prot_D-dichotoma_M_contig928.20012.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig928.20012.1
Unique Nameprot_D-dichotoma_M_contig928.20012.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length108
Homology
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BLAST of mRNA_D-dichotoma_M_contig928.20012.1 vs. uniprot
Match: D8LR74_ECTSI (Vacuolar protein 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR74_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 8.900e-9
Identity = 53/138 (38.41%), Postives = 64/138 (46.38%), Query Frame = 0 
Query:    2 NGGIAALTKLSRSEESRTRLSCAQGGVACLLTVQRAVSS--LGEVCLKTLINLSCARGASEVKTDELNDA-----------------------ALQ--------LAPTGETDEYLEVLLIQFLCNLSGFRNNQHKLGE 106
            NGG+AAL KLSRSEESRTR SCA+  V   L  +R++    + E     +I L+ +                                     A+Q        LA T E DE LE LLIQ LCNLSGF+NNQ KL E
Sbjct:  180 NGGVAALAKLSRSEESRTRSSCAE--VFNNLATERSLRQRMIEEGAAPAIIALAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVQRAVPSLGGLAGTVEEDESLERLLIQLLCNLSGFKNNQLKLVE 315
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig928.20012.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LR74_ECTSI8.900e-938.41Vacuolar protein 8 n=1 Tax=Ectocarpus siliculosus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig928contigD-dichotoma_M_contig928:16993..20137 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig928.20012.1mRNA_D-dichotoma_M_contig928.20012.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig928 16993..20137 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig928.20012.1 ID=prot_D-dichotoma_M_contig928.20012.1|Name=mRNA_D-dichotoma_M_contig928.20012.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=108bp
MNGGIAALTKLSRSEESRTRLSCAQGGVACLLTVQRAVSSLGEVCLKTLI
NLSCARGASEVKTDELNDAALQLAPTGETDEYLEVLLIQFLCNLSGFRNN
QHKLGER*
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