prot_D-dichotoma_M_contig1100.888.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig1100.888.1
Unique Nameprot_D-dichotoma_M_contig1100.888.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length153
Homology
[Close]
BLAST of mRNA_D-dichotoma_M_contig1100.888.1 vs. uniprot
Match: A0A6H5KG72_9PHAE (S1-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG72_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 1.810e-50
Identity = 103/174 (59.20%), Postives = 119/174 (68.39%), Query Frame = 0 
Query:    1 MRVILWILGIAFSLNVCNAFMGVTSRAAAVGAGHFRWDMGSAIT------------------QTSR----VGRGSTTASLLAKKRGKTSGNNDSSQPRERKEKDDVIEVEGVVTEGLPSAMFRVEVGATGKTVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITYRYKK 152
            MR ILW+LG+A   ++  AF+GV  RA A+ A        S  T                  +T+R    +GR + T++LLAK        N+ ++PRERKEKDDVIEVEGVV EGLPSAMFRVEVGATGK VLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRIT+RYKK
Sbjct:    1 MRNILWLLGVAALSSMGEAFVGVPVRATALVARGRASQQESCCTSLVTHSIHRTFAVDHDGQETARRPANMGRAAATSALLAKXXXXXXXXNEGAKPRERKEKDDVIEVEGVVKEGLPSAMFRVEVGATGKVVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITFRYKK 174
[Close]
BLAST of mRNA_D-dichotoma_M_contig1100.888.1 vs. uniprot
Match: D7G916_ECTSI (S1-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G916_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 1.980e-45
Identity = 86/131 (65.65%), Postives = 96/131 (73.28%), Query Frame = 0 
Query:   49 VGRGSTTASLLAKKRGKTSGNNDSSQPRERKEKDDVIE---------------------------VEGVVTEGLPSAMFRVEVGATGKTVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITYRYKK 152
            + R + T++LLAKK+G+  GNN+ ++PRERKEKDDVIE                           VEGVV EGLPSAMFRVEVGATGK VLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRIT+RYKK
Sbjct:    1 MARVAATSALLAKKKGRGGGNNEGAKPRERKEKDDVIEPDSIFTSHAEKDCSAKACRMLVLLSQKVEGVVKEGLPSAMFRVEVGATGKVVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITFRYKK 131
[Close]
BLAST of mRNA_D-dichotoma_M_contig1100.888.1 vs. uniprot
Match: A0A835YXL6_9STRA (S1-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXL6_9STRA)

HSP 1 Score: 137 bits (346), Expect = 7.210e-39
Identity = 70/110 (63.64%), Postives = 85/110 (77.27%), Query Frame = 0 
Query:   43 ITQTSRVGRGSTTASLLAKKRGKTSGNNDSSQPRERKEKDDVIEVEGVVTEGLPSAMFRVEVGATGKTVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITYRYKK 152
            +++     R   T  +  KK+G+   N + + PRE+K KDDVIEVEGVV E LPSAMFRVE+  T + +LCTISG+IRKNFVRILVGDPV+VELSPYDLTRGRIT+RYKK
Sbjct:   36 VSEAPMESRRQCTTIMHQKKKGRGGQNTEGATPREKKVKDDVIEVEGVVKESLPSAMFRVEISPTNQIILCTISGKIRKNFVRILVGDPVKVELSPYDLTRGRITFRYKK 145
[Close]
BLAST of mRNA_D-dichotoma_M_contig1100.888.1 vs. uniprot
Match: A0A7S4EBF0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EBF0_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.740e-31
Identity = 59/74 (79.73%), Postives = 67/74 (90.54%), Query Frame = 0 
Query:   76 RERKEKDDVIEVEGVVTEGLPSAMFRVEVGATGKTVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITYR 149
            RERK KDD IEV+GVVTE LPSA FRVE+GAT + +LCTISG+IRKNFV+ILVGD V+VELSPYDLTRGRIT+R
Sbjct:   54 RERKVKDDKIEVDGVVTEALPSANFRVEIGATKQVLLCTISGKIRKNFVKILVGDSVKVELSPYDLTRGRITFR 127
[Close]
BLAST of mRNA_D-dichotoma_M_contig1100.888.1 vs. uniprot
Match: A0A6U1NIU1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NIU1_9STRA)

HSP 1 Score: 114 bits (286), Expect = 1.370e-29
Identity = 55/72 (76.39%), Postives = 64/72 (88.89%), Query Frame = 0 
Query:   81 KDDVIEVEGVVTEGLPSAMFRVEVGATGKTVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITYRYKK 152
            K+DVIEVEGVV E LP+AMFRVE+ A    +LCTISG+IRKNFV++LVGD VRVELSPYDLTRGRIT+RY+K
Sbjct:   90 KEDVIEVEGVVKESLPNAMFRVELEANQNVILCTISGKIRKNFVKVLVGDSVRVELSPYDLTRGRITFRYRK 161
[Close]
BLAST of mRNA_D-dichotoma_M_contig1100.888.1 vs. uniprot
Match: A0A7S4K9U1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K9U1_9STRA)

HSP 1 Score: 105 bits (263), Expect = 3.400e-26
Identity = 59/96 (61.46%), Postives = 70/96 (72.92%), Query Frame = 0 
Query:   58 LLAKKRGKTSGNNDSSQP-RERKEKDDVIEVEGVVTEGLPSAMFRVEVGATGKT---VLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITYR 149
            L  KK  +  GN   ++P RE+K KDDVIEVEG V E LP+AMFR  +    +T   VL TISG+IRKNFV+ILVGD V +ELSPYDLTRGRIT+R
Sbjct:   58 LFGKKAARAQGNERKNRPVREKKVKDDVIEVEGTVLESLPNAMFRCAIDGAPETQEPVLATISGKIRKNFVKILVGDTVTIELSPYDLTRGRITFR 153
[Close]
BLAST of mRNA_D-dichotoma_M_contig1100.888.1 vs. uniprot
Match: A0A1Z5KC21_FISSO (Translation initiation factor IF-1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KC21_FISSO)

HSP 1 Score: 104 bits (259), Expect = 5.910e-26
Identity = 57/100 (57.00%), Postives = 73/100 (73.00%), Query Frame = 0 
Query:   56 ASLLAKKRGKTSGNNDSSQP-RERKEKDDVIEVEGVVTEGLPSAMFRVEVGATGKT---VLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITYRYK 151
            +++  KK  +  GN   ++  R RK KDDVIEVE VV EGLP+AMFR  +    ++   +L TISG+IRKNFV+ILVGD V +ELSPYDLTRGRIT+RY+
Sbjct:   26 SAIYGKKEARAQGNERKNKTERVRKTKDDVIEVEAVVVEGLPNAMFRCAIDGAPESQEPILATISGKIRKNFVKILVGDKVLIELSPYDLTRGRITFRYR 125
[Close]
BLAST of mRNA_D-dichotoma_M_contig1100.888.1 vs. uniprot
Match: A0A7R9YY09_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9YY09_9STRA)

HSP 1 Score: 105 bits (261), Expect = 6.800e-26
Identity = 61/96 (63.54%), Postives = 73/96 (76.04%), Query Frame = 0 
Query:   58 LLAKKRGKTSGNNDSSQP-RERKEKDDVIEVEGVVTEGLPSAMFRVEV-GA--TGKTVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITYR 149
            L  KK  +  GN   ++  RE+K+KDDVIEVEGVV E LP+AMFR  + GA  T + VL TISG+IRKNFV+ILVGD V +ELSPYDLTRGRIT+R
Sbjct:   58 LFGKKAARAQGNERKNKTVREKKKKDDVIEVEGVVLESLPNAMFRCAIDGAPDTQEPVLATISGKIRKNFVKILVGDKVTIELSPYDLTRGRITFR 153
[Close]
BLAST of mRNA_D-dichotoma_M_contig1100.888.1 vs. uniprot
Match: F2N8M5_CORGP (Translation initiation factor IF-1 n=11 Tax=Coriobacteriaceae TaxID=84107 RepID=F2N8M5_CORGP)

HSP 1 Score: 102 bits (255), Expect = 9.030e-26
Identity = 52/71 (73.24%), Postives = 60/71 (84.51%), Query Frame = 0 
Query:   81 KDDVIEVEGVVTEGLPSAMFRVEVGATGKTVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITYRYK 151
            K+D IE+EG VTE LP+AMFRVE+   G TVLC+ISG+IR N++RIL GD V VELSPYDLTRGRITYRYK
Sbjct:   22 KEDAIELEGTVTEPLPNAMFRVEL-ENGHTVLCSISGKIRMNYIRILPGDKVVVELSPYDLTRGRITYRYK 91
[Close]
BLAST of mRNA_D-dichotoma_M_contig1100.888.1 vs. uniprot
Match: A0A7S2A1G4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A1G4_TRICV)

HSP 1 Score: 104 bits (259), Expect = 1.320e-25
Identity = 59/100 (59.00%), Postives = 72/100 (72.00%), Query Frame = 0 
Query:   54 TTASLLAKKRGKTSGNNDSSQP-RERKEKDDVIEVEGVVTEGLPSAMFRVEVGATGKT---VLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITYR 149
            T  +L  KK  +  GN   ++  R +K+KDDVIEVEGVV E LP+AMFR  +    +T   VL TISG+IRKNFV+ILVGD V +ELSPYDLTRGRIT+R
Sbjct:   53 TDTALFGKKAARAQGNERKNRTERVKKQKDDVIEVEGVVLESLPNAMFRCAIDGAPETQEPVLATISGKIRKNFVKILVGDKVTIELSPYDLTRGRITFR 152
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1100.888.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KG72_9PHAE1.810e-5059.20S1-like domain-containing protein n=1 Tax=Ectocarp... [more]
D7G916_ECTSI1.980e-4565.65S1-like domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835YXL6_9STRA7.210e-3963.64S1-like domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S4EBF0_9STRA1.740e-3179.73Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6U1NIU1_9STRA1.370e-2976.39Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4K9U1_9STRA3.400e-2661.46Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A1Z5KC21_FISSO5.910e-2657.00Translation initiation factor IF-1 n=1 Tax=Fistuli... [more]
A0A7R9YY09_9STRA6.800e-2663.54Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
F2N8M5_CORGP9.030e-2673.24Translation initiation factor IF-1 n=11 Tax=Coriob... [more]
A0A7S2A1G4_TRICV1.320e-2559.00Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006196RNA-binding domain, S1, IF1 typePFAMPF01176eIF-1acoord: 85..149
e-value: 6.4E-23
score: 80.3
IPR006196RNA-binding domain, S1, IF1 typePROSITEPS50832S1_IF1_TYPEcoord: 75..151
score: 19.205
NoneNo IPR availableGENE3D2.40.50.140coord: 73..151
e-value: 4.4E-31
score: 108.5
NoneNo IPR availablePANTHERPTHR33370:SF1TRANSLATION INITIATION FACTOR IF-1, CHLOROPLASTICcoord: 61..151
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..152
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.897
NoneNo IPR availableTMHMMTMhelixcoord: 4..23
IPR004368Translation initiation factor IF-1TIGRFAMTIGR00008TIGR00008coord: 81..150
e-value: 9.8E-28
score: 93.9
IPR004368Translation initiation factor IF-1PANTHERPTHR33370FAMILY NOT NAMEDcoord: 61..151
IPR004368Translation initiation factor IF-1HAMAPMF_00075IF_1coord: 79..151
score: 23.541
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 63..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig1100contigD-dichotoma_M_contig1100:76414..87013 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig1100.888.1mRNA_D-dichotoma_M_contig1100.888.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig1100 75600..87474 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig1100.888.1 ID=prot_D-dichotoma_M_contig1100.888.1|Name=mRNA_D-dichotoma_M_contig1100.888.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=153bp
MRVILWILGIAFSLNVCNAFMGVTSRAAAVGAGHFRWDMGSAITQTSRVG
RGSTTASLLAKKRGKTSGNNDSSQPRERKEKDDVIEVEGVVTEGLPSAMF
RVEVGATGKTVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITYRY
KK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006196RNA-binding_domain_S1_IF1
IPR004368TIF_IF1
IPR012340NA-bd_OB-fold