prot_D-dichotoma_M_contig924.19976.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig924.19976.1
Unique Nameprot_D-dichotoma_M_contig924.19976.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length354
Homology
BLAST of mRNA_D-dichotoma_M_contig924.19976.1 vs. uniprot
Match: A0A6H5KKY0_9PHAE (Anaphase-promoting complex subunit 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKY0_9PHAE)

HSP 1 Score: 410 bits (1055), Expect = 1.680e-132
Identity = 232/351 (66.10%), Postives = 263/351 (74.93%), Query Frame = 0
Query:    3 GGTGGEGAGALACQRLLVEAAAFERFGYSEMAVACSRTVLQVFAK----FASASDVEVATACVINAILRGKCLTGAGFVKTPEDIPPSAGTRQRHVGNSRYGERSRASSQPQQVSGAMDARSGADLGSSEGKEACVYEVALALALRQHEAFPHPVSNLWAGGVMVLLHEWMVNRGELTAAEGLGMSLRGCCPLSRGAEAFVEAHLQRVRLLRAQGR---------WQEAVRAASALAKLCDTRGLAPQYARLLLELSRVRLGAEPSSPVGALPHALRCLAVCESYSLDAIHASAMIHLAEVHLRLGSTRRARILLRACLGHLLVNASVQTQGEAWLAMAKCEVAELSLAAG 340
            GGTGGE A  L+CQRLLVEA AFERFGYS+MA AC+R+VLQV A      A+AS VE+A+AC+INA LRGK L G   +  P     SAGT     G  R G+                          E ++ CVY VAL++ALRQH+ FPHPVSN+WA GVMVLLHEWMVNRGE  AAEGLGMSLR CCPLS+GAE+F+EAHLQ+VRLLRAQGR         W EAV+AAS LAKL DTRGLAPQYARLLLELSR  LGAEP+SPVGALPHALRCLAVCESY+LDAIHASAM HLAEVHLR+GSTRRARILL+ACLG LL +A VQ+QGEAWLAMA+C++AE+SL  G
Sbjct:  500 GGTGGEVAAWLSCQRLLVEAGAFERFGYSDMAAACARSVLQVGAADVVVAATASSVELASACMINATLRGKRLPG---LPPPSVFCGSAGT----PGEERRGD------------------------GEEDEQGCVYAVALSIALRQHKEFPHPVSNVWAAGVMVLLHEWMVNRGEFRAAEGLGMSLRACCPLSQGAESFIEAHLQKVRLLRAQGRQVIPQPPVRWAEAVKAASDLAKLSDTRGLAPQYARLLLELSRAWLGAEPASPVGALPHALRCLAVCESYTLDAIHASAMTHLAEVHLRMGSTRRARILLQACLGQLLASAPVQSQGEAWLAMARCDIAEVSLGGG 819          
BLAST of mRNA_D-dichotoma_M_contig924.19976.1 vs. uniprot
Match: D7FTQ0_ECTSI (Anaphase-promoting complex subunit 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTQ0_ECTSI)

HSP 1 Score: 332 bits (851), Expect = 2.700e-104
Identity = 190/325 (58.46%), Postives = 219/325 (67.38%), Query Frame = 0
Query:   16 QRLLVEAAAFERFGYSEMAVACSRTVLQVFAKFASASDVEVATACVINAILRGKCLTGAGFVKTPEDIPPSAGTRQRHVGNSRYGERSRASSQPQQVSGAMDARSGADLGSSEGKEACVYEVALALALRQHEAFPHPVSNLWAGGVMVLLHEWMVNRGELTAAEGLGMSLRGCCPLSRGAEAFVEAHLQRVRLLRAQGRWQEAVRAASALAKLCDTRGLAPQYARLLLELSRVRLGAEPSSPVGALPHALRCLAVCESYSLDAIHASAMIHLAEVHLRLGSTRRARILLRACLGHLLVNASVQTQGEAWLAMAKCEVAELSLAAG 340
            QRLLVEA AFERFGYS+MA AC+R+VLQ+    A+AS VE+A+AC+INA LRGK L G   +  P     SAGT     G  R G+                          E ++ CV+ VAL++ALRQH+ FPHPVSN+WA GVMVLLHEWMVNRGE  AAEG                                  W EAV+AAS LAKL DTRGLAPQYARLLLELSR  LGAEP+SPVGALPHALRCLAVCESY+LDAIHASAM HLA+VHLR+GSTRRARILL+ACLG LL +A VQ+QGEAWLAMA+C++AE+SL  G
Sbjct:  344 QRLLVEAGAFERFGYSDMAAACARSVLQIHGDIATASSVELASACIINATLRGKTLPG---LPPPPVFGGSAGT----PGEERKGD------------------------GEEDEQGCVFAVALSIALRQHKEFPHPVSNVWAAGVMVLLHEWMVNRGEFRAAEG----------------------------------WAEAVKAASDLAKLSDTRGLAPQYARLLLELSRAWLGAEPASPVGALPHALRCLAVCESYTLDAIHASAMTHLAQVHLRMGSTRRARILLQACLGQLLASAPVQSQGEAWLAMARCDIAEVSLGGG 603          
BLAST of mRNA_D-dichotoma_M_contig924.19976.1 vs. uniprot
Match: F0Y6Q2_AURAN (Anaphase-promoting complex subunit 5 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6Q2_AURAN)

HSP 1 Score: 128 bits (322), Expect = 6.520e-29
Identity = 84/209 (40.19%), Postives = 117/209 (55.98%), Query Frame = 0
Query:  137 VALALALRQHEAFPHPVSNLWAGGVMV-----LLHEWMVNRGELTAAEGLGMSLRGCCPLSR--GAEAFVEAHLQRVRLLRAQGRWQEAVRAASALAKLCDTRGLAPQYARLLLELSRVRLGAEPSSPVGALPHALRCLAVCESYSLDAIHASAMIHLAEVHLRLGSTRRARILLRACLGHLLVNASVQTQGEAWLAMAKCEVAELSLA 338
            VA A+ALR+ E      SN  +  + +     L  EW ++RG    AE L  +L G  P+    G EA VEA     RLL  + RW+ AV+  + L + C  +GL  Q A  L+  +  RL A P SPV AL  ALRCLA+CE ++LD +HA A   L  V++ LGS  +AR L++  L  LL ++ VQ QG+AW A+A+ E+ E + A
Sbjct:  647 VAYAVALRRLERLGAHASNRVSSNIAIRAEYLLKFEWALHRGANKRAEALASALLGVSPVQADLGPEAHVEAVRASARLLARRERWERAVKTMNELERYCGRKGLWAQQAECLMLGAHWRLDACPQSPVPALSPALRCLALCEKFALDHLHAEAAFALGRVNVYLGSVAKARSLIQGALPKLLGHSHVQLQGDAWYALAETELREKAYA 855          
BLAST of mRNA_D-dichotoma_M_contig924.19976.1 vs. uniprot
Match: A0A7S4E887_9STRA (Anaphase-promoting complex subunit 5 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E887_9STRA)

HSP 1 Score: 107 bits (268), Expect = 6.560e-22
Identity = 76/209 (36.36%), Postives = 114/209 (54.55%), Query Frame = 0
Query:  137 VALALALRQHEAFPHP---VSNLWAGGVMVLLHEWMVNRGELTAAEGLGMSLRGCCPLSRGAEAFVEAHLQRVR----LLRAQGRWQEAVRAASALAKLCDTRGLAPQYARLLLELSRVRLGAEPSSPVGALPHALRCLAVCESYSLDAIHASAMIHLAEVHLRLGSTRRARILLRACLGHLLVNASVQTQGEAWLAMAKCEVAELSLA 338
            VA  +AL++ E    P    SN+      +L  EW V+R  L  A  L  +L G  P  R ++  VE H++ +R    L  A+  ++ AV+ A+ L ++C  RGL    A+LL + S+  L   P  PV A+  ALR LA+CE ++LDA+HA A + LA V L LG+  +AR   + C   +L  + V  QG+ W A+A+CE+ E + A
Sbjct:  644 VAYDIALKKLEENRCPNKGASNIVERAQYLLRFEWAVHRHALRRAAALHEALLGVSP--RQSDYDVECHVEALRCDLRLSVARDDYERAVKGAAKLERICGNRGLWALQAKLLCDRSKWLLDGCPQEPVPAMNPALRALALCEQWALDALHAEATLRLALVQLGLGNIPKARDAFQQCQLKILEQSHVDVQGDLWYALAQCELEEKAYA 850          
BLAST of mRNA_D-dichotoma_M_contig924.19976.1 vs. uniprot
Match: A0A7S4QWD6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QWD6_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.650e-10
Identity = 62/218 (28.44%), Postives = 97/218 (44.50%), Query Frame = 0
Query:  157 WAGGVMVLLHEWMVNRGELTAAEGLGMSL-----------RGCCPLSR---GAEAFVEAH------------LQRVRLLRAQGR-WQEAVRAASALAKLCDTRGLAPQYARLLLELSRV-----------RLGAEPSSPVGALPHALRCLAVCESYSLDAIHASAMIHLAEVHLRLGSTRRARILLRACLGHLLVNASVQTQGEAWLAMAKCEVAELS 336
            W  G+ + LHEW + R ++  A  L + L           RG   +S     + AF+               ++++ L + Q R W+ A      L  +C    L    A  LL  + +                 S  + ALP  L CL++CES S+D+IHASA+  LA VH RL + ++ R ++ +C+  LL +  V  QGE +  +AKC + E S
Sbjct:  168 WLHGIALFLHEWSIRRCDIQTASSLSLFLFSVPPPPSIILRGSSSISNINGDSHAFMSXXXXXXXLLVSIQSIEQLILQQCQYRNWEHAKYLTKKLCLICFKCKLHYHRASYLLRHALILXXXXXXXXXXXXXXXKSYFLSALPFLLECLSLCESQSIDSIHASALCVLAGVHSRLDNYQKGRAMVLSCMPSLLCHGHVWFQGEGYFIIAKCYLRESS 385          
BLAST of mRNA_D-dichotoma_M_contig924.19976.1 vs. uniprot
Match: A0A834L989_RHOSS (Anaphase-promoting complex subunit 5 n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834L989_RHOSS)

HSP 1 Score: 66.2 bits (160), Expect = 3.730e-8
Identity = 57/178 (32.02%), Postives = 89/178 (50.00%), Query Frame = 0
Query:  164 LLHEWMVNRGELTAAEGLGMSLRGCCPLSRGA--EAFVEAHLQRVRLLRAQGRWQEAVRAASALAKLCDTRGLAPQYARLLLELSRVRLGAEPSSPVGALPHALRCLAVCESYSLDAIHASAMIHLAEVHLRLGST--RRARILLRACLGHLLVNASVQTQGEAWLAMAKCEVAELSL 337
            LLHE  ++ G L  A  L   L        G   E   EA L+R R L A  ++ +A   A +L  +C       + A +LL L+ +       + V  +P AL  L+ C+S++LD + ASA + LAE+ L LGS   +RA  L+   L  +L +  ++ +  A++A AKC +A+ S 
Sbjct:  660 LLHERALHWGHLKLAHQLCDELGVLASSVTGVDVELKTEASLRRARTLLAAKQFSQAAAVAHSLFCMCHKLNKQVENAMILLLLAEIH--KRSGNAVLGIPCALASLSFCQSFNLDLLKASATLTLAELWLSLGSNHAKRASTLVHRSLPMILGHGGLELRARAFIAEAKCYLADPSF 835          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig924.19976.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KKY0_9PHAE1.680e-13266.10Anaphase-promoting complex subunit 5 n=1 Tax=Ectoc... [more]
D7FTQ0_ECTSI2.700e-10458.46Anaphase-promoting complex subunit 5 n=1 Tax=Ectoc... [more]
F0Y6Q2_AURAN6.520e-2940.19Anaphase-promoting complex subunit 5 n=1 Tax=Aureo... [more]
A0A7S4E887_9STRA6.560e-2236.36Anaphase-promoting complex subunit 5 n=1 Tax=Pelag... [more]
A0A7S4QWD6_9STRA1.650e-1028.44Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A834L989_RHOSS3.730e-832.02Anaphase-promoting complex subunit 5 n=1 Tax=Rhodo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 171..347
e-value: 1.7E-6
score: 29.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 198..330
NoneNo IPR availablePANTHERPTHR12830:SF9ANAPHASE-PROMOTING COMPLEX SUBUNIT 5coord: 13..332
IPR037679Anaphase-promoting complex subunit 5PANTHERPTHR12830FAMILY NOT NAMEDcoord: 13..332

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig924contigD-dichotoma_M_contig924:129250..134080 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig924.19976.1mRNA_D-dichotoma_M_contig924.19976.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig924 129250..134080 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig924.19976.1 ID=prot_D-dichotoma_M_contig924.19976.1|Name=mRNA_D-dichotoma_M_contig924.19976.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=354bp
VAGGTGGEGAGALACQRLLVEAAAFERFGYSEMAVACSRTVLQVFAKFAS
ASDVEVATACVINAILRGKCLTGAGFVKTPEDIPPSAGTRQRHVGNSRYG
ERSRASSQPQQVSGAMDARSGADLGSSEGKEACVYEVALALALRQHEAFP
HPVSNLWAGGVMVLLHEWMVNRGELTAAEGLGMSLRGCCPLSRGAEAFVE
AHLQRVRLLRAQGRWQEAVRAASALAKLCDTRGLAPQYARLLLELSRVRL
GAEPSSPVGALPHALRCLAVCESYSLDAIHASAMIHLAEVHLRLGSTRRA
RILLRACLGHLLVNASVQTQGEAWLAMAKCEVAELSLAAGNGDPDRERSE
RQAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR037679Apc5