prot_D-dichotoma_M_contig925.19983.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig925.19983.1
Unique Nameprot_D-dichotoma_M_contig925.19983.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length315
Homology
BLAST of mRNA_D-dichotoma_M_contig925.19983.1 vs. uniprot
Match: A0A6H5JJW9_9PHAE (Ribonuclease n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJW9_9PHAE)

HSP 1 Score: 307 bits (786), Expect = 3.740e-100
Identity = 154/233 (66.09%), Postives = 181/233 (77.68%), Query Frame = 0
Query:   97 RTREKRKREEGYGMVIGIDEAGRGPFAGPVVAAACCIPPDVNIPGIKDSKKVTELTDREALYTELTQAPGVRWATAVVDNQRIDEVNILEATKEAMTTCALKLCADAPEGT----------------KPFVFVDGNLIPPGL--SSVDGECVIGGDGLEYCIAAASIIAKVTRDRMMIEFGKRWPVFGFEKHKGYGTQGHRDAIIQHGVVDIHRRSFLRKMEQQLGGKLPLYE 311
            RTRE RK  EG+  VIG+DEAGRGPFAGPVVAAAC IPPDVNI GI+DSKK+T+ +DRE L+ ELT+ PGV WAT+ V + RIDE+NILEATKEAMT C L++C+ + E +                KPFV VDGN  PPGL  + V+ ECV+GGDGLEYCIAAASIIAKVTRDR+MIEFG+RWPVFGFE+HKGYGT  HRDAI +HG+V+IHRRSFL+ ME   GGKL  Y+
Sbjct:  116 RTRENRKLAEGFDAVIGLDEAGRGPFAGPVVAAACMIPPDVNILGIQDSKKITQHSDRETLFKELTETPGVIWATSEVGSSRIDEINILEATKEAMTNCVLEVCSKSVEPSANKGMKTNWKKNASDKKPFVLVDGNFTPPGLGDAKVEAECVVGGDGLEYCIAAASIIAKVTRDRLMIEFGERWPVFGFERHKGYGTAAHRDAIREHGMVEIHRRSFLKNMESS-GGKLAEYK 347          
BLAST of mRNA_D-dichotoma_M_contig925.19983.1 vs. uniprot
Match: D8RCY3_SELML (Ribonuclease (Fragment) n=5 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RCY3_SELML)

HSP 1 Score: 217 bits (553), Expect = 4.340e-67
Identity = 107/185 (57.84%), Postives = 135/185 (72.97%), Query Frame = 0
Query:  111 VIGIDEAGRGPFAGPVVAAACCIPPDVNIPGIKDSKKVTELTDREALYTELTQAPGVRWATAVVDNQRIDEVNILEATKEAMTTCALKLCADAPEGTKPFVFVDGNLIPPGLSSVDGECVIGGDGLEYCIAAASIIAKVTRDRMMIEFGKRWPVFGFEKHKGYGTQGHRDAIIQHGVVDIHRRSF 295
            VIG+DEAGRGP AGPVVAAAC IP DV+I GI DSKK+T    RE LY+++T  PGVR++  VVD  RIDE+NIL+AT EAM TC  +L  +  +   P++ +DGN IP GLS      V+ GD   + IAAASI+AKVTRDR+M ++ KRWP++GF+ HKGYGT  H  A+++HG  DIHRRSF
Sbjct:    3 VIGVDEAGRGPLAGPVVAAACIIPEDVDIQGIDDSKKLTA-EKREQLYSQITSTPGVRFSICVVDAPRIDEINILQATMEAMETCVEELTGNGRDHP-PYILIDGNRIPGGLSGKHARSVVKGDAESHVIAAASILAKVTRDRLMEDYDKRWPLYGFKDHKGYGTASHTAALLKHGPCDIHRRSF 185          
BLAST of mRNA_D-dichotoma_M_contig925.19983.1 vs. uniprot
Match: A0A2K1L292_PHYPA (Ribonuclease n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L292_PHYPA)

HSP 1 Score: 213 bits (541), Expect = 2.250e-63
Identity = 105/191 (54.97%), Postives = 132/191 (69.11%), Query Frame = 0
Query:  105 EEGYGMVIGIDEAGRGPFAGPVVAAACCIPPDVNIPGIKDSKKVTELTDREALYTELTQAPGVRWATAVVDNQRIDEVNILEATKEAMTTCALKLCADAPEGTKPFVFVDGNLIPPGLSSVDGECVIGGDGLEYCIAAASIIAKVTRDRMMIEFGKRWPVFGFEKHKGYGTQGHRDAIIQHGVVDIHRRSF 295
            E G+  V G+DEAGRGP AGPVVAAAC IP    IPG+ DSKK+TE   RE LY ++   PGV +A  VVD  +IDE+NIL+AT  AM+TC  KL  +       ++ +DGN IP  LS  + + VI GD   + IAAASI+AKVTRDRMM+++ +RWPV+GF+ HKGYGT  H  A++ HG  DIHRRSF
Sbjct:  138 ELGFRNVAGVDEAGRGPLAGPVVAAACIIPASATIPGVDDSKKLTE-AQREELYAQIVATPGVAYAIHVVDAAKIDEINILQATLLAMSTCVKKLRKERGGEAPDYILIDGNRIPDELSKEEAQFVIKGDAECHVIAAASILAKVTRDRMMVDYDRRWPVYGFKAHKGYGTAAHIGALLNHGPCDIHRRSF 327          
BLAST of mRNA_D-dichotoma_M_contig925.19983.1 vs. uniprot
Match: A0A2R6XCN5_MARPO (Ribonuclease n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XCN5_MARPO)

HSP 1 Score: 201 bits (511), Expect = 3.230e-59
Identity = 103/190 (54.21%), Postives = 130/190 (68.42%), Query Frame = 0
Query:  107 GYGMVIGIDEAGRGPFAGPVVAAACCIPPDVNIPGIKDSKKVTELTDREALYTELTQAPGVRWATAVVDNQRIDEVNILEATKEAMTTCALKLCADAPEGTKP-FVFVDGNLIPPGLSSVDGECVIGGDGLEYCIAAASIIAKVTRDRMMIEFGKRWPVFGFEKHKGYGTQGHRDAIIQHGVVDIHRRSF 295
            G+  V G+DEAGRGP AGPVVAAAC IP  VNI GI DSKK+TE   RE LY ++T  PG+ +A  VVD   IDEVNIL+AT +AM+ C   L   + E  +P F+ VDGN +P G    +   V+ GD +   IAAASI+AKVTRDR+M+ + K WP +GF+ HKGYGT  H  A++++G  DIHRRSF
Sbjct:  110 GFQHVAGVDEAGRGPLAGPVVAAACIIPSSVNIEGIDDSKKLTE-AKREELYEKITSTPGISYAIHVVDAAIIDEVNILQATMQAMSACVQVLSCASQENPRPDFILVDGNRLPDGFPE-NSRSVVKGDAVCQVIAAASILAKVTRDRLMLSYDKTWPNYGFKAHKGYGTATHMAALLKYGPCDIHRRSF 297          
BLAST of mRNA_D-dichotoma_M_contig925.19983.1 vs. uniprot
Match: A0A1Y1I4C1_KLENI (Ribonuclease n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I4C1_KLENI)

HSP 1 Score: 196 bits (498), Expect = 5.360e-58
Identity = 100/189 (52.91%), Postives = 129/189 (68.25%), Query Frame = 0
Query:  107 GYGMVIGIDEAGRGPFAGPVVAAACCIPPDVNIPGIKDSKKVTELTDREALYTELTQAPGVRWATAVVDNQRIDEVNILEATKEAMTTCALKLCADAPEGTKPFVFVDGNLIPPGLSSVDGECVIGGDGLEYCIAAASIIAKVTRDRMMIEFGKRWPVFGFEKHKGYGTQGHRDAIIQHGVVDIHRRSF 295
            G+  V G+DEAGRGP AGPVVAAAC +PP+  IPG+ DSKKV+E  +R+ LY  +T APGV +A +VVD + ID++NILEA   AM      + AD       F  VDGN IP  L++   + ++GGD L   IAAASIIAKVTRDR+M EF ++WP +GF+ HKGYGT  H + + + G V IHRR+F
Sbjct:   52 GFKRVAGVDEAGRGPLAGPVVAAACILPPNFEIPGVDDSKKVSE-ANRDRLYDIITNAPGVEFAVSVVDVETIDQINILEAAMLAMANAVKLVRAD-------FALVDGNRIPKQLAASVSKAIVGGDALSTSIAAASIIAKVTRDRLMCEFHEQWPEYGFKAHKGYGTAAHMEVLKRLGPVVIHRRTF 232          
BLAST of mRNA_D-dichotoma_M_contig925.19983.1 vs. uniprot
Match: G4Z1P2_PHYSP (Ribonuclease n=4 Tax=Phytophthora TaxID=4783 RepID=G4Z1P2_PHYSP)

HSP 1 Score: 194 bits (492), Expect = 4.400e-57
Identity = 105/199 (52.76%), Postives = 134/199 (67.34%), Query Frame = 0
Query:   97 RTREKRKREEGYGMVIGIDEAGRGPFAGPVVAAACCIPPDVNIPGIKDSKKVTELTDREALYTELTQAPGVRWATAVVDNQRIDEVNILEATKEAMTTCALKLCADAPEGTKPFVFVDGNLIPPGLSSVDGECVIGGDGLEYCIAAASIIAKVTRDRMMIEFGKRWPVFGFEKHKGYGTQGHRDAIIQHGVVDIHRRSF 295
            RT E R + +GY  VIG+DEAGRGP AGPVVAAAC +P DV I G+ DSKK++E   REAL+  LT  P + +A  V   QRIDE+NIL+A+ E+MT  A ++     +  K FV VDGN +PP L  +  E V+ GD   Y IAAASIIAKVTRDR+M E+ +++P +G  KHKGY T+ H  AI +HG   IHR +F
Sbjct:   38 RTFETRYQAKGYTTVIGVDEAGRGPLAGPVVAAACHVPLDVTIEGVDDSKKISE-PQREALFELLTNHPSITYAVHVNSAQRIDEINILQASLESMTKSANEVAERLQQTDKTFVLVDGNKLPPTLE-LPAEAVVKGDSKVYSIAAASIIAKVTRDRLMREYDEQYPQYGLAKHKGYPTRDHVAAIAKHGPCAIHRMTF 234          
BLAST of mRNA_D-dichotoma_M_contig925.19983.1 vs. uniprot
Match: W2QYI7_PHYPN (Ribonuclease n=12 Tax=Phytophthora TaxID=4783 RepID=W2QYI7_PHYPN)

HSP 1 Score: 194 bits (493), Expect = 6.940e-57
Identity = 107/213 (50.23%), Postives = 140/213 (65.73%), Query Frame = 0
Query:   83 ARNKKTTKPADCVERTREKRKREEGYGMVIGIDEAGRGPFAGPVVAAACCIPPDVNIPGIKDSKKVTELTDREALYTELTQAPGVRWATAVVDNQRIDEVNILEATKEAMTTCALKLCADAPEGTKPFVFVDGNLIPPGLSSVDGECVIGGDGLEYCIAAASIIAKVTRDRMMIEFGKRWPVFGFEKHKGYGTQGHRDAIIQHGVVDIHRRSF 295
            A++K+   P+  + R  E R   +GY  VIG+DEAGRGP  GPVVAAAC +P DV IPG+ DSKK+ E   REAL+  LT  P + +A  V   QRIDE+NIL+A+ E+MT    ++     +  K FV VDGN +PP L  +  E VI GD   Y IAAASIIAKVTRDR+M E+ +++P +G  +HKGY T+GH  AI +HG  +IHR +F
Sbjct:   52 AKSKQILSPS-TLSRIFETRYEAKGYTTVIGVDEAGRGPLVGPVVAAACHVPLDVTIPGVDDSKKILE-PQREALFELLTTHPSITYAVHVNSAQRIDEINILQASLESMTKSVNEVAERLQQKDKTFVLVDGNKLPPTLE-LPAEAVIKGDSKVYSIAAASIIAKVTRDRLMREYDEKFPQYGLAQHKGYPTRGHVAAIAKHGPCEIHRMTF 261          
BLAST of mRNA_D-dichotoma_M_contig925.19983.1 vs. uniprot
Match: A0A836CIH6_9STRA (Ribonuclease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIH6_9STRA)

HSP 1 Score: 191 bits (485), Expect = 1.240e-56
Identity = 98/190 (51.58%), Postives = 123/190 (64.74%), Query Frame = 0
Query:  107 GYGMVIGIDEAGRGPFAGPVVAAACCIPPD-VNIPGIKDSKKVTELTDREALYTELTQAPGVRWATAVVDNQRIDEVNILEATKEAMTTCALKLCADAPEGTKPFVFVDGNLIPPGLSSVDGECVIGGDGLEYCIAAASIIAKVTRDRMMIEFGKRWPVFGFEKHKGYGTQGHRDAIIQHGVVDIHRRSF 295
            G   VIG+DEAGRGP AGPV AAA  +P   + I G+ DSK + E  +RE LY ELT   G  W+  V   QRIDE+NIL+AT E+M   A  +    P   K  V +DGN +P  +  +  EC+I GDG EY IAAASIIAKVTRDR+M ++ +++P +GFE+HKGYGT  H  AI QHG   IHR +F
Sbjct:   17 GIDWVIGVDEAGRGPLAGPVCAAAYALPATGLRIAGVVDSKLIAE-PERERLYEELTAVRGALWSATVTSAQRIDEINILQATMESMQISAHDVMRQCPPAAKAAVLIDGNRVPDNME-LPAECIIKGDGKEYSIAAASIIAKVTRDRLMRQYHEQYPAYGFERHKGYGTAAHMAAIAQHGACPIHRMTF 204          
BLAST of mRNA_D-dichotoma_M_contig925.19983.1 vs. uniprot
Match: W4GYY1_9STRA (Ribonuclease (Fragment) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GYY1_9STRA)

HSP 1 Score: 191 bits (484), Expect = 1.500e-55
Identity = 101/201 (50.25%), Postives = 134/201 (66.67%), Query Frame = 0
Query:  100 EKRKREEGYGMVIGIDEAGRGPFAGPVVAAACCIPPDVNIPGIKDSKKVTELTDREALYTELTQAPGVRWATAVVDNQ-----RIDEVNILEATKEAMTTCALKLCADAPEGTKPFVFVDGNLIPPGLSSVDGECVIGGDGLEYCIAAASIIAKVTRDRMMIEFGKRWPVFGFEKHKGYGTQGHRDAIIQHGVVDIHRRSF 295
            E+R  ++G+  V+G+DEAGRGP AGPVVAAAC IP +V I GI DSK++ E   R+ L+ +LT  PG+++A   +  Q     RIDE+N+L+AT E+MT     L   A      +  +DGN +PP   S+ GECVI GD   Y IAAASIIAKVTRDR+M+ + K+WP +GF +HKGYGT+ H  AI +HG   IHR +F
Sbjct:   82 EQRIYKKGFSCVVGVDEAGRGPLAGPVVAAACWIPLEVEIDGIHDSKQLNE-AQRDLLFEKLTTHPGIQYAVHNIPMQVNSHTRIDEINVLQATLESMTKSVEALTVQAD-----YALIDGNKMPP--LSIQGECVIKGDSKVYAIAAASIIAKVTRDRLMVVYDKQWPEYGFAQHKGYGTRMHMAAIHKHGATPIHRMTF 274          
BLAST of mRNA_D-dichotoma_M_contig925.19983.1 vs. uniprot
Match: A0A5D6XRI3_9STRA (Ribonuclease n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRI3_9STRA)

HSP 1 Score: 188 bits (478), Expect = 2.370e-55
Identity = 99/190 (52.11%), Postives = 129/190 (67.89%), Query Frame = 0
Query:  106 EGYGMVIGIDEAGRGPFAGPVVAAACCIPPDVNIPGIKDSKKVTELTDREALYTELTQAPGVRWATAVVDNQRIDEVNILEATKEAMTTCALKLCADAPEGTKPFVFVDGNLIPPGLSSVDGECVIGGDGLEYCIAAASIIAKVTRDRMMIEFGKRWPVFGFEKHKGYGTQGHRDAIIQHGVVDIHRRSF 295
            +G+  V+G+DEAGRGP AGPVVAAAC +P DV + G+ DSKK+ E   REALY +LT  P V+WA  V   QRIDE+NIL+A+ E+M   A     +A      FVFVDGN +PP +   D E V+ GD   + IAAASIIAKVTRDR+M+ +  ++P F F++HKGY T+ H  AI +HG  +IHR +F
Sbjct:   16 KGFKYVVGVDEAGRGPLAGPVVAAACHVPLDVLLEGVHDSKKLNE-AQREALYEQLTTHPRVQWAVHVNSAQRIDEINILQASLESMVKAA-----EALNQMPDFVFVDGNRMPPTIPW-DAETVVKGDSKVFSIAAASIIAKVTRDRLMVAYDAQFPQFNFKQHKGYPTKDHMTAIAKHGPCEIHRMTF 198          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig925.19983.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJW9_9PHAE3.740e-10066.09Ribonuclease n=2 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
D8RCY3_SELML4.340e-6757.84Ribonuclease (Fragment) n=5 Tax=Selaginella moelle... [more]
A0A2K1L292_PHYPA2.250e-6354.97Ribonuclease n=1 Tax=Physcomitrium patens TaxID=32... [more]
A0A2R6XCN5_MARPO3.230e-5954.21Ribonuclease n=2 Tax=Marchantia polymorpha TaxID=3... [more]
A0A1Y1I4C1_KLENI5.360e-5852.91Ribonuclease n=1 Tax=Klebsormidium nitens TaxID=10... [more]
G4Z1P2_PHYSP4.400e-5752.76Ribonuclease n=4 Tax=Phytophthora TaxID=4783 RepID... [more]
W2QYI7_PHYPN6.940e-5750.23Ribonuclease n=12 Tax=Phytophthora TaxID=4783 RepI... [more]
A0A836CIH6_9STRA1.240e-5651.58Ribonuclease n=1 Tax=Tribonema minus TaxID=303371 ... [more]
W4GYY1_9STRA1.500e-5550.25Ribonuclease (Fragment) n=3 Tax=Aphanomyces astaci... [more]
A0A5D6XRI3_9STRA2.370e-5552.11Ribonuclease n=1 Tax=Pythium brassicum TaxID=14850... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 89..308
e-value: 2.5E-65
score: 222.2
IPR024567Ribonuclease HII/HIII domainPFAMPF01351RNase_HIIcoord: 112..296
e-value: 3.2E-30
score: 105.5
IPR001352Ribonuclease HII/HIIIPANTHERPTHR10954RIBONUCLEASE H2 SUBUNIT Acoord: 84..298
IPR022898Ribonuclease HIIPANTHERPTHR10954:SF18RIBONUCLEASE HIIcoord: 84..298
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..314
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.862
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 104..295

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig925contigD-dichotoma_M_contig925:194852..220957 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig925.19983.1mRNA_D-dichotoma_M_contig925.19983.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig925 194441..221008 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig925.19983.1 ID=prot_D-dichotoma_M_contig925.19983.1|Name=mRNA_D-dichotoma_M_contig925.19983.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=315bp
MLRAVSRGYLLVVLLQLFRVTMGLVNTAVRRSARLAGEKASTCTGSRTAR
RSCTTTVLHGNAEGQVASKGKRARIVGNTKSPARNKKTTKPADCVERTRE
KRKREEGYGMVIGIDEAGRGPFAGPVVAAACCIPPDVNIPGIKDSKKVTE
LTDREALYTELTQAPGVRWATAVVDNQRIDEVNILEATKEAMTTCALKLC
ADAPEGTKPFVFVDGNLIPPGLSSVDGECVIGGDGLEYCIAAASIIAKVT
RDRMMIEFGKRWPVFGFEKHKGYGTQGHRDAIIQHGVVDIHRRSFLRKME
QQLGGKLPLYESES*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR024567RNase_HII/HIII_dom
IPR001352RNase_HII/HIII
IPR022898RNase_HII
IPR012337RNaseH-like_sf