prot_D-dichotoma_M_contig919.19924.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig919.19924.1
Unique Nameprot_D-dichotoma_M_contig919.19924.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length306
Homology
BLAST of mRNA_D-dichotoma_M_contig919.19924.1 vs. uniprot
Match: A0A6H5KN83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN83_9PHAE)

HSP 1 Score: 268 bits (685), Expect = 4.370e-85
Identity = 156/342 (45.61%), Postives = 206/342 (60.23%), Query Frame = 0
Query:    1 MSAVNYSKWDKMLRDMSDSEDEELGTQPKVTTFDEPQSVTFGGKAVPQGESSEDRNSKD---YSKQSKDSKGQLHPAAGEGRSIVAAGI-------VQAHVTDEALVENGAAVFDDNGQ----LRYVWRQNRGEVTAVFPIPSGTRAGDIDISISPKPETLTDGVADLLRLALK-----------------------NELIFV-NGELAHQSKL----EEDIEWELKDFPGTIVAADRSKAVADGKDEPPASSECQGTKNSTTSKNVELGERRGLEVTLRKHCPIPGAAIWWKSFLKGDPEIDVSSLKGRTGVGHQSAWEEAMGMFKANVAERKRAGKITID 300
            MS V+YSKWDKM  +MSDS+D+  G  P+VTTFD+PQSVTFGG +  Q     D  S D   +   +  S G   PA G   ++ AA         V+  ++DE L ENGAAV  D       L+YVWRQ R EV  V P+P+GTRAGD+++S+  KPET+ +GVADL+R+A+K                        +L+ V  GELA Q+KL    E ++EWELKD+PGT VA D   +  D     P  +   G + +++S N   G+RRG+E+ L+KHCP+P AA+WWKS LKG PEIDV+++KGR    HQS WEEA+GMFK  VA RK   KI++D
Sbjct:    1 MSGVDYSKWDKMASEMSDSDDDN-GNNPEVTTFDQPQSVTFGGTSASQAAEGWDGASDDSGAHPDTTPSSSGVAAPADGSTGAVAAAATGTTPTPQVKPLISDERLTENGAAVRGDANAGRQALQYVWRQTRAEVVVVVPVPAGTRAGDVEVSLRAKPETIAEGVADLIRVAVKATRGRDGAASRELGTAATAPGGGTKLVPVLEGELAFQAKLGAEDEGEVEWELKDYPGTAVARDDPDSSGDPVGSAPPPAPAAGAREASSSSN---GDRRGVEIVLKKHCPVPNAAVWWKSLLKGGPEIDVAAIKGRATNNHQSVWEEALGMFKEQVAARKGQPKISVD 338          
BLAST of mRNA_D-dichotoma_M_contig919.19924.1 vs. uniprot
Match: A0A836CJH1_9STRA (CS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJH1_9STRA)

HSP 1 Score: 152 bits (383), Expect = 1.690e-40
Identity = 108/304 (35.53%), Postives = 148/304 (48.68%), Query Frame = 0
Query:    4 VNYSKWDKMLRDMSDSEDEELGTQPKVTTFDEPQSVTFGGKAVPQGESSEDRNSKDYSKQSKDSKGQLHPAAGEGRSIVAAGIVQAHVTDE-----ALVENGAAVFDDNGQLRYVWRQNRGEVTAVFPIPSGTRAGDIDISISPKPETLTDGVADLLRLALK---NELIFVNGELAHQSKLEED----IEWELKDFPGTIVAADRSKAVADGKDEPPASSECQGTKNSTTSKNVELGERRGLEVTLRKHCPIPGAAIWWKSFLKGDPEIDVSSLKGRTGVG---HQSAWEEAMGMFKANVAERK 292
            V+YSKWDKM  DMSDSEDEE G++P VT FD P SVT+GG   P+    E+R                  +AG   +  A    +A +TD+      L  NGAAV DD G   Y W Q+RG+V      P GTRA ++++ ++      T      L   LK      I + G+L +   L+ D    ++W L+D       A  S   +D                ST  ++ E    R + VTLRKH PI GAA+WWK  +KG P ID+++++GR   G    Q  W+EAM  F+A V + K
Sbjct:    2 VDYSKWDKMAADMSDSEDEEGGSKPVVTAFDNPTSVTWGGGDAPE----EERLXXXXXXXXXXXXXXXXSSAG---TPGADDSKRAALTDKPARLLTLTRNGAAVQDDCGAYTYFWSQSRGDVAITVVAPPGTRASEVEVKVTSDASAPTLAAQAPLGHHLKVSAKGAILLEGDLTYPVALDPDDPESVDWVLQDLGLPARPAPESAVESDV---------------STADQSSERSPARAITVTLRKHSPIAGAALWWKGAVKGGPTIDMAAIEGRDAKGASASQKVWDEAMEGFRARVKQLK 283          
BLAST of mRNA_D-dichotoma_M_contig919.19924.1 vs. uniprot
Match: A0A7S2XGF4_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XGF4_9EUKA)

HSP 1 Score: 115 bits (288), Expect = 9.640e-27
Identity = 82/299 (27.42%), Postives = 140/299 (46.82%), Query Frame = 0
Query:    3 AVNYSKWDKMLRDMSDSEDEELG-TQPKVTTFDEPQSVTFG-GKAVPQGESSEDRNSKDYSKQSKDSKGQLHPAAGEGRSIVAAGIVQAHVTDEALVENGAAVFDDNGQL-RYVWRQNRGEVTAVFPIPSGTRAGDIDISISPKPETLTDGVADLLRLALKNELIFVNGELAHQSKLEED----IEWELKDFPGTIVAADRSKAVADGKDEPPASSECQGTKNSTTSKNVELGERRGLEVTLRKHCPIPGAAIWWKSFLKGDPEIDVSSLKGR--TGVGHQSAWEEAMGMFKANVAERK 292
            +++YSKWDK++ D+SD ED E     PKVT F++P SVTFG G+AV   ++                     PA   G+S+       + + +E    N  +   +  +  +Y W Q   EVT    +P GT+A  + ++++ + E      A ++ + +  + + + GELAH+ +L+ED    +EWEL++                                        +G RR +  T++K CPI GAA+WW  FLK + +ID + +  R  +  G++  WE+A  MF   ++++K
Sbjct:   23 SLDYSKWDKIVADLSDEEDNEYKKATPKVTRFEQPTSVTFGKGEAVMHSQA---------------------PARSVGKSVPTMQGKPSPMEEEKPEMNKPSYCRNGAEFEKYCWSQKSDEVTLTAWVPLGTKAKKVGVAVTTRNE------AQVINVKVDGKAV-IEGELAHKVELDEDYDGGVEWELEN----------------------------------------VGHRRRVVATMKKDCPIKGAALWWDRFLKMESKIDTTKIGDRRKSSAGNKKVWEQAHRMFLDKISKQK 253          
BLAST of mRNA_D-dichotoma_M_contig919.19924.1 vs. uniprot
Match: A0A7S3ZA34_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZA34_9EUKA)

HSP 1 Score: 75.1 bits (183), Expect = 5.560e-12
Identity = 57/192 (29.69%), Postives = 96/192 (50.00%), Query Frame = 0
Query:    3 AVNYSKWDKMLRDMSDSEDEELG-TQPKVTTFDEPQSVTFG-GKAVPQGESSEDRNSKDYSKQSKDSKGQLHPAAGEGRSIVAAGIVQ---AHVTDEALVENGAAVFDDNGQL-RYVWRQNRGEVTAVFPIPSGTRAGDIDISISPKPETLTDGVADLLRLALKNELIFVNGELAHQSKLEED----IEWEL 184
            +++YSKWDK++ D+SD E+ E     PKVT FD+P SVTFG G+AV                        +H  A  GR+ + A  +Q   + + +E   + G +   +  +  +Y W Q   EVT    +P GT+A  + +S +   E        ++++ +  + + + GELAH+ +L+ED    +EWE+
Sbjct:   18 SLDYSKWDKVVADLSDDEENEYKKATPKVTRFDQPASVTFGKGEAV------------------------MHAPAPGGRAGIPAPKIQDKPSAMEEEKPDKIGPSYCRNGAEFEKYSWSQTSDEVTLTAWVPQGTKAKKVRVSANSSNEV------QVIKVTVDGKTV-IEGELAHKVELDEDYDGGVEWEM 178          
BLAST of mRNA_D-dichotoma_M_contig919.19924.1 vs. uniprot
Match: A4S3E6_OSTLU (CS domain-containing protein n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A4S3E6_OSTLU)

HSP 1 Score: 64.7 bits (156), Expect = 2.950e-8
Identity = 60/223 (26.91%), Postives = 85/223 (38.12%), Query Frame = 0
Query:   96 LVENGAAVFD-DNGQLRYVWRQNRGEVTAVFPIPSGTRAGDIDISISPKPETLTDGVADLLRLALKNELIFVNGELAHQSKLE---EDIE--------WELKDFPGTIVAADRSKAVADGKDEPPASSECQGTKNSTTSKNVELGERRGLEVTLRKHCPIPGAAIWWKSFLKGDPEIDVSSLKGRTGVGHQS---AWEEAMGMFKANVAERKRAGKITIDSGD 303
            +  NG  V D    + RY WRQ+  E T    +  GT+A D  + +     T T+    +L        + + GE AH+   E   ED E        WE+ DF G                                        RR + VT+RK         WW+S +KG PE D S+ + R     ++   AWEEA  MF+  V  R+   K+ ID+ D
Sbjct:  126 MTRNGGVVLDAGTKEERYYWRQDASEATLSVVVAPGTKAKDARVRV-----TATEVEISVLNRETGASEVVLRGEWAHEIDPEPRDEDDEYAPTTFGDWEITDFEGADA-------------------------------------RRVVRVTVRKKAS-QMLTHWWRSCIKGAPEEDPSTFEDRNSSRAEAGRRAWEEAQEMFRERVKTRE---KVEIDAHD 302          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig919.19924.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KN83_9PHAE4.370e-8545.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CJH1_9STRA1.690e-4035.53CS domain-containing protein n=1 Tax=Tribonema min... [more]
A0A7S2XGF4_9EUKA9.640e-2727.42Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A7S3ZA34_9EUKA5.560e-1229.69Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A4S3E6_OSTLU2.950e-826.91CS domain-containing protein n=2 Tax=Ostreococcus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037898NudC familyPANTHERPTHR12356NUCLEAR MOVEMENT PROTEIN NUDCcoord: 66..186
NoneNo IPR availablePANTHERPTHR12356:SF3NUCLEAR MIGRATION PROTEIN NUDCcoord: 66..186
IPR007052CS domainPROSITEPS51203CScoord: 107..254
score: 9.565
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 109..264

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig919contigD-dichotoma_M_contig919:242672..243589 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig919.19924.1mRNA_D-dichotoma_M_contig919.19924.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig919 242557..243876 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig919.19924.1 ID=prot_D-dichotoma_M_contig919.19924.1|Name=mRNA_D-dichotoma_M_contig919.19924.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=306bp
MSAVNYSKWDKMLRDMSDSEDEELGTQPKVTTFDEPQSVTFGGKAVPQGE
SSEDRNSKDYSKQSKDSKGQLHPAAGEGRSIVAAGIVQAHVTDEALVENG
AAVFDDNGQLRYVWRQNRGEVTAVFPIPSGTRAGDIDISISPKPETLTDG
VADLLRLALKNELIFVNGELAHQSKLEEDIEWELKDFPGTIVAADRSKAV
ADGKDEPPASSECQGTKNSTTSKNVELGERRGLEVTLRKHCPIPGAAIWW
KSFLKGDPEIDVSSLKGRTGVGHQSAWEEAMGMFKANVAERKRAGKITID
SGDTG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037898NudC_fam
IPR007052CS_dom
IPR008978HSP20-like_chaperone