prot_D-dichotoma_M_contig110.871.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig110.871.1
Unique Nameprot_D-dichotoma_M_contig110.871.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length232
Homology
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BLAST of mRNA_D-dichotoma_M_contig110.871.1 vs. uniprot
Match: D8LQ22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ22_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 3.640e-18
Identity = 102/272 (37.50%), Postives = 114/272 (41.91%), Query Frame = 0 
Query:    1 MDPQSRLGRPLDFRDFLPGFAWAGLTMDPVS-FSKSSDDGAFRPRTAPERLE----QNQPNGSSSXXXXXXXXXRPRPSCNRAT-----PQKNARRRDAEEGAG----PSRDADVKL---NK----------------------FSRHGGHSAPGGGKGLLSKSWSVGPRS------GTYGG-RTGSVRPTGTKGPRTHGARTGVADQRGRVTRCKARAAAGGVSALPGSDDYRPRTQILGMNAGRPPREVRQAPLDRPLTAPCGKVGRWRV 226
            +DP+SRLG+PLDFRDFLP  AW GL+ DPV     S  DG  RP TAPERL     Q  P G +          R   S N             RRR    G G    PS D+ V     NK                       SR     AP     LL K  +   RS       TY   R+G+ R  G    RT                    AA        G D++ PRTQILGMN GR P  VRQ P+DRPLTAPCGKVGR RV
Sbjct:  402 IDPRSRLGQPLDFRDFLPQIAWLGLSPDPVRPLPGSPGDGTLRPHTAPERLTDAAGQWSPQGWAGGDANREYDRRASRSRNGGLVGGVWASGGRRRRGPGGGLGVAHPPSLDSGVNTWWKNKTPHQRGGRXXXXXXXXXXXXXXXSRTEAGEAP-----LLPKRHAFLRRSHPTATTATYASSRSGTTRNNGDA--RTXXXXXXXXXXXXXXXXXXXXAA--------GVDEFWPRTQILGMNGGRLPTRVRQVPIDRPLTAPCGKVGRRRV 658
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig110.871.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQ22_ECTSI3.640e-1837.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig110contigD-dichotoma_M_contig110:20869..25991 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig110.871.1mRNA_D-dichotoma_M_contig110.871.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig110 12973..25991 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig110.871.1 ID=prot_D-dichotoma_M_contig110.871.1|Name=mRNA_D-dichotoma_M_contig110.871.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=232bp
MDPQSRLGRPLDFRDFLPGFAWAGLTMDPVSFSKSSDDGAFRPRTAPERL
EQNQPNGSSSRSGGGGGRRRPRPSCNRATPQKNARRRDAEEGAGPSRDAD
VKLNKFSRHGGHSAPGGGKGLLSKSWSVGPRSGTYGGRTGSVRPTGTKGP
RTHGARTGVADQRGRVTRCKARAAAGGVSALPGSDDYRPRTQILGMNAGR
PPREVRQAPLDRPLTAPCGKVGRWRVDHARP*
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