prot_D-dichotoma_M_contig926.19995.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig926.19995.1
Unique Nameprot_D-dichotoma_M_contig926.19995.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length62
Homology
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BLAST of mRNA_D-dichotoma_M_contig926.19995.1 vs. uniprot
Match: D7FTH3_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTH3_ECTSI)

HSP 1 Score: 47.8 bits (112), Expect = 2.410e-5
Identity = 21/41 (51.22%), Postives = 28/41 (68.29%), Query Frame = 0 
Query:    1 MSNVKRKRCGHKGCSKCPSFGRQGSKVAEYCRKHAKDRMVN 41
            M ++  KRCGH GC K PS G+ GSK  E C +H+++ MVN
Sbjct:    1 MIDLVSKRCGHPGCMKHPSHGKDGSKRPEICAQHSQEGMVN 41
[Close]
BLAST of mRNA_D-dichotoma_M_contig926.19995.1 vs. uniprot
Match: D8LD34_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD34_ECTSI)

HSP 1 Score: 49.3 bits (116), Expect = 3.130e-5
Identity = 21/39 (53.85%), Postives = 28/39 (71.79%), Query Frame = 0 
Query:    1 MSNVKRKRCGHKGCSKCPSFGRQGSKVAEYCRKHAKDRM 39
            M NV  K CGH GC+K PS+G+ G+K AE+C +HA+  M
Sbjct:    1 MVNVVTKPCGHPGCTKKPSYGKSGTKKAEFCSQHAEPDM 39
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig926.19995.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTH3_ECTSI2.410e-551.22EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LD34_ECTSI3.130e-553.85EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig926contigD-dichotoma_M_contig926:187045..187230 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig926.19995.1mRNA_D-dichotoma_M_contig926.19995.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig926 186886..187230 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig926.19995.1 ID=prot_D-dichotoma_M_contig926.19995.1|Name=mRNA_D-dichotoma_M_contig926.19995.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=62bp
MSNVKRKRCGHKGCSKCPSFGRQGSKVAEYCRKHAKDRMVNLFGTSCGHK
GCSKFPSFGVGG
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