prot_D-dichotoma_M_contig927.19996.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig927.19996.1
Unique Nameprot_D-dichotoma_M_contig927.19996.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length209
Homology
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BLAST of mRNA_D-dichotoma_M_contig927.19996.1 vs. uniprot
Match: D8LGY5_ECTSI (C3H1-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGY5_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 1.270e-12
Identity = 42/74 (56.76%), Postives = 48/74 (64.86%), Query Frame = 0 
Query:  100 AATCAFAHGLGELRHPTLDDEAIAGSVTDDSSSCASLDESPAA---------VEERHYERRLPTFVLLGHGNPP 164
            A +CAFAHGLGELRHPTLDDEAIA SV++DS SC S  ++  +         V     ERRLPTFV L  GN P
Sbjct:   51 AGSCAFAHGLGELRHPTLDDEAIARSVSEDSGSCPSSRDTSLSSRCGGVIGRVPHSPCERRLPTFVDLSTGNTP 124
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig927.19996.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LGY5_ECTSI1.270e-1256.76C3H1-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig927contigD-dichotoma_M_contig927:28177..32720 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig927.19996.1mRNA_D-dichotoma_M_contig927.19996.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig927 28177..32720 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig927.19996.1 ID=prot_D-dichotoma_M_contig927.19996.1|Name=mRNA_D-dichotoma_M_contig927.19996.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=209bp
RSSKTDNLNLFRPFIPGHAPGHELEPFCKTWRRGSTTLHRLSLRHVPAGS
GRCEEVGIATKAETWPIRPGYCRDKPQLLCRAPMIYPGTHLWLAAIRLSA
ATCAFAHGLGELRHPTLDDEAIAGSVTDDSSSCASLDESPAAVEERHYER
RLPTFVLLGHGNPPTPRTEAKAIGASSMSNGDGGTPASSSAFWTQNGEQV
ARSDLTRL*
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