKIVLDPQTLVEQQQGLEKIAQQLRRERLDREAEESVAFGFCPKAELFNGRSAMFGITVGLLTEYWTGQSIPQQVETMIQVLGLVPLD 270
            +VPGK+V++   L +Q   L ++ ++ R+ER+ +E E+    G+ P+AE++NGR AMF + VGLLTEYWTG +IP Q+E M++V G + +D
Sbjct:   65 NVPGKVVMNEIDLAKQVSALNQLEEKWRKERVYKEYEDKALLGWTPQAEMYNGRFAMFFLVVGLLTEYWTGVTIPGQIEEMLRVGGFIDVD 155          
BLAST of mRNA_D-dichotoma_M_contig106.555.1 vs. uniprot
Match: A0A7S2MZX0_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MZX0_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 5.710e-17
Identity = 45/92 (48.91%), Postives = 62/92 (67.39%), Query Frame = 0
Query:  180 DVPGKIVLDPQTLVEQQQGLEKIAQQLRRERLDREAEESVAFGFCPKAELFNGRSAMFGITVGLLTEYWTGQSIPQQVETMIQVLGLVPLDY 271
            DVPGK+VL+   L  Q   L K+ ++ R+ERL  E +E+   G+  +AE +NGR AMF + VGLLTEYWTG +IP Q+E M++V G +  DY
Sbjct:   87 DVPGKVVLNDVQLAAQVTALSKLEEKWRKERLQTEYDEARLLGWTSQAETYNGRFAMFFLVVGLLTEYWTGVTIPGQIEEMLRVGGFIGPDY 178          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig106.555.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNJ2_ECTSI2.490e-5944.60Hlip n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNJ2_EC... [more]
A0A836CEG8_9STRA7.360e-3467.96Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7V5I693_9BACT3.270e-1847.13Uncharacterized protein n=1 Tax=bacterium TaxID=18... [more]
A0A2V3IG60_9FLOR3.300e-1850.57Light-harvesting complex-like protein OHP2, chloro... [more]
M1V653_CYAM12.030e-1747.13Similar to high light inducible protein n=1 Tax=Cy... [more]
A0A6U3SNU5_9STRA2.160e-1748.91Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7J7IMA7_9RHOD2.890e-1744.68Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A0A5J4YWB8_PORPP2.940e-1737.06Light-harvesting complex-like protein OHP2, chloro... [more]
A0A7S2P2S9_9STRA4.710e-1745.05Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2MZX0_9STRA5.710e-1748.91Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33401:SF1LIGHT-HARVESTING COMPLEX-LIKE PROTEIN OHP2, CHLOROPLASTICcoord: 95..265
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..276
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.757
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 220..257
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
IPR037492Light-harvesting complex-like protein OHP2PANTHERPTHR33401FAMILY NOT NAMEDcoord: 95..265

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig106contigD-dichotoma_M_contig106:190623..199755 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig106.555.1mRNA_D-dichotoma_M_contig106.555.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig106 190568..201056 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig106.555.1 ID=prot_D-dichotoma_M_contig106.555.1|Name=mRNA_D-dichotoma_M_contig106.555.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=277bp
MHLSSTLAVAIALASAMQVSTFAFVSSGTPTMRAIGVVRRKNSCVRPRGS
VLGAKKGGELEDIMDEVAGRSEVAQNEGIGSELPDEVNSAASAVAAPSIK
SKRRSSELDDIMSEVAARKVEPSWEDIKTKVARSTATRAPTQKAVKADEE
EIIVPMHAGAVPLPPGKIAVNPMEGMDAVDVPGKIVLDPQTLVEQQQGLE
KIAQQLRRERLDREAEESVAFGFCPKAELFNGRSAMFGITVGLLTEYWTG
QSIPQQVETMIQVLGLVPLDYESYFS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037492OHP2