prot_D-dichotoma_M_contig106.544.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig106.544.1
Unique Nameprot_D-dichotoma_M_contig106.544.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length363
Homology
[Close]
BLAST of mRNA_D-dichotoma_M_contig106.544.1 vs. uniprot
Match: A0A6H5K1Y5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K1Y5_9PHAE)

HSP 1 Score: 275 bits (703), Expect = 1.180e-84
Identity = 172/397 (43.32%), Postives = 233/397 (58.69%), Query Frame = 0 
Query:    2 EELARDGLEAAKGAFGDVLDHVSEEISGTFESLLSDTLSEENLREASSTWRRFLDTPGIKVLVRNRSLWAGAEQAVQRHLNSLMSERTANLAERMVNATADFALHFAGLPQNSDKSDFEVFQELSSKMCHLQVAAEKLLPMVSGAMRLLGYESYVATAGKFVRAQAISRITLTVCATTLMGLEPERDPFVLSVIASFSLGHLTKDAALNMAAFFQKAILEA---SAPGEDIAXXXXXXXXXADPGQSRAVDFVTELFNCESTCDDLGRQVFGFLEVVKRAVP----------------------ESLHGMPEG----------GSTRSPRKLGVDGMVLRATLQAAAVLNEASVSTVTLSILLILVVQVAWLSSVRCCLRHLF-----PRAPVRGPG 358
            E L +D   AA+G FGDV    ++E+  +FE+ LS+ LSE N+R AS  WRR LDTPG+++L ++R LWAGAE+AV+R+L+  +SE++A  A+R VNATADFALHFAGL +N+ KSD EVF+ELS K+CHLQ AAEKL P+   A+ LLGY+ Y       +R+ A+SR+T TV AT L+GL P RDPF+L++IASFSLGHL+KD A NMAAFFQK +++      P    +           P     VD  TEL     TC +LG Q F F +VV+RA+                       E+   + EG          G  R+PRKL ++G+VLR  +  AAV++    S   L + L++   + + S   CC R L      PR   +G G
Sbjct:  117 EGLKKDIERAAQGVFGDVFGEAADEVLASFETRLSEALSEGNVRAASQLWRRLLDTPGVQLLAQDRRLWAGAEKAVRRYLSGFLSEKSAKEAQRAVNATADFALHFAGLSRNAAKSDHEVFEELSHKLCHLQGAAEKLWPLAVLALPLLGYQDYAKKLESAIRSNALSRVTQTVSATVLLGLNP-RDPFLLTLIASFSLGHLSKDVAQNMAAFFQKVLVDQVRFDQPQTKQSLSDAEGAPLLSP-----VDLATELVTGTKTCQELGHQAFAFFKVVQRALEGSSPSFVVESVDVNDNGVHPSTEASTALQEGRPPPQPLQQRGPRRTPRKLKLEGIVLRQAIWVAAVIDSKYFSLEVLVVCLVVGCVLVFGSIWVCCWRGLRDKRGRPRMIKKGRG 507
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig106.544.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K1Y5_9PHAE1.180e-8443.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 325..345
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 346..362
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..324

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig106contigD-dichotoma_M_contig106:48938..58536 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig106.544.1mRNA_D-dichotoma_M_contig106.544.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig106 47254..60688 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig106.544.1 ID=prot_D-dichotoma_M_contig106.544.1|Name=mRNA_D-dichotoma_M_contig106.544.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=363bp
MEELARDGLEAAKGAFGDVLDHVSEEISGTFESLLSDTLSEENLREASST
WRRFLDTPGIKVLVRNRSLWAGAEQAVQRHLNSLMSERTANLAERMVNAT
ADFALHFAGLPQNSDKSDFEVFQELSSKMCHLQVAAEKLLPMVSGAMRLL
GYESYVATAGKFVRAQAISRITLTVCATTLMGLEPERDPFVLSVIASFSL
GHLTKDAALNMAAFFQKAILEASAPGEDIAGERVAGERVADPGQSRAVDF
VTELFNCESTCDDLGRQVFGFLEVVKRAVPESLHGMPEGGSTRSPRKLGV
DGMVLRATLQAAAVLNEASVSTVTLSILLILVVQVAWLSSVRCCLRHLFP
RAPVRGPGRSED*
back to top