prot_D-dichotoma_M_contig1010.183.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig1010.183.1
Unique Nameprot_D-dichotoma_M_contig1010.183.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length349
Homology
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BLAST of mRNA_D-dichotoma_M_contig1010.183.1 vs. uniprot
Match: A0A6H5JAQ4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAQ4_9PHAE)

HSP 1 Score: 264 bits (675), Expect = 4.530e-83
Identity = 147/281 (52.31%), Postives = 185/281 (65.84%), Query Frame = 0 
Query:   43 CCVPPYSVVDCTGSGDSSNQAQQFTCVDTSAMSACMACHVRDSVSVASCSSCCTSDESFGCQPASRAGGAVLSDWQFYASTVFFVCLCCCFSVLCGFTEVRRKKKGISFAEAWSIPQAMPILRTWPRRSVSVSDAMPELAGE-GDGWSPLSDDEEDLKRYPVAGLVDDTGVAYGFATSMPQSLLDSVSTSMRRQASPVAPLSDSPQEPELTVWISRDG----AYFRPTNAVAQGEGE---TGAERHRDTETSARNAG-------------VMNDSLEQPLM 302
            CC+ P+S  DCTG+G  ++  + +TC+D S +S+CM+C      S  SC +CC S E+  C         V S+W FYAST+FF+CLCCCF+ LCG TEVRRKKKGISFA+AWS+PQAMPILRTWPRRS S SD M +  GE G  W+ LSDDEEDLKRYPVAGLVDD+G+A+GF T++PQ+LL SV+TS+R+  SP  P   SPQEPELTVWISRD     A       +  G G    TG E +   E+S  ++G             V+ + LE+PLM
Sbjct:   29 CCITPFSYFDCTGTGHLASPGKLYTCIDVSEVSSCMSCLRNADYSDVSCDTCC-SIENLDCTK-------VDSEWDFYASTLFFICLCCCFTALCGLTEVRRKKKGISFAQAWSVPQAMPILRTWPRRSASSSD-MSQAGGEVGTQWAALSDDEEDLKRYPVAGLVDDSGMAFGFVTTLPQTLLSSVATSLRQAGSPSPP---SPQEPELTVWISRDNEGASASAPAHRGIGGGSGASAVTGVEANSSEESSRGSSGATRAAGGRQQRAVVVGNDLEEPLM 297
[Close]
BLAST of mRNA_D-dichotoma_M_contig1010.183.1 vs. uniprot
Match: A0A6H5L5L4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L4_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 2.130e-5
Identity = 51/162 (31.48%), Postives = 74/162 (45.68%), Query Frame = 0 
Query:   29 VEGRALLSSDDSTGCCVPPYSVVDCTGSGDSSNQAQQFTC--VDTSAMSACMACHVRDSVSVASCSSCCTSDESFGCQPASRAGGAVLSDWQFYASTVFFVCLCCCFSVLCGFTEVRRKKKGISFAEAWSIPQAMPILRTWPRRSVSVSDAMPELAGEGDGW 188
            V    LL    +  CC  P + ++C  SG      +++ C  V++    AC++C +    S   C+ CC +  +  C     + GAVL+      S VF  C     S +    E RRK+KGIS A AWSIPQ MP+LR       +V+D    + G    W
Sbjct:   53 VVSCVLLGGGLAQNCCSGPDAEIECVESG-VDYLGERYYCMHVESPQTRACVSC-IPSRSSSTKCAYCCGTPNA-ECD-LEWSWGAVLATLS--VSAVFATC-----SGILALAEKRRKRKGISLARAWSIPQGMPVLRA------TVTDLSDAVRGRASIW 197
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1010.183.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JAQ4_9PHAE4.530e-8352.31Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5L5L4_9PHAE2.130e-531.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 117..139
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..29
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 140..348
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..116
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..31
score: 0.693
NoneNo IPR availableTMHMMTMhelixcoord: 117..139
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig1010contigD-dichotoma_M_contig1010:207986..224054 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig1010.183.1mRNA_D-dichotoma_M_contig1010.183.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig1010 207811..225121 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig1010.183.1 ID=prot_D-dichotoma_M_contig1010.183.1|Name=mRNA_D-dichotoma_M_contig1010.183.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=349bp
MKTSSRVQHYGVFFHVLAILWTFLSSSGVEGRALLSSDDSTGCCVPPYSV
VDCTGSGDSSNQAQQFTCVDTSAMSACMACHVRDSVSVASCSSCCTSDES
FGCQPASRAGGAVLSDWQFYASTVFFVCLCCCFSVLCGFTEVRRKKKGIS
FAEAWSIPQAMPILRTWPRRSVSVSDAMPELAGEGDGWSPLSDDEEDLKR
YPVAGLVDDTGVAYGFATSMPQSLLDSVSTSMRRQASPVAPLSDSPQEPE
LTVWISRDGAYFRPTNAVAQGEGETGAERHRDTETSARNAGVMNDSLEQP
LMDEDGVEHDGDGSRDSLRSHHPSGSPGSMTRSDLEAQGSDAGVVVGR*
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