prot_D-dichotoma_M_contig1005.136.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig1005.136.1
Unique Nameprot_D-dichotoma_M_contig1005.136.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length216
Homology
BLAST of mRNA_D-dichotoma_M_contig1005.136.1 vs. uniprot
Match: D7G9H3_ECTSI (Clathrin light chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9H3_ECTSI)

HSP 1 Score: 217 bits (553), Expect = 3.910e-68
Identity = 141/240 (58.75%), Postives = 164/240 (68.33%), Query Frame = 0
Query:    1 MDGADDFYTGGPAEGGVVDAANGDGSPE----GYADLGGGDYG-TGGDYAA-------FDPQQASVNSEPQSNGYNTGVGGFTQ---GYTSLDEQGDD----------PGMGLPAPEDVQPSALDDFMRSWQETLEEKAAIESQAKAAALEAAKADLETHGLERAAKKDAKMVRNREQEQVFLEQLEGELESENPWERVVSMVDTQVAIVDDFKDKSRMTSILIQLKNDPLDTSTRAAAS 215
            MDG DDF+TG        DA      PE    GY DLG G+YG TGGDY         FD Q     ++    G++ G+G F Q   GY +LD+              P MG+PAPEDV+PSALD+FM  WQ  L EKA IE++AKAAALEAAKADLETH +ERAA K+AKM +NREQEQ+FLEQLEGELESENPWERVVS+VDTQ  +V+DFKD SRMTSILIQLKNDP+DTS+ AAAS
Sbjct:    1 MDGGDDFFTG------AEDA------PEQQQGGYNDLGSGEYGATGGDYGXXXXXXXXFDQQPNGEVAQANGTGFDNGMG-FQQDNMGYATLDDPSGGSXXXXXXXXMPDMGMPAPEDVEPSALDEFMERWQAGLVEKARIEAEAKAAALEAAKADLETHSVERAANKEAKMGQNREQEQIFLEQLEGELESENPWERVVSLVDTQSEVVEDFKDTSRMTSILIQLKNDPIDTSSTAAAS 227          
BLAST of mRNA_D-dichotoma_M_contig1005.136.1 vs. uniprot
Match: A0A835YIR5_9STRA (Clathrin light chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIR5_9STRA)

HSP 1 Score: 121 bits (304), Expect = 6.850e-31
Identity = 88/187 (47.06%), Postives = 107/187 (57.22%), Query Frame = 0
Query:   26 SPEGYADLGGGDYGTGGDY---AAFDPQQASVNSEPQSNGYNTGVGGFTQGYTSLDEQGDDPGMGLPAPEDVQPSALDDFMRSWQETLEEKAAIESQAKAAALEAAKADLETHGLERAAKKDAKMVRNREQEQVFLEQLEGELESENPWERVVSMVDTQVAIVDDFKDKSRMTSILIQLKNDPLDTS 209
            S EGY D GG DY  GG Y    A D QQ       Q  G    + G           G     G+PAPE+V  +AL  FM  W+  L+EKA  E  AK  AL+AA+ D +    ER  KK+ +M  NR QEQVFLEQLE +LESENPWER+VS+VDTQ      FKD SR+ +++IQLKNDP+  S
Sbjct:   25 SAEGYTDFGG-DY-VGGGYKGGGAEDYQQQ------QDAGQYGSLDGDEMNPAEDGSNGHMAFQGMPAPEEVADNALTRFMGEWEAKLKEKAQAEEAAKQQALQAARGDHDKFFAERELKKETRMNSNRTQEQVFLEQLESDLESENPWERIVSLVDTQAEPSGPFKDTSRIKTMIIQLKNDPIHAS 203          
BLAST of mRNA_D-dichotoma_M_contig1005.136.1 vs. uniprot
Match: A0A7S3Y6V3_HETAK (Clathrin light chain n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6V3_HETAK)

HSP 1 Score: 109 bits (272), Expect = 1.560e-25
Identity = 77/169 (45.56%), Postives = 100/169 (59.17%), Query Frame = 0
Query:   50 QQASVNSEPQSNGYNTGVGGFTQGYTSLDEQGDDPG-----MGLPAPEDVQPSALDDFMRSWQETLEEKAAIESQAKAAALEAAKADLETHGLERAAKKDAKMVRNREQEQVFLEQLEGELESENPWERVVSMVDTQVAIVDDFKDKSRMTSILIQLKNDPLDTSTRAA 213
            QQ +   EPQ        GG   GY++LD   D  G     MG P    +  +ALDDFM  W++ L EK A+E QA   A + AKA+L+    ++    +AKM +NR +EQV LEQLE +LES+NPWER+ ++VD Q     D  DKSRM SILIQLKN+PL+    AA
Sbjct:  107 QQYTTMEEPQ-------FGGEDVGYSNLDATQDMMGGAQMMMGEPH---MMRTALDDFMDKWEQELREKRAVEEQAAEEAKQKAKAELDHFYAQKEKTFEAKMSKNRSEEQVLLEQLEADLESDNPWERITNLVDLQAE--GDDVDKSRMRSILIQLKNEPLEVKAGAA 263          
BLAST of mRNA_D-dichotoma_M_contig1005.136.1 vs. uniprot
Match: A0A7S2UWZ8_9STRA (Clathrin light chain n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWZ8_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 2.410e-17
Identity = 54/126 (42.86%), Postives = 79/126 (62.70%), Query Frame = 0
Query:   81 GDDPGMGLPAPEDVQPSALDDFMRSWQETLEEKAAIESQAKAAALEAAKADLETHGLERAAKKDAKMVRNREQEQVFLEQLEGELESENPWERVVSMVDTQVAIVDDFKDKSRMTSILIQLKNDPL 206
            GDDP   L  PE V  +ALDDF   W+E L EKA +E Q     ++ AK +L+    E+  +++++  +NR+ EQ  LE+LE +LE EN WERV S+VD  +   +D  D+SRM +++ QLK +PL
Sbjct:   84 GDDP---LEIPEPVARTALDDFEEQWKEKLAEKAELERQTTQETIQKAKQNLDKFYDEKRVQRESRQSKNRQLEQSMLEKLEADLECENAWERVSSLVDLTLDGGEDAPDQSRMVALITQLKREPL 206          
BLAST of mRNA_D-dichotoma_M_contig1005.136.1 vs. uniprot
Match: A0A7S2GYA0_9STRA (Clathrin light chain n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GYA0_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 7.250e-14
Identity = 56/144 (38.89%), Postives = 82/144 (56.94%), Query Frame = 0
Query:   66 GVGGFTQGYTS---LDEQGD-DPGMGLPAPEDVQPSALDDFMRSWQETLEEKAAIESQAKAAALEAAKADLETHGLERAAKKDAKMVRNREQEQVFLEQLEGELESENPWERVVSMVDTQVAIVDDFKDKSRMTSILIQLKNDP 205
            G  G  +G T    L++ GD DP   + A  ++ P A   +   WQ TL ++   E+ AKA  +E A+ DLE    ER A+++AKM RNR +EQ  LE LE +LE++N W+RVV +V+      +  +D  RM  + I LKN+P
Sbjct:   66 GFAGVPEGETGAVLLEDVGDEDPDEEVEAEPELSPMAK--WNNEWQVTLMQRKDEENAAKAKDVEQARVDLEKFQAEREARREAKMARNRSEEQDKLEALEADLENDNSWQRVVKLVELTQDSAEASEDTKRMKDVFILLKNEP 207          
BLAST of mRNA_D-dichotoma_M_contig1005.136.1 vs. uniprot
Match: A0A2D4BVD7_PYTIN (Clathrin light chain n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BVD7_PYTIN)

HSP 1 Score: 74.3 bits (181), Expect = 1.490e-12
Identity = 58/157 (36.94%), Postives = 83/157 (52.87%), Query Frame = 0
Query:   83 DPGMGLPAPEDVQPSALDDFMRSWQETLEEKAAIESQAKAAALEAAKADLETHGLERAAKKDAKMVRNREQEQVFLEQLEGELESENPWERVVSMVDTQV-------------------------AIVDDFKDKSRMTSILIQLKNDPLDTSTRAAA 214
            +P   +PA E+   + L  FMR ++  + +KA  + +      E AK D++    ER+ KK++K   NR QEQ  LE+L  +LESENPWERVVS+VD +V                         +  +D +D SRM  + +QLK +PLD  TRAAA
Sbjct:   86 EPMASMPAVEED--NELTKFMRQYEAEIAQKAQEQEKVGVECKEKAKKDMDQFQTERSRKKESKQQANRVQEQATLEKLAADLESENPWERVVSLVDLEVNRKQKLAALNNKKDAKNKEPEPVKSSKKEDEEDLSRMRQLFVQLKAEPLD-KTRAAA 239          
BLAST of mRNA_D-dichotoma_M_contig1005.136.1 vs. uniprot
Match: A0A1E7F8N1_9STRA (Clathrin light chain n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F8N1_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 2.440e-12
Identity = 48/109 (44.04%), Postives = 65/109 (59.63%), Query Frame = 0
Query:   97 SALDDFMRSWQETLEEKAAIESQAKAAALEAAKADLETHGLERAAKKDAKMVRNREQEQVFLEQLEGELESENPWERVVSMVD-TQVAIVDDFKDKSRMTSILIQLKND 204
            SA+  F   WQ+TL  +   E  AK     AAK  +E    +R AK+DAK+ +NRE EQ  LE +E +LE++N W+RV  MVD TQ   V+D +D  RM  + I LKN+
Sbjct:  134 SAMAKFNAEWQDTLAARKDEEDAAKVEMEAAAKMFMEDFQAKREAKRDAKLAKNREDEQAKLEDIEADLENDNNWQRVSKMVDLTQDGAVEDNEDTKRMRDVFILLKNE 242          
BLAST of mRNA_D-dichotoma_M_contig1005.136.1 vs. uniprot
Match: A0A7R9Y9Z6_9STRA (Clathrin light chain n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y9Z6_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.490e-11
Identity = 48/116 (41.38%), Postives = 68/116 (58.62%), Query Frame = 0
Query:   97 SALDDFMRSWQETLEEKAAIESQAKAAALEAAKADLETHGLERAAKKDAKMVRNREQEQVFLEQLEGELESENPWERVVSMVDTQVAIVDDFKDKSRMTSILIQLKNDPLDTSTRA 212
            +ALDDFM  W++ L EK A+E   +  A+ AA   L+ H  +    +  +   NR  EQV LEQLE E  + NPW+RVV ++D   +      + SRM S++IQ+KN PL+  TRA
Sbjct:   32 TALDDFMEKWEQELAEKRAVEESKRQEAVAAAAKALDEHKKQADIARQKRYETNRNSEQVKLEQLESE-GTGNPWDRVVGLIDV-TSQDSSVANTSRMKSVIIQVKNKPLE-GTRA 144          
BLAST of mRNA_D-dichotoma_M_contig1005.136.1 vs. uniprot
Match: A0A7S2KL96_9STRA (Clathrin light chain (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KL96_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 3.400e-10
Identity = 43/98 (43.88%), Postives = 63/98 (64.29%), Query Frame = 0
Query:   97 SALDDFMRSWQETLEEKAAIESQAKAAALEAAKADLETHGLERAAKKDAKMVRNREQEQVFLEQLEGELESENPWERVVSMVDTQVAIVDDFKDKSRM 194
            SA+  F   +QETL+ +   E+ AKAAA+ AA+ DL T   +R+ K++AKM +NR +EQ  LE +E +LE++N W+RVV +VD      D  +D  RM
Sbjct:   42 SAMAAFNLEFQETLKLRKESENAAKAAAIAAAEEDLATIAAQRSTKREAKMSKNRSEEQSKLEAMEEDLENDNSWQRVVKLVDLTQDGKDGAQDTKRM 139          
BLAST of mRNA_D-dichotoma_M_contig1005.136.1 vs. uniprot
Match: A0A7S2NUU2_9STRA (Clathrin light chain (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NUU2_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 1.750e-9
Identity = 38/83 (45.78%), Postives = 58/83 (69.88%), Query Frame = 0
Query:   97 SALDDFMRSWQETLEEKAAIESQAKAAALEAAKADLETHGLERAAKKDAKMVRNREQEQVFLEQLEGELESENPWERVVSMVD 179
            SA+  F   +QETL+++   E+  KAAALE A+ADL     +R +K++AKM +NR +EQ  LE +E +LE++N W++VV +VD
Sbjct:   43 SAMAAFNEEFQETLKQRKEEENAVKAAALEQAEADLALIAQQRESKREAKMSKNRAEEQSKLEAMEADLENDNSWQKVVKLVD 125          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1005.136.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G9H3_ECTSI3.910e-6858.75Clathrin light chain n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A835YIR5_9STRA6.850e-3147.06Clathrin light chain n=1 Tax=Tribonema minus TaxID... [more]
A0A7S3Y6V3_HETAK1.560e-2545.56Clathrin light chain n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2UWZ8_9STRA2.410e-1742.86Clathrin light chain n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2GYA0_9STRA7.250e-1438.89Clathrin light chain n=1 Tax=Helicotheca tamesis T... [more]
A0A2D4BVD7_PYTIN1.490e-1236.94Clathrin light chain n=1 Tax=Pythium insidiosum Ta... [more]
A0A1E7F8N1_9STRA2.440e-1244.04Clathrin light chain n=1 Tax=Fragilariopsis cylind... [more]
A0A7R9Y9Z6_9STRA1.490e-1141.38Clathrin light chain n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2KL96_9STRA3.400e-1043.88Clathrin light chain (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S2NUU2_9STRA1.750e-945.78Clathrin light chain (Fragment) n=1 Tax=Leptocylin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000996Clathrin light chainPFAMPF01086Clathrin_lg_chcoord: 104..205
e-value: 1.5E-17
score: 64.4
IPR000996Clathrin light chainPANTHERPTHR10639CLATHRIN LIGHT CHAINcoord: 50..205
NoneNo IPR availablePANTHERPTHR10639:SF7CLATHRIN LIGHT CHAINcoord: 50..205

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig1005contigD-dichotoma_M_contig1005:44469..52059 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig1005.136.1mRNA_D-dichotoma_M_contig1005.136.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig1005 44286..52402 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig1005.136.1 ID=prot_D-dichotoma_M_contig1005.136.1|Name=mRNA_D-dichotoma_M_contig1005.136.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=216bp
MDGADDFYTGGPAEGGVVDAANGDGSPEGYADLGGGDYGTGGDYAAFDPQ
QASVNSEPQSNGYNTGVGGFTQGYTSLDEQGDDPGMGLPAPEDVQPSALD
DFMRSWQETLEEKAAIESQAKAAALEAAKADLETHGLERAAKKDAKMVRN
REQEQVFLEQLEGELESENPWERVVSMVDTQVAIVDDFKDKSRMTSILIQ
LKNDPLDTSTRAAAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000996Clathrin_L-chain