prot_D-dichotoma_M_contig1077.672.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig1077.672.1
Unique Nameprot_D-dichotoma_M_contig1077.672.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length237
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1077.672.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 42..66
e-value: 33.0
score: 9.0
coord: 138..162
e-value: 240.0
score: 1.9
coord: 90..114
e-value: 40.0
score: 8.3
coord: 186..210
e-value: 19.0
score: 10.9
coord: 18..41
e-value: 43.0
score: 8.0
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..236
e-value: 3.2E-71
score: 242.4
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 44..103
e-value: 6.1E-7
score: 29.1
NoneNo IPR availablePANTHERPTHR27008:SF343coord: 65..187
NoneNo IPR availablePANTHERPTHR27008:SF343coord: 1..115
coord: 91..229
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 65..187
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 1..115
coord: 91..229
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 2..229

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig1077contigD-dichotoma_M_contig1077:82155..88823 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig1077.672.1mRNA_D-dichotoma_M_contig1077.672.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig1077 81690..89330 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig1077.672.1 ID=prot_D-dichotoma_M_contig1077.672.1|Name=mRNA_D-dichotoma_M_contig1077.672.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=237bp
MLNNNTLNGTIPPQLSCLTSLVVLNVGNNKLSGTIPPQLSCLTALRYLHV
GENELSGDIPPQLSRLTALEYLILSKNMLNGTIPPQLSCLTALVFLNVGN
NKLSGNIPPQLSRLTALEDLVLNNNTLNGTIPPQLSCLTALVFLNVGNNK
LSGGIPLQLSSLKALTDVRLYSNKLSGPIPPQLSCLTALRILNLGENELS
GDIPPQLSSLTAIEQLSLTRNKLSGPIPRSSAASQL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt