prot_D-dichotoma_M_contig92.19928.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_D-dichotoma_M_contig92.19928.1
Unique Name	prot_D-dichotoma_M_contig92.19928.1
Type	polypeptide
Organism	Dictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length	172

Homology

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BLAST of mRNA_D-dichotoma_M_contig92.19928.1 vs. uniprot
Match: A0A6H5KXY4_9PHAE (YjgF_endoribonc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXY4_9PHAE)

HSP 1 Score: 213 bits (542), Expect = 9.240e-68
Identity = 104/131 (79.39%), Postives = 118/131 (90.08%), Query Frame = 0

Query:   38 GNFVMSVRTGNLLYTAGHLPISSDGHLATGKVGRDVSEGEAIEAARKVAIQLIGTLKHDLGDLDRIKRVVKLVGFVNCVDGFTGQPKVVNGASDFFAEVFGERGVHARSAVGTNALPLNVPVEIEAIVEFE 168
            GNFVM+VRTGNLLYT+GHLP S +G   TGKVG++++E EA EAARKVAIQLI ++K DLGDLDR+ R+VKLVGFVNC DGF GQPKVVNGASD FAEVFGERGVH+RSAVGTNALP+NVPVEIEAIVEF+
Sbjct:   40 GNFVMTVRTGNLLYTSGHLPTSLEGETTTGKVGQELNEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCTDGFAGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFD 170

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BLAST of mRNA_D-dichotoma_M_contig92.19928.1 vs. uniprot
Match: A0A4D9CNR0_9STRA (YjgF_endoribonc domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CNR0_9STRA)

HSP 1 Score: 189 bits (481), Expect = 6.140e-59
Identity = 92/131 (70.23%), Postives = 110/131 (83.97%), Query Frame = 0

Query:   38 GNFVMSVRTGNLLYTAGHLPISSDGHLATGKVGRDVSEGEAIEAARKVAIQLIGTLKHDLGDLDRIKRVVKLVGFVNCVDGFTGQPKVVNGASDFFAEVFGERGVHARSAVGTNALPLNVPVEIEAIVEFE 168
            GN+ ++VRTGNLL+ AGH+P+   G L TGKVG D S  E  EAA+ +AI L+ TLK +LGDLD++KR+VKLVGFVNCVDGF+ QP VVNGASDFF +VFG++GVHARSAVGTNALPLN+PVEIEAIVE E
Sbjct:   23 GNYALAVRTGNLLFLAGHIPLLKSGVLMTGKVGADKSLEEGQEAAQVIAINLLATLKSELGDLDKVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVEVE 153

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BLAST of mRNA_D-dichotoma_M_contig92.19928.1 vs. uniprot
Match: A0A4D9CNR9_9STRA (YjgF_endoribonc domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CNR9_9STRA)

HSP 1 Score: 186 bits (473), Expect = 2.630e-57
Identity = 88/131 (67.18%), Postives = 111/131 (84.73%), Query Frame = 0

Query:   38 GNFVMSVRTGNLLYTAGHLPISSDGHLATGKVGRDVSEGEAIEAARKVAIQLIGTLKHDLGDLDRIKRVVKLVGFVNCVDGFTGQPKVVNGASDFFAEVFGERGVHARSAVGTNALPLNVPVEIEAIVEFE 168
            GNF M+V++G ++Y +GHLP  ++G L TGKVG +VS  EA  AA+ +A+ L+ +LK ++GDLDR+KR+VKLVGFVNCVDGF+ QP VVNGASDFF +VFG++GVHARSAVGTNALPLN+PVEIEAIVE E
Sbjct:   53 GNFAMAVKSGKMIYLSGHLPTDANGQLLTGKVGAEVSPEEAQGAAKLIALNLLSSLKKEVGDLDRVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVEVE 183

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BLAST of mRNA_D-dichotoma_M_contig92.19928.1 vs. uniprot
Match: W7TB75_9STRA (Endoribonuclease l-psp n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TB75_9STRA)

HSP 1 Score: 186 bits (473), Expect = 1.280e-56
Identity = 88/131 (67.18%), Postives = 111/131 (84.73%), Query Frame = 0

Query:   38 GNFVMSVRTGNLLYTAGHLPISSDGHLATGKVGRDVSEGEAIEAARKVAIQLIGTLKHDLGDLDRIKRVVKLVGFVNCVDGFTGQPKVVNGASDFFAEVFGERGVHARSAVGTNALPLNVPVEIEAIVEFE 168
            GNF M+V++G ++Y +GHLP  ++G L TGKVG +VS  EA  AA+ +A+ L+ +LK ++GDLDR+KR+VKLVGFVNCVDGF+ QP VVNGASDFF +VFG++GVHARSAVGTNALPLN+PVEIEAIVE E
Sbjct:  104 GNFAMAVKSGKMIYLSGHLPTDANGQLLTGKVGAEVSPEEAQGAAKLIALNLLSSLKKEVGDLDRVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVEVE 234

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BLAST of mRNA_D-dichotoma_M_contig92.19928.1 vs. uniprot
Match: A0A8K1FK53_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FK53_PYTOL)

HSP 1 Score: 184 bits (467), Expect = 1.330e-56
Identity = 88/131 (67.18%), Postives = 107/131 (81.68%), Query Frame = 0

Query:   38 GNFVMSVRTGNLLYTAGHLPISSDGHLATGKVGRDVSEGEAIEAARKVAIQLIGTLKHDLGDLDRIKRVVKLVGFVNCVDGFTGQPKVVNGASDFFAEVFGERGVHARSAVGTNALPLNVPVEIEAIVEFE 168
            GN+   VRTGN ++TAGHLP  + G L  GK+G+D++  +  +AA  VA+ LI TLKH+LGDLD++KR+VKLVGFVNCVDGFTGQP V+NGASD   +VFGE+GVHARSAVGTNALPLNV VE+EAIVE E
Sbjct:   38 GNYRTCVRTGNYVFTAGHLPQPTGGDLIVGKIGKDLTPEQGYDAAHHVALSLIATLKHELGDLDKVKRIVKLVGFVNCVDGFTGQPGVINGASDTIGKVFGEKGVHARSAVGTNALPLNVAVEVEAIVEIE 168

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BLAST of mRNA_D-dichotoma_M_contig92.19928.1 vs. uniprot
Match: A0A835Z1E3_9STRA (Putative translation initiation inhibitor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1E3_9STRA)

HSP 1 Score: 184 bits (467), Expect = 1.610e-56
Identity = 87/134 (64.93%), Postives = 109/134 (81.34%), Query Frame = 0

Query:   38 GNFVMSVRTGNLLYTAGHLPISSDGHLATGKVGRDVSEGEAIEAARKVAIQLIGTLKHDLGDLDRIKRVVKLVGFVNCVDGFTGQPKVVNGASDFFAEVFGERGVHARSAVGTNALPLNVPVEIEAIVEFETQE 171
            GN+V +VR+GN L+ AGH+P+  D +LA GKVG+DV+  +A   AR+VAI ++ TLK +LGDLDR+ R+VKLVGFVNC D FTGQP V+NGASD F EVFG++GVHARSAVGTNALPL +PVEIEA++EF   E
Sbjct:   42 GNYVPAVRSGNTLFLAGHIPLMPDNNLAKGKVGKDVTPEQANAIARQVAINILSTLKVELGDLDRVTRIVKLVGFVNCTDDFTGQPGVINGASDLFVEVFGKKGVHARSAVGTNALPLGIPVEIEAVIEFSEDE 175

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BLAST of mRNA_D-dichotoma_M_contig92.19928.1 vs. uniprot
Match: A0A5A8CF06_CAFRO (YjgF_endoribonc domain-containing protein n=2 Tax=Sar TaxID=2698737 RepID=A0A5A8CF06_CAFRO)

HSP 1 Score: 183 bits (465), Expect = 3.680e-56
Identity = 85/132 (64.39%), Postives = 107/132 (81.06%), Query Frame = 0

Query:   37 SGNFVMSVRTGNLLYTAGHLPISSDGHLATGKVGRDVSEGEAIEAARKVAIQLIGTLKHDLGDLDRIKRVVKLVGFVNCVDGFTGQPKVVNGASDFFAEVFGERGVHARSAVGTNALPLNVPVEIEAIVEFE 168
            + N++M  R GNLL+TAGHLP+  DG L  GKVG+D +  EA  AAR+ A+ ++GT+K ++GDLD++KRVVKL GFVNCVD F+ QPKV+NGASDF  EV GERGVH RSAVGTNALP+NVPVE+EAI+E +
Sbjct:   47 AANYIMCHRVGNLLFTAGHLPMQEDGQLFNGKVGKDFTTEEAYTAARQCALAILGTVKAEIGDLDKVKRVVKLTGFVNCVDAFSAQPKVLNGASDFMGEVLGERGVHVRSAVGTNALPMNVPVEVEAIIEID 178

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BLAST of mRNA_D-dichotoma_M_contig92.19928.1 vs. uniprot
Match: K3WLZ8_GLOUD (YjgF_endoribonc domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WLZ8_GLOUD)

HSP 1 Score: 183 bits (464), Expect = 4.050e-56
Identity = 86/131 (65.65%), Postives = 108/131 (82.44%), Query Frame = 0

Query:   38 GNFVMSVRTGNLLYTAGHLPISSDGHLATGKVGRDVSEGEAIEAARKVAIQLIGTLKHDLGDLDRIKRVVKLVGFVNCVDGFTGQPKVVNGASDFFAEVFGERGVHARSAVGTNALPLNVPVEIEAIVEFE 168
            GN+  +VRTGN ++TAGHLP  + G L  GK+G+D++  +  +AA  VA+ L+ TLKH+LGDLD++KR+VKLVGFVNCVDGFTGQP V+NGASD   +VFG++G+HARSAVGTNALPLNV VEIEAIVE E
Sbjct:   40 GNYRTAVRTGNYIFTAGHLPQPTGGDLIVGKIGKDLTPEDGYDAAHHVALSLMATLKHELGDLDKVKRIVKLVGFVNCVDGFTGQPGVINGASDTIGKVFGDKGIHARSAVGTNALPLNVAVEIEAIVEIE 170

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BLAST of mRNA_D-dichotoma_M_contig92.19928.1 vs. uniprot
Match: A0A3R7HFK6_9STRA (YjgF_endoribonc domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HFK6_9STRA)

HSP 1 Score: 181 bits (460), Expect = 1.690e-55
Identity = 88/131 (67.18%), Postives = 107/131 (81.68%), Query Frame = 0

Query:   38 GNFVMSVRTGNLLYTAGHLPISSDGHLATGKVGRDVSEGEAIEAARKVAIQLIGTLKHDLGDLDRIKRVVKLVGFVNCVDGFTGQPKVVNGASDFFAEVFGERGVHARSAVGTNALPLNVPVEIEAIVEFE 168
            GN+  SVR+GN +Y AGHLP  + G L TGKVG+D++  EA +AA  V++ ++ TLK ++GDLD+IKRVVKLVGFVNCVDGF GQP V+NGASD F +VFG +GVHARSAVGTNALPLNV VEIEA+VE E
Sbjct:   41 GNYRTSVRSGNTIYMAGHLPQPAGGELITGKVGKDLTPEEAYDAAHYVSLSIMATLKQEVGDLDKIKRVVKLVGFVNCVDGFAGQPAVINGASDTFGKVFGNKGVHARSAVGTNALPLNVAVEIEAVVEIE 171

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BLAST of mRNA_D-dichotoma_M_contig92.19928.1 vs. uniprot
Match: A0A485LQZ5_9STRA (Aste57867_24668 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LQZ5_9STRA)

HSP 1 Score: 181 bits (458), Expect = 2.110e-55
Identity = 87/129 (67.44%), Postives = 110/129 (85.27%), Query Frame = 0

Query:   38 GNFVMSVRTGNLLYTAGHLPISSDGHLATGKVGRDVSEGEAIEAARKVAIQLIGTLKHDLGDLDRIKRVVKLVGFVNCVDGFTGQPKVVNGASDFFAEVFGERGVHARSAVGTNALPLNVPVEIEAIVE 166
            GN+ + VR+GNLL+TAGH+P ++DG L TGKVG++V+  +A +AA  VA+ L+ TLKH+LGDL++IK++VKL GFVNCVDGF  QP V+NGASD FA+VFG+ GV +RSAVGTNALPLNVPVEIEAIVE
Sbjct:   23 GNYKLIVRSGNLLFTAGHIPTTADGTLITGKVGKEVTTEQAYDAAHVVALSLLATLKHELGDLNKIKQIVKLTGFVNCVDGFAAQPTVINGASDTFAKVFGDIGVGSRSAVGTNALPLNVPVEIEAIVE 151

The following BLAST results are available for this feature:

BLAST of mRNA_D-dichotoma_M_contig92.19928.1 vs. uniprot

BLAST of mRNA_D-dichotoma_M_contig92.19928.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KXY4_9PHAE	9.240e-68	79.39	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
A0A4D9CNR0_9STRA	6.140e-59	70.23	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
A0A4D9CNR9_9STRA	2.630e-57	67.18	YjgF_endoribonc domain-containing protein n=1 Tax=...	[more]
W7TB75_9STRA	1.280e-56	67.18	Endoribonuclease l-psp n=2 Tax=Nannochloropsis gad...	[more]
A0A8K1FK53_PYTOL	1.330e-56	67.18	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A835Z1E3_9STRA	1.610e-56	64.93	Putative translation initiation inhibitor n=1 Tax=...	[more]
A0A5A8CF06_CAFRO	3.680e-56	64.39	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
K3WLZ8_GLOUD	4.050e-56	65.65	YjgF_endoribonc domain-containing protein n=1 Tax=...	[more]
A0A3R7HFK6_9STRA	1.690e-55	67.18	YjgF_endoribonc domain-containing protein n=3 Tax=...	[more]
A0A485LQZ5_9STRA	2.110e-55	67.44	Aste57867_24668 protein n=1 Tax=Aphanomyces stella...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013813	Endoribonuclease L-PSP/chorismate mutase-like	PFAM	PF14588	YjgF_endoribonc	coord: 38..162 e-value: 4.0E-25 score: 88.7
IPR035959	RutC-like superfamily	GENE3D	3.30.1330.40		coord: 28..167 e-value: 3.3E-53 score: 181.2
IPR035959	RutC-like superfamily	SUPERFAMILY	55298	YjgF-like	coord: 37..166
None	No IPR available	PANTHER	PTHR43760	FAMILY NOT NAMED	coord: 37..168

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
D-dichotoma_M_contig92	contig	D-dichotoma_M_contig92:132714..148403 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_D-dichotoma_M_contig92.19928.1	mRNA_D-dichotoma_M_contig92.19928.1	Dictyota dichotoma ODC1387m male	mRNA	D-dichotoma_M_contig92 132584..149341 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_D-dichotoma_M_contig92.19928.1 ID=prot_D-dichotoma_M_contig92.19928.1|Name=mRNA_D-dichotoma_M_contig92.19928.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=172bp
MLRRLRRAYMPEGLWDESCAVSGIEWVCSPSRDHYISGNFVMSVRTGNLL
YTAGHLPISSDGHLATGKVGRDVSEGEAIEAARKVAIQLIGTLKHDLGDL
DRIKRVVKLVGFVNCVDGFTGQPKVVNGASDFFAEVFGERGVHARSAVGT
NALPLNVPVEIEAIVEFETQE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013813	Endoribo_LPSP/chorism_mut-like
IPR035959	RutC-like_sf