prot_D-dichotoma_M_contig106.547.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig106.547.1
Unique Nameprot_D-dichotoma_M_contig106.547.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length788
Homology
BLAST of mRNA_D-dichotoma_M_contig106.547.1 vs. uniprot
Match: D7FQS3_ECTSI (F-box, zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQS3_ECTSI)

HSP 1 Score: 441 bits (1135), Expect = 3.910e-141
Identity = 284/683 (41.58%), Postives = 367/683 (53.73%), Query Frame = 0
Query:  144 VVTSLEQALDSCPAMPGAVLETSVEACLRRSFPGITGSSTTVGS---FTGVVLMLVTRAPRSLGSVIVPLLVRFVAETSCG---------AHADADDDCRSSLACKSCAIARASPDIGEDGGQAPRTR--LCDKQRKRDTVLRSLLHWVADAHFRQCSRVLQISLYRTVLDGVQQTMEASATAASWTASSSAFPVACRLLLAFVGTVAGDGGAHICSFLQDRCRLELRALLAG---------LRSRQLTSTQLAHGQAAHTR---FPMLQAYVGHLCLCRHIQDSTAREHLLWLIRQTLAVFRLV----EGDDHTEAMGGRHGRRDYLVALRDLCHAVALVLTRPTQQQGASAAVPEGGGELLEIIFDSEARPLAGLPRPLAINAVGILKRAGHLQLARTGALL-----------GPSPKRPCSTAG--VTSWQDEPSRECYSSDFRGAPIAFKRSWSFAAAGLRMEFPSL----RPCEVVESEDDDSLVDEDGVSPQDQVGDAGARETPSSNQWDLLPEEAVMVVLSFLTPKRICRLTCVDRAWRDLAGLPRIWRPFFEARWSPKALENEQSLAEVTNELVGIRQLHGDRPGRRHMFVKTPRVYFWAGQEARGGGSGSV---DWCTLYRNRHRAEVDAR-RLCARTEAPWRVCPFLGCGSLLKS--GIKQHMKTHKRPRQGR 773
            +V+ L+ ALD+CPAMP   LETS+E CLRR  PG   +    GS   F   VL LV+ +PRSL   +V +LVRFVA   C          A  +   D R    C SC+ A +    G D  +  R R   C+ Q KRD VL S+L W  D HFRQCSR+LQ S+ R V  GV+Q + A A  +   AS  +FP+ CRLLL+FVG +AGDGGA I  FL++RC  E+R  L            R R+      A G+    R    PML AYVGHLCLCRH+ D  +  HL+WL RQ LAV R++    EG   T A   R    ++   L  L HA+AL+LTRP +    S+ VPE  G LLEI+FDS+ RPL+ +PRPLA  A+ +LK AGHLQLAR+  LL             + +R  S  G    +  +E +      DF+ A +AF+ SWS AAAG+ M+ PS     R        D                GD       + N W  +P+E  + V SF+TPKR+CRL CVDRAWR+L  +  +WRPFFEARW   A+ ++  L  V++ L+        +  +R        V  W   E   G    +   DW  LYR+RHRAE  AR R  A+TE PW VCPFLGC S LKS   +K+H++THKRPR+ R
Sbjct:   18 LVSGLQGALDACPAMPTLTLETSIEDCLRRPSPG--AAVWAFGSTRMFVSGVLSLVSSSPRSLCQAVVSVLVRFVAGDGCDTLDDSLALDAEGEETQDRRRRSRCLSCSTALSDNAAGTDASETERARPQCCNAQEKRDLVLESMLRWAVDVHFRQCSRLLQASVNRAVCHGVRQALVA-AELSRRQASPPSFPLGCRLLLSFVGGLAGDGGAQIAGFLRERCGAEMRRFLTRGRWRPPSGTARGRRHADAWTATGRGVARRQPELPMLDAYVGHLCLCRHVSDPLSATHLVWLARQALAVLRMLDMPEEGAPGTTAAPERRQNSNFEAVLASLSHALALLLTRPKRGGVCSSIVPETVGNLLEIVFDSDPRPLSCVPRPLAEAAIDVLKEAGHLQLARSDELLRLPWGSRRGEPNAAGRREESKLGPVAATVTEEGASFASGIDFQRASLAFRNSWSLAAAGVDMQLPSTNHSGRSRRGDGGGDSXXXXXXXXXXXXSADGDVDGARAIAGNGWGRVPDEVTLRVFSFMTPKRVCRLACVDRAWRELLTVSGVWRPFFEARWPLTAIGSDLDLVGVSDRLLAEGLGSARKNAKRRRRHGKIGVVHWRTSEDTSGQQQPLLERDWMALYRDRHRAERAARGRFAAKTEFPWLVCPFLGCVSSLKSEFAVKRHVRTHKRPREKR 697          
BLAST of mRNA_D-dichotoma_M_contig106.547.1 vs. uniprot
Match: A0A6H5JX00_9PHAE (F-box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX00_9PHAE)

HSP 1 Score: 335 bits (858), Expect = 7.740e-102
Identity = 212/516 (41.09%), Postives = 271/516 (52.52%), Query Frame = 0
Query:  236 CKSCAIARASPDIGEDGGQAP--RTRLCDKQRKRDTVLRSLLHWVADAHFRQCSRVLQISLYRTVLDGVQQTMEASATAASWTASSSAFPVACRLLLAFVGTVAGDGGAHICSFLQDRCRLELRALLAG---------LRSRQLTSTQLAHGQAAHTR---FPMLQAYVGHLCLCRHIQDSTAREHLLWLIRQTLAVFRLV----EGDDHTEAMGGRHGRRDYLVALRDLCHAVALVLTRPTQQQGASAAVPEGGGELLEIIFDSEARPLAGLPRPLAINAVGILKRAGHLQLARTGALLGP-----------SPKRPCSTAG--VTSWQDEPSRECYSSDFRGAPIAFKRSWSFAAAGLRMEFPSL----RPCEVVESEDDDSLVDEDGVSPQDQVGDAGARETPSSNQWDLLPEEAVMVVLSFLTPKRICRLTCVDRAWRDLAGLPRIWRPFFEARWSPKALENEQSLAEVTNELVGIRQLHGDRPGRRHMFVKTPRVYFWAGQEARGGGSGSV 716
            C SC+ A +    G D  +    R + C  Q KRD VL S+L W  D HFRQCSR+LQ S+ R V  GV+Q + A A  +   AS  +FP  CRLLL+FVG +AGDGGA I  FL++RC  ELR  LA           R R+   T  A G A   R    PML AYVGHLCLCRH+ D  A  HL WL RQ L V R++    EG   T A   R    ++   L  L HA+AL+LTRP +    S+ VPE  G LLEI+FDS+ARPL+ +PRPLA  A+ +LK AGH+QLAR+  LL P           + +R  S  G    +  +E +      DFR A +AF+ +WS AAAG+  + PS     R        D                GD       + N W  +P+E  M VLSF+TPKR+CRL CVDRAWR+L  +  +WRPFFEARW   A+ ++  LA V++ L+        +  +R        V  W   E R GG   V
Sbjct:   54 CLSCSAALSDNPAGTDASETEGARPQCCSAQEKRDVVLESMLRWAVDVHFRQCSRLLQASVNRAVCHGVRQALVA-AELSMRQASPPSFPPGCRLLLSFVGGLAGDGGAQIAGFLRERCGAELRRFLARGRWRPPSGTCRGRRHADTCTATGGAVAGRQAESPMLDAYVGHLCLCRHVSDPLAATHLAWLARQALTVLRMLDMPEEGAHETTAAAERRQSSNFADVLASLSHALALLLTRPKRGGLCSSTVPETAGNLLEIVFDSDARPLSCVPRPLAEAAIDVLKEAGHIQLARSDELLRPPRGSRRGEPNAAGRRTKSKLGPVAATVTEEGASFASGIDFRRASLAFRSTWSLAAAGVDTQLPSTSRSGRSRRGDGGGDSSXXXXXXXXXXXXADGDVDGAGAIAGNGWGRVPDEVTMRVLSFMTPKRVCRLACVDRAWRELLMVSGVWRPFFEARWPLSAIGSDLDLAGVSDRLLAEGLGSARKKAKRRRRHGKIGVVHWRTPEGRKGGKRKV 568          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig106.547.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQS3_ECTSI3.910e-14141.58F-box, zinc finger protein n=1 Tax=Ectocarpus sili... [more]
A0A6H5JX00_9PHAE7.740e-10241.09F-box domain-containing protein n=1 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainPROSITEPS50181FBOXcoord: 608..654
score: 9.391
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 597..728

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig106contigD-dichotoma_M_contig106:75108..81105 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig106.547.1mRNA_D-dichotoma_M_contig106.547.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig106 75051..81516 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig106.547.1 ID=prot_D-dichotoma_M_contig106.547.1|Name=mRNA_D-dichotoma_M_contig106.547.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=788bp
MTTTKGWEYLEKLSSILRDFSKLYIEADDADEDGRQVAIVEWRQGLTSLF
KNLLVSCGSGSQESSEDLWLHFDFSPFCSVLSHSCCDWFSREAFLSGLAS
EVTTVLLQVQSELPISTPAIVYVLLHRLATRRANREDTEHLDTVVTSLEQ
ALDSCPAMPGAVLETSVEACLRRSFPGITGSSTTVGSFTGVVLMLVTRAP
RSLGSVIVPLLVRFVAETSCGAHADADDDCRSSLACKSCAIARASPDIGE
DGGQAPRTRLCDKQRKRDTVLRSLLHWVADAHFRQCSRVLQISLYRTVLD
GVQQTMEASATAASWTASSSAFPVACRLLLAFVGTVAGDGGAHICSFLQD
RCRLELRALLAGLRSRQLTSTQLAHGQAAHTRFPMLQAYVGHLCLCRHIQ
DSTAREHLLWLIRQTLAVFRLVEGDDHTEAMGGRHGRRDYLVALRDLCHA
VALVLTRPTQQQGASAAVPEGGGELLEIIFDSEARPLAGLPRPLAINAVG
ILKRAGHLQLARTGALLGPSPKRPCSTAGVTSWQDEPSRECYSSDFRGAP
IAFKRSWSFAAAGLRMEFPSLRPCEVVESEDDDSLVDEDGVSPQDQVGDA
GARETPSSNQWDLLPEEAVMVVLSFLTPKRICRLTCVDRAWRDLAGLPRI
WRPFFEARWSPKALENEQSLAEVTNELVGIRQLHGDRPGRRHMFVKTPRV
YFWAGQEARGGGSGSVDWCTLYRNRHRAEVDARRLCARTEAPWRVCPFLG
CGSLLKSGIKQHMKTHKRPRQGRGTVKRSRRLKGPSQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
IPR036047F-box-like_dom_sf