prot_D-dichotoma_M_contig9.19749.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig9.19749.1
Unique Nameprot_D-dichotoma_M_contig9.19749.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length474
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig9.19749.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 224..255
e-value: 2000.0
score: 1.6
coord: 260..291
e-value: 120.0
score: 11.1
coord: 406..437
e-value: 0.46
score: 19.6
coord: 296..328
e-value: 130.0
score: 10.8
coord: 370..401
e-value: 860.0
score: 4.4
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 203..316
e-value: 9.3E-7
score: 28.1
coord: 290..437
e-value: 4.2E-11
score: 42.3
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10coord: 273..457
e-value: 1.8E-18
score: 68.7
NoneNo IPR availablePANTHERPTHR13068:SF78MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEINcoord: 223..457
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 223..457

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig9contigD-dichotoma_M_contig9:943727..945148 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig9.19749.1mRNA_D-dichotoma_M_contig9.19749.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig9 935467..946364 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig9.19749.1 ID=prot_D-dichotoma_M_contig9.19749.1|Name=mRNA_D-dichotoma_M_contig9.19749.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=474bp
MSSAAVGIRLTLLRGVGSRATSRSLLSNAARKHAGKGNRELMRGRGTDMS
CFARGISAEVSRGISAEVSRGVPKAIPVRALCAQAGVPREQEAEGVSADV
RDEHEATNGSEDTTGDVTGGLAGDAVVDVAGGGAGDVVGDAPTEAAEMTD
EEEQARILERTRVETAIELKRRWLQEKLGMPGERALTVARNSKWMWDRDV
ETDFEPKMRWLGERIGIANEQQIARLVANNVFLLRISAEDLSSSMENLRD
FLRVSEVTMNKMVADCPRILVVPVEEAARRIKWLEERLLLSGANAMRVVV
SQPMLLASSIESRLEPAVLWAERRLRLDPQQVGFLTLKYPKWMFAVAKDG
LEMRLRWLQAALGCSHEQAARMMSRDGRLWFLGRKNLWPKILFFREDLGV
PSESFREAVVKCPMILASNLNTRIVPRVARIREAGIPFDFEKHQRIISVA
SDESFKKWLDEALAPTPAAETDP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
IPR038538MTERF_sf