prot_D-dichotoma_M_contig927.20005.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_D-dichotoma_M_contig927.20005.1
Unique Name	prot_D-dichotoma_M_contig927.20005.1
Type	polypeptide
Organism	Dictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length	622

Homology

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BLAST of mRNA_D-dichotoma_M_contig927.20005.1 vs. uniprot
Match: D8LM12_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM12_ECTSI)

HSP 1 Score: 450 bits (1157), Expect = 3.960e-148
Identity = 292/635 (45.98%), Postives = 368/635 (57.95%), Query Frame = 0

Query:    1 MVDIWATGRKHVRVSKLYLRALLRRGPNIFVALAWSQQVFWLVLEATAGNESSHSYVRLSSVVCYALALYVGAHFLLLRFHT-----NHHVLEILLDLATDVVGFAWINVAEEVLAQVFRVGAHVALLYCGFAVGASWGAMAIGTCARDCLNWPVDFEETANHFVAGSCALPTSWLITQAVHIALYGFFYRTSARAVDMQVGGRSEEVQVNVHFAASLFLLIYAMFCTIIASRVVGGTIAASAATDSESVP-----------HDGTSTGPRSHGVLRAIEAGGPFSAPLASEVAGASD----GKLEVPRQVHHGDTNVPATTGAASSAFPYPSGRRRRRSAPGDTLDAVDPPTPSNESNELWDSDVEGIGRREKYMERRVDEDGRQAQGKHVVDMVEAEARALGEAVAIAARTRGEALRRGGKTFLRLTLGMMVGWAYNLWGQVEFRQEELEFRYGAAIGAAIYAVISTALGVCIMVRGTDKLDAIGDRSSVLD-SLEESVDADAFDSGGRRVLQLERGRNIGDQGPGLEKTTAS-HAQRMLVVVGGVSLMVGWAWEEAIDLFLEDILGDSTDLGAILAKLALACIATTAVLGGSLRKQQSRNGDLG-ISRAEGVGEVLGGDGREEAQSLMVPLI 612
            M +++A GR+H+++SKLYL+ LL+RGPNIFVALAWSQ  FWL+LEATAGNE S  YVRLSSV CYALAL+ G H LL R+ +     +HH LE LLDL TDVVGFAWINVAEE+LAQVF V A   L+Y   A  AS GAM +G+ AR  L+WPV FEETAN F AGS ALPTSWL+TQ VHI LYGFFYRT+         G  ++V V+V  AASLFLL YA+ C+ +A+RV+GGT+AA                     + G STG RS  V+RAI + G  +A  AS+ A        G +E         ++ P+  G  ++++         R   GD  D      PSN +          +G          D  G +                     A     R ++LRRG K ++RLT+GMMVGWAYNLWGQVEFRQEELEFR+G A+GAA YA +STALGVC+MVRG DKL     R +    ++ +SV        G     +ER    G++    +    S HA+R+LVVVGGVSL+VGWAWEEA DL LE +LGD  D   ++AKL+LA  AT  VLG  +R+   R+   G +    G GE  GG        L+ PL+
Sbjct:    1 MDEVYAKGRRHLKISKLYLKGLLKRGPNIFVALAWSQ-AFWLILEATAGNEDSRGYVRLSSVACYALALHAGGHLLLHRYSSGRRKLSHHALEFLLDLVTDVVGFAWINVAEEMLAQVFEVRAKTTLVYAALAFAASLGAMELGSLARSLLDWPVGFEETANQFDAGSFALPTSWLVTQGVHIGLYGFFYRTAGGQGGRGGDGEEDDV-VDVRLAASLFLLAYALLCSALATRVIGGTVAAXXXXXXXXXXXXXXXXXLTRSNSGGSTGSRSDLVIRAISSYG-VTAAQASDAAXXXXXXXXGDVEA--------SSTPSCGGGRNTSY---------REGGGDVADVG----PSNSTK---------VG----------DGGGERGAAPLAXXXXXXXXXXXXXXAAGGEDARRDSLRRGLKAYMRLTVGMMVGWAYNLWGQVEFRQEELEFRFGPALGAAAYAALSTALGVCVMVRGADKLAGSNRRKNGAGGAVNDSVGGALGSRPGGGYFHVERPEEDGEETRRRDAAVRSYHARRLLVVVGGVSLVVGWAWEEAFDLALEGLLGDEADAATVVAKLSLAVAATVVVLGREVRRAGRRDAGGGDLHDHNGAGEGGGG--------LLEPLV 584

The following BLAST results are available for this feature:

BLAST of mRNA_D-dichotoma_M_contig927.20005.1 vs. uniprot

BLAST of mRNA_D-dichotoma_M_contig927.20005.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LM12_ECTSI	3.960e-148	45.98	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 422..432
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 458..515
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 186..204
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 404..421
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 554..574
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 56..77
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 535..553
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 159..185
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 118..138
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 575..621
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 433..457
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 107..117
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 205..226
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 227..403
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 45..55
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..25
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 78..88
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 89..106
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 516..534
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 26..44
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 139..158
None	No IPR available	TMHMM	TMhelix		coord: 21..43
None	No IPR available	TMHMM	TMhelix		coord: 205..227
None	No IPR available	TMHMM	TMhelix		coord: 162..184
None	No IPR available	TMHMM	TMhelix		coord: 435..457
None	No IPR available	TMHMM	TMhelix		coord: 552..574
None	No IPR available	TMHMM	TMhelix		coord: 520..542
None	No IPR available	TMHMM	TMhelix		coord: 56..78
None	No IPR available	TMHMM	TMhelix		coord: 120..142

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
D-dichotoma_M_contig927	contig	D-dichotoma_M_contig927:141583..147606 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_D-dichotoma_M_contig927.20005.1	mRNA_D-dichotoma_M_contig927.20005.1	Dictyota dichotoma ODC1387m male	mRNA	D-dichotoma_M_contig927 141222..147901 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_D-dichotoma_M_contig927.20005.1 ID=prot_D-dichotoma_M_contig927.20005.1|Name=mRNA_D-dichotoma_M_contig927.20005.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=622bp
MVDIWATGRKHVRVSKLYLRALLRRGPNIFVALAWSQQVFWLVLEATAGN
ESSHSYVRLSSVVCYALALYVGAHFLLLRFHTNHHVLEILLDLATDVVGF
AWINVAEEVLAQVFRVGAHVALLYCGFAVGASWGAMAIGTCARDCLNWPV
DFEETANHFVAGSCALPTSWLITQAVHIALYGFFYRTSARAVDMQVGGRS
EEVQVNVHFAASLFLLIYAMFCTIIASRVVGGTIAASAATDSESVPHDGT
STGPRSHGVLRAIEAGGPFSAPLASEVAGASDGKLEVPRQVHHGDTNVPA
TTGAASSAFPYPSGRRRRRSAPGDTLDAVDPPTPSNESNELWDSDVEGIG
RREKYMERRVDEDGRQAQGKHVVDMVEAEARALGEAVAIAARTRGEALRR
GGKTFLRLTLGMMVGWAYNLWGQVEFRQEELEFRYGAAIGAAIYAVISTA
LGVCIMVRGTDKLDAIGDRSSVLDSLEESVDADAFDSGGRRVLQLERGRN
IGDQGPGLEKTTASHAQRMLVVVGGVSLMVGWAWEEAIDLFLEDILGDST
DLGAILAKLALACIATTAVLGGSLRKQQSRNGDLGISRAEGVGEVLGGDG
REEAQSLMVPLIESTPPVEKS*