prot_D-dichotoma_M_contig929.20032.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig929.20032.1
Unique Nameprot_D-dichotoma_M_contig929.20032.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length287
Homology
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BLAST of mRNA_D-dichotoma_M_contig929.20032.1 vs. uniprot
Match: D8LNX1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNX1_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 3.350e-11
Identity = 44/93 (47.31%), Postives = 50/93 (53.76%), Query Frame = 0 
Query:   24 EEDPHLHALECDGSSGGFDEGFNELARAPRRMVAAKLPRKPRTRDRRRVQLKPNLRGPRDRGGHLIVPTVFRKHLPPPPFGETMGHGLKLRRD 116
            E+DPHL   +  G+ G                    LPRK  ++ RR V  KP LR PRDRG    +PTV RKHLPPPP GETMGHGL   RD
Sbjct:  626 EDDPHLRLFKEGGNIGXXXXXXXXXXXX----XXXXLPRKRGSKQRRGVLAKPELRRPRDRGTQPPIPTVTRKHLPPPPLGETMGHGLSPPRD 714
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BLAST of mRNA_D-dichotoma_M_contig929.20032.1 vs. uniprot
Match: A0A6H5KSZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ6_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 4.450e-10
Identity = 37/57 (64.91%), Postives = 40/57 (70.18%), Query Frame = 0 
Query:   60 LPRKPRTRDRRRVQLKPNLRGPRDRGGHLIVPTVFRKHLPPPPFGETMGHGLKLRRD 116
            LPRK  ++ RR V  KP LR PRDRG    +PTV RKHLPPPP GETMGHGL   RD
Sbjct:  473 LPRKRGSKQRRGVLAKPELRRPRDRGTQPPIPTVKRKHLPPPPLGETMGHGLSPPRD 529
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig929.20032.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LNX1_ECTSI3.350e-1147.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KSZ6_9PHAE4.450e-1064.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig929contigD-dichotoma_M_contig929:138829..143015 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig929.20032.1mRNA_D-dichotoma_M_contig929.20032.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig929 138221..143021 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig929.20032.1 ID=prot_D-dichotoma_M_contig929.20032.1|Name=mRNA_D-dichotoma_M_contig929.20032.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=287bp
MRRGARSRNKSRVPGRARQARSPEEDPHLHALECDGSSGGFDEGFNELAR
APRRMVAAKLPRKPRTRDRRRVQLKPNLRGPRDRGGHLIVPTVFRKHLPP
PPFGETMGHGLKLRRDDKTRSKVRVAPGVASTVRHPDKYDEGEQPQQRTH
QQQASALSGDGPHESETPQQSQPPCLETLKSRVTGTSPLLQPEQGSNPRW
RSGQEHEHGTEGHHRQLISVHPQEGQIFRDRGRYRRRRQRDRGGDEGLIR
SERSPETIQALMRIDEKTPARHHNLRCPHEIEGQKR*
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