prot_D-dichotoma_M_contig1054.508.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig1054.508.1
Unique Nameprot_D-dichotoma_M_contig1054.508.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length625
Homology
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BLAST of mRNA_D-dichotoma_M_contig1054.508.1 vs. uniprot
Match: A0A6H5KG66_9PHAE (PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG66_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 6.350e-51
Identity = 135/312 (43.27%), Postives = 161/312 (51.60%), Query Frame = 0 
Query:    2 SDQGSRRRRG--RSHSFCISLVPCSAREVSRTARDSSRSGVSSHCFELYTGTRVHVFRAESRAMQVVWMNSIQRLARQAAEDSYISLAEHMVCDEEHARCRRLNSVLTSALGRRSCNALEADGYGEG------PGRVFHEGGSAEAELLAGKSGSAPPLRPLLGTFGLLQRLPS------------KYFPSPSPHPASVSPTRNALSQGRAGKALGRVHDEDTGVLGTGFGVXXXXXXXXXXXXXXGASAKLSAESVRRGLRFCMKVHRFREVCRYRSCVRAWKRWAFAADALEELCPGASDLA------HW 287
            S+Q  RRR G  RSHSF ++LVP  AR V+     S       HCFEL++  RVH FRAESRA QV W+ ++QR ARQAAEDSY+S+AEHMVCDEE+ARCRRLN  L+SALG R+C+ LEA+ Y          GR    GGS     L       P   PL  T GL +RLP                      P  VS +++                 D G   +                       L+A  VRR +RFCMKVHR+RE+CR  SCV   KRWA+AADALEELCPGAS  A      HW
Sbjct:  479 SEQSGRRRGGGGRSHSFSLALVPSVARAVNHPTAPS-------HCFELHSHNRVHTFRAESRAKQVAWVGTLQRHARQAAEDSYMSVAEHMVCDEEYARCRRLNVALSSALGSRTCDTLEAEFYSSHVADRPVAGRCSSGGGSVGGGWLP-----LPHPTPLPRTSGLFRRLPQGPXXXXXXXXXXXXXXXXRATPGLVSGSQSXXXXXXXXXXXXLARSADGGATASS----ARGAAGGGATIDSAERPWLAASEVRRAMRFCMKVHRYREICRPGSCVAFRKRWAYAADALEELCPGASTTAAADLSRHW 774
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BLAST of mRNA_D-dichotoma_M_contig1054.508.1 vs. uniprot
Match: D8LCW3_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCW3_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 3.350e-49
Identity = 148/302 (49.01%), Postives = 171/302 (56.62%), Query Frame = 0 
Query:    2 SDQGSRRRRG-RSHSFCISLVPCSAREVSRTARDSSRSGVSSHCFELYTGTRVHVFRAESRAMQVVWMNSIQRLARQAAEDSYISLAEHMVCDEEHARCRRLNSVLTSALGRRSCNALEADGYGEGPGR--VFHEGGSAEAELLAGKSGSAPPLRPLLGTFGLLQRLPSKYFPSPSPHPASVSPTRNA--LSQGRAGKALGRVHDEDTGVLGTGFGVXXXXXXXXXXXXXXGA--SAK---LSAESVRRGLRFCMKVHRFREVCRYRSCVRAWKRWAFAADALEELCPGASDLA------HW 287
            S+Q  RRR G RSHSF ++L P                   SHCFEL++  RVH FRAESRA QV W+ ++QR ARQAAEDSY+S+AEHMVCDEE+ARCRRLN  L+SALG R+C+ LEAD Y        V   G S             PP  PL  T GL +RLP    P+     A+ S  R    L  G     L                 XXXXXXXXXXXXXX    SA+   L+A  VRR +RFCMKVHR+RE+CR  SCV   KRWA+AADALEELCPGAS  A      HW
Sbjct:  527 SEQSGRRRGGGRSHSFSLALAP-------------------SHCFELHSQNRVHTFRAESRAKQVAWVGTLQRHARQAAEDSYMSVAEHMVCDEEYARCRRLNVTLSSALGSRACDTLEADFYSSHAADRPVAGRGSSGXXXXXXXGWLPLPPPSPLPRTSGLFRRLPQGPPPTTYSASAAASAVRATPGLVSGCRSPLLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATVDSAERPWLAASEVRRAMRFCMKVHRYREICRPGSCVAFRKRWAYAADALEELCPGASTAAAADLSRHW 809
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1054.508.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KG66_9PHAE6.350e-5143.27PH domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D8LCW3_ECTSI3.350e-4949.01PH domain-containing protein n=1 Tax=Ectocarpus si... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 6..84
e-value: 5.5E-7
score: 31.2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..624
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 17..80
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 1..76
score: 7.558

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig1054contigD-dichotoma_M_contig1054:230836..239323 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig1054.508.1mRNA_D-dichotoma_M_contig1054.508.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig1054 213794..239963 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig1054.508.1 ID=prot_D-dichotoma_M_contig1054.508.1|Name=mRNA_D-dichotoma_M_contig1054.508.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=625bp
MSDQGSRRRRGRSHSFCISLVPCSAREVSRTARDSSRSGVSSHCFELYTG
TRVHVFRAESRAMQVVWMNSIQRLARQAAEDSYISLAEHMVCDEEHARCR
RLNSVLTSALGRRSCNALEADGYGEGPGRVFHEGGSAEAELLAGKSGSAP
PLRPLLGTFGLLQRLPSKYFPSPSPHPASVSPTRNALSQGRAGKALGRVH
DEDTGVLGTGFGVGSGAGGAGVSVGEGGASAKLSAESVRRGLRFCMKVHR
FREVCRYRSCVRAWKRWAFAADALEELCPGASDLAHWTTQTKVGSSGEVG
SRESSASAEGGAVGVLAGLANTEATRSNSVSPTLKPSADDALVENSAPPT
GVASVDACPADTAASVAASATPATAAIAPDDEVPGAALEVKSTDHVEASG
SSVLAAHVQAPAVAAATAAVAQSSAEASGILKNDGGITVLVGDLQEAAGG
KGAEIPATVTATELGSSSNAEGSAEGVPTASALPIASLVQRRTLPLQGRL
PVLPMPLLPVSVENIVEVAAAVQEYRTSVPSSGSNARSRVFQGRSGGGGL
LRDVSNSSDDMATEHAWNGHNRELNVGGKARSDGAPSAGSPEAAATMLNR
YEEGPPDDLLDSLLNQVIRFLGDD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011993PH-like_dom_sf
IPR001849PH_domain