prot_D-dichotoma_M_contig1087.746.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig1087.746.1
Unique Nameprot_D-dichotoma_M_contig1087.746.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length1050
Homology
BLAST of mRNA_D-dichotoma_M_contig1087.746.1 vs. uniprot
Match: D8LLY3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLY3_ECTSI)

HSP 1 Score: 280 bits (717), Expect = 3.100e-75
Identity = 307/695 (44.17%), Postives = 372/695 (53.53%), Query Frame = 0
Query:  127 PLELSLRECSLGDVGVASLAESSWFCGSEGVKVLSLRHNQLTASGSRALFASLRELSE--DVLSCLQLDFNPLGDAGVQPLPAYLKQRATQGCGELEELSLRFCGVGPAGCRYLSSALIKSAASASSAQGP----PMSGCAPTSGSGKDVSSGSAGEEWKSSREQGNN--LRP--SAGIGRLLLTGN-RLGDDGARSLASALKKDRSLKVLDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKLVGDGPGTLEILEXXXXXXXXXXXXXXXKGLEINGARDRSTAQGKGLLRLGLAGNS-------------------IGWAGGCALAKSLSGRRGRAPELRELELAGNKLTLTAAKTSHGSTSSSLYKSAGGAITSLLNQLVDEAYLRGDAPSSSPSPGSISGILSTAPTNSRGSPDKGYASGSGPRCGVLALGAAIRQPG---------------GSPSLRKIGLARTGITKVEASKLARALRQRPAESPLEDVEIGMNGLHAKVMRDVRSAVEDRSALTSGTPTARLGSRSRERNDAPSEETQGSEEGSSQEPCRRRRPRTRSVDGKNSLGKHGERLSGGIGSQDRMVGRSRR-KATGDPHGEQQDFDGEAKRHAVVKKYVPPAEGKVELRVFGRKVASFGEA--SERKDLGIDVEVFGKRARF----GSPSSARSSSS 769
            P  LSLRECSLGD+GVA +A S W  G  GV+ LSLR NQ+TA+G RAL  SLR  ++  D L+CL+LDFNP+GDAG QPLPAYLK+RA +G G LEELSLRFC +GPAG  YLSSAL+KSAA+A  A       P S    T+G                 ++ G    L P  ++GI RLLLTGN RLGD GA++LASALKKD SL+VLDL    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       G   LE LE                GL   G  +R   +  G  + G++                                    G  G    L ELELAGN LTL+A++ +  + SSSLYKSAGGA++SLL   VDE+Y  G+    S + GS+    +  P  S G+P  G A     RC V  LG A+   G               G PSL+ +GLARTG+T+ +A++LA ALR RP +SPLE+VE+G+NGL  K    +R AVE         PTA     S   +D      +G           R  P    VD              G+        RSRR  AT  P  E+      + R A V +YVPP  G VEL +FG+K ASF +A  S R+   +DVEVFGKR RF    GSP S R  SS
Sbjct:   76 PSALSLRECSLGDLGVAEVARSPWVRGKAGVRALSLRQNQVTAAGVRALLDSLRSATDSGDRLACLELDFNPIGDAGAQPLPAYLKERAARGGGGLEELSLRFCDIGPAG--YLSSALLKSAAAAKIAANDDANSPASEAPTTAGXXXXXXXXXXXXXXXXXKKGGAEVVLPPPVASGIRRLLLTGNDRLGDAGAKALASALKKDNSLQVLDLTRCKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAGSSALECLELQGNHVGDAGAVALADGLV--GGNNRGGRRXXGASKQGISSRRGPGLRSXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGGVV--LEELELAGNALTLSASQAAAQAKSSSLYKSAGGALSSLLTTFVDESYYGGN----SNNRGSVQDASALTPP-SLGNPAGGVAERP-LRCAVAELGEALAGQGARGXXXXXXXXXXXXGCPSLKAVGLARTGLTERDAARLAAALRARPVDSPLEEVEVGLNGLSVKAAEAIRLAVES--------PTAPHDRSSSFVDDLEKNGGRGRXXXXXXXXXXRHDPAAPGVD------------EPGL--------RSRRGTATAAPAEER------SARGAEVGEYVPPG-GSVELGLFGKKFASFQQAGGSGRE---LDVEVFGKRVRFERTGGSPPSPRPGSS 720          
BLAST of mRNA_D-dichotoma_M_contig1087.746.1 vs. uniprot
Match: A0A6H5JEB8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEB8_9PHAE)

HSP 1 Score: 190 bits (483), Expect = 1.060e-47
Identity = 125/227 (55.07%), Postives = 148/227 (65.20%), Query Frame = 0
Query:  115 ADVVAEVGHSKLP------LELSLRECSLGDVGVASLAESSWFCGSEGVKVLSLRHNQLTASGSRALFASLRELSE--DVLSCLQLDFNPLGDAGVQPLPAYLKQRATQGCGELEELSLRFCGVGPAGCRYLSSALIKSAASAS-SAQGPPMSGCAPTSGSGKDVSSGSAGEEW---KSSREQGNNLRPSAGIGRLLLTGN-RLGDDGARSLASALKKDRSLKVLDL 328
            A VV E  H + P        LSLRECSLGD+GVA +A S W  G  GV+ LSLR NQ+TA+G RAL  SLR  ++  D L+CL+LDFNP+GDAG QPLPAYLK+RA +G G LEELSLRFC +GPAGCRYLSSAL+KSAA+A  SA   P +                        K   E G     ++GI RLLLTGN R+GD GA++LASALKKD SL+VLDL
Sbjct:  111 AGVVEEGQHHRYPDTNSPPSALSLRECSLGDLGVAEVARSPWVRGKAGVRALSLRQNQVTAAGVRALLDSLRSAADSGDRLACLELDFNPIGDAGAQPLPAYLKERAARGGGGLEELSLRFCDIGPAGCRYLSSALLKSAAAAKISANDDPNNSAXXXXXXXXXXXXXXXXXXXXXXKGGAEFGLPPPAASGIRRLLLTGNDRIGDAGAKALASALKKDSSLQVLDL 337          
BLAST of mRNA_D-dichotoma_M_contig1087.746.1 vs. uniprot
Match: A0A835Z931_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z931_9STRA)

HSP 1 Score: 129 bits (325), Expect = 2.900e-27
Identity = 173/440 (39.32%), Postives = 216/440 (49.09%), Query Frame = 0
Query:   71 IDLSFCHIGIDGIPSLLHFLSQRKSTRCEGLTAKDVAERSPTREADVVAEVGHSKLPLELSLRECSLGDVGVASLAESSWFCGSEGVKVLSLRHNQLTASGSRALFASLRELSEDVLSCLQLDFNPLGDAGVQPLPAYLKQRATQGCGELEELSLRFCGVGPAGCRYLSSALIKSAASASSAQGPPMSGCAPTSGSGKDVSSGSAGEEWKSSREQGNNLRPSAGIGRLLLTGNRLGDDGARSLASALKKDRSLKVLDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKLVGDGPGTLEILEXXXXXXXXXXXXXXXKGLEINGARD---RSTAQGKGL----LRLGLAGNSIGWAGGCALAKSLSGRRGRAPELRELELAGNKLTLTAAKTSHGSTSSS---LYKSAGGAITSL---LNQLVDEAYL 497
            IDLSF H+G  G   +L  LS+                               S  P  L L+ECSLGD G   +  S+     EGV VLSLRHN +   GSR+L   LR  + D L  L LDFN +GDAG+QPLPA LK  +    G LE LSLRFCG+  AGCR ++SAL K+  +AS                                           GI  L L GN LGD GA++LA+ALK++ +L+ LDL   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    + DG  +++ L+               + L     R+   RS  Q +      + LGL  N IG  G  ALA +L+        L  L+L+GN L   A K   G+T ++   L K A   ++SL     Q VDE Y+
Sbjct:   55 IDLSFSHVGPVGASEVLSGLSEA------------------------------SAAPSGLLLQECSLGDRGALDVVSSTLVSSPEGVGVLSLRHNHIGRVGSRSLLQHLRT-APDRLQTLVLDFNLIGDAGLQPLPALLKDSSN---GRLESLSLRFCGISAAGCRSIASALSKAQVNASD-----------------------------------------RGIRHLSLAGNPLGDAGAKALAAALKQNVALEELDLTRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRDGASSIQRLDLDHNHIADGGAFAFARALSAKQGRNPASRSAQQQQQHAPPGVALGLVANGIGCEGCSALATALAYNC----RLESLDLSGNPLFGAAPKAKKGATGTAKALLTKQATSVVSSLGKLYTQFVDETYV 415          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1087.746.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LLY3_ECTSI3.100e-7544.17Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JEB8_9PHAE1.060e-4755.07Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A835Z931_9STRA2.900e-2739.32Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 377..404
e-value: 0.014
score: 24.5
coord: 553..580
e-value: 23.0
score: 7.5
coord: 154..181
e-value: 0.61
score: 18.7
coord: 123..149
e-value: 150.0
score: 1.8
coord: 184..211
e-value: 11.0
score: 9.7
coord: 415..442
e-value: 2.2
score: 14.7
coord: 217..244
e-value: 1.0
score: 17.1
coord: 320..347
e-value: 0.0065
score: 25.7
coord: 348..375
e-value: 2.5E-4
score: 30.4
coord: 292..319
e-value: 1.1
score: 16.8
NoneNo IPR availablePANTHERPTHR24107FAMILY NOT NAMEDcoord: 71..240
coord: 209..669
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..1049
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..23
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 128..603
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 320..342
e-value: 5.6E-4
score: 19.7
coord: 347..370
e-value: 6.0E-4
score: 19.7
coord: 379..399
e-value: 9.1E-4
score: 19.1
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 285..410
e-value: 2.1E-30
score: 107.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig1087contigD-dichotoma_M_contig1087:145255..152992 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig1087.746.1mRNA_D-dichotoma_M_contig1087.746.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig1087 144694..153092 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig1087.746.1 ID=prot_D-dichotoma_M_contig1087.746.1|Name=mRNA_D-dichotoma_M_contig1087.746.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=1050bp
MVWVVKYIRFKSSSFACCITLLGKFAYCIGSTPPVGEQRQITANFNADTN
YPIHLSSPLEDVEIDPTNAAIDLSFCHIGIDGIPSLLHFLSQRKSTRCEG
LTAKDVAERSPTREADVVAEVGHSKLPLELSLRECSLGDVGVASLAESSW
FCGSEGVKVLSLRHNQLTASGSRALFASLRELSEDVLSCLQLDFNPLGDA
GVQPLPAYLKQRATQGCGELEELSLRFCGVGPAGCRYLSSALIKSAASAS
SAQGPPMSGCAPTSGSGKDVSSGSAGEEWKSSREQGNNLRPSAGIGRLLL
TGNRLGDDGARSLASALKKDRSLKVLDLTRCHVGDDGAKFLADALRSNTS
LRELRLAYNNISPDGANALAKLVGDGPGTLEILELGHNRIGDDGAAALAK
GLEINGARDRSTAQGKGLLRLGLAGNSIGWAGGCALAKSLSGRRGRAPEL
RELELAGNKLTLTAAKTSHGSTSSSLYKSAGGAITSLLNQLVDEAYLRGD
APSSSPSPGSISGILSTAPTNSRGSPDKGYASGSGPRCGVLALGAAIRQP
GGSPSLRKIGLARTGITKVEASKLARALRQRPAESPLEDVEIGMNGLHAK
VMRDVRSAVEDRSALTSGTPTARLGSRSRERNDAPSEETQGSEEGSSQEP
CRRRRPRTRSVDGKNSLGKHGERLSGGIGSQDRMVGRSRRKATGDPHGEQ
QDFDGEAKRHAVVKKYVPPAEGKVELRVFGRKVASFGEASERKDLGIDVE
VFGKRARFGSPSSARSSSSSFVSSTPTSSRTHRASPTPDDGDEWDDLPLQ
YFEDDDGEDPLEEWREDDRRGGLDDEGGDGDDLVHGGLSYLDDVDEDHSG
DGDDECNDDRYDDRYDDHYDDHDGVEDDEDHDDDEDDLDDDEDDFDDGDD
DLDDDEDDFDDGDDDLDDDEDGEDGDKFHEYDEEEDYHEDARGNLRSDED
VSGGDDDYDDRDDARGVDQPGKRRSGNKHTFGRAVPHRRGSTRIPREEVW
EGEDVPGLEKNWEVLKGGSSHGRDRAEVDEPRPHKRKSKSTRRHRKRDG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf