mRNA_D-dichotoma_M_contig99.20530.1 (mRNA) Dictyota dichotoma ODC1387m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dichotoma_M_contig99.20530.1
Unique NamemRNA_D-dichotoma_M_contig99.20530.1
TypemRNA
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Homology
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BLAST of mRNA_D-dichotoma_M_contig99.20530.1 vs. uniprot
Match: A0A6H5KEJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEJ8_9PHAE)

HSP 1 Score: 275 bits (702), Expect = 4.240e-86
Identity = 131/221 (59.28%), Postives = 162/221 (73.30%), Query Frame = 2 
Query:  299 FGEKQAGKLYNTEEPLFNFTVLVTGYEPFSTFDFNPAQEVARLLNGTCSTVYLTAPFTFVLCYDGVALPVSSLGSSWAALALEKEPTRWDAVVHLGFESSARGLRLETIAANVEASEEYHHMRNSDVPCSKEGTPFRYIQEGASCILPTTAPLSYLTLDDLTMLLESSGYRDVAAQKTWSRDAGTYFCNEQYFRTLYSVREAAEP---GASLIPVMFVHLP 952
            FGE + G  Y     LF+F VLVTGYEPF     NPAQ VA  LNGTC TVYLT P T  LCY+GV++PV++ GS WAA  LE+ P RWD V+HLGFESSA+GLRLETIAANV+ S+++H++ NSD+PC KEGTPF YI EG+ CILPTTAP+S+L L DL  LL+  G+ D+   +TWSRDAG Y+CNE ++RTL+++RE   P   G+SLIP   V  P
Sbjct:   39 FGEPEPGLEYEFGNALFDFDVLVTGYEPFLDHLVNPAQSVAGSLNGTCDTVYLTPPKTMRLCYEGVSVPVTAEGSGWAARQLEETPARWDGVIHLGFESSAKGLRLETIAANVKTSDDFHYLWNSDIPCQKEGTPFEYIHEGSPCILPTTAPVSFLDLGDLAELLQDGGHADLVTLETWSRDAGAYYCNEMFYRTLHAIRELGTPSVDGSSLIPASDVRSP 259
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BLAST of mRNA_D-dichotoma_M_contig99.20530.1 vs. uniprot
Match: D8LM47_ECTSI (Pyrrolidone-carboxylate peptidase, putative (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM47_ECTSI)

HSP 1 Score: 182 bits (462), Expect = 2.590e-52
Identity = 86/136 (63.24%), Postives = 103/136 (75.74%), Query Frame = 2 
Query:  299 FGEKQAGKLYNTEEPLFNFTVLVTGYEPFSTFDFNPAQEVARLLNGTCSTVYLTAPFTFVLCYDGVALPVSSLGSSWAALALEKEPTRWDAVVHLGFESSARGLRLETIAANVEASEEYHHMRNSDVPCSKEGTPF 706
            FGE + G  Y     LF+F VLVTGYEPF     NPAQ VA  LNGTC TVYLT P T  LCY+GV++PV++ GS WAA  LE+ PTRWD ++HLGFESSA+ LRLETIAANV+ S++YH++ NSD+PC KEGTPF
Sbjct:   39 FGEPEPGLEYEFGNALFDFDVLVTGYEPFLDHLINPAQSVAGSLNGTCDTVYLTHPRTMRLCYEGVSVPVTAEGSGWAARQLEETPTRWDGIIHLGFESSAKSLRLETIAANVKTSDDYHYLWNSDIPCQKEGTPF 174
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BLAST of mRNA_D-dichotoma_M_contig99.20530.1 vs. uniprot
Match: A0A7S4VFG5_9DINO (Hypothetical protein n=2 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4VFG5_9DINO)

HSP 1 Score: 161 bits (407), Expect = 3.550e-42
Identity = 94/223 (42.15%), Postives = 132/223 (59.19%), Query Frame = 2 
Query:  359 VLVTGYEPFSTFDFNPAQEVARLLNGTCSTVYLTAPFTFVLCYDGVALPVSSLGSSWAALALEKEPTRWDAVVHLGFESSARGLRLETIAANVEASEEYHHMRNSDVPCSKEGTPFRYIQEGASCILPTTAPLSYLTLDDLTMLLESSGYRDVAAQKTWSRDAGTYFCNEQYFRTLYSVREAAEPGAS----LIPVMFVHLPHHDIMDLDDMAVMVNFIAESL 1015
            VLVTG+ PF  F  NPA+ VAR +N +C         T   C +   +PV   G++  A  LE+ P  WD VVHLGFE  ++GLRLE +AANVEA+E      N++VPC+K G+ +R +     C+L +TAPL+ L   +L +L      R++     WSRDAG Y+CNE Y+RTL +VR    P AS    L+PV+FVHLP  ++  +++ A  V  +A+ L
Sbjct:  130 VLVTGFLPFGPFKVNPAELVARQVNASC---------TSHCCIESQVIPVDHAGAALPARRLEEGP--WDGVVHLGFEDESKGLRLELVAANVEATEWGGAAWNANVPCNKSGSEWRDLDVRGPCLLASTAPLNGL---ELPLLRRFPSPREI-----WSRDAGAYYCNEVYYRTLQAVRTRLIPPASGQQDLLPVIFVHLPKPEVSSIEESAKFVQDVADRL 333
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BLAST of mRNA_D-dichotoma_M_contig99.20530.1 vs. uniprot
Match: A0A7S4BFQ2_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BFQ2_CHRCT)

HSP 1 Score: 143 bits (361), Expect = 1.200e-34
Identity = 89/225 (39.56%), Postives = 133/225 (59.11%), Query Frame = 2 
Query:  359 VLVTGYEPFSTFDFNPAQEVARLLNGTCSTVYLTAPFTFVLCYDGVALPVSSLGSSWAALALEKEPTRWDAVVHLGFESSARGLRLETIAANVEASEEYHHMRNSDVPCSKEGTPFRYIQEGASCILPTTAPLSYLTLDDLTMLLESSGYRDVAAQKTWSRDAGTYFCNEQYFRTLYSVRE----AAEPGASLIPVMFVHLPHHDI-MDLDDMAVMVNFIAESLV 1018
            VL+TG+ PF     NPA+ V R L+G C              ++   +PV+  G    A AL ++ + W+AV+H+GFE  A+GL +E  AANV A+E ++++ ++DVPC K  + +R    GA+C++PTTAP+  LTL      L    +R +  ++ WSRDAG+Y+CNE YFRTL++VR     AA   A L+PV+FVH+P     + L + A  +  +AE LV
Sbjct:  241 VLLTGFGPFGAIADNPAELVVRSLDGDCCGSVR---------FESWVIPVNRFGVERVANAL-RDGSAWEAVIHVGFEDEAKGLVIEVAAANVLATE-HNYIWSADVPCDKTNSTWRNAVPGAACLVPTTAPMHKLTLP-----LLRRPHR-LEQEEIWSRDAGSYYCNEVYFRTLHAVRSKQIGAATGRAGLLPVVFVHMPGSGARLSLAEGAEFLRSVAEVLV 448
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BLAST of mRNA_D-dichotoma_M_contig99.20530.1 vs. uniprot
Match: R1C946_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1C946_EMIHU)

HSP 1 Score: 135 bits (339), Expect = 1.140e-32
Identity = 92/251 (36.65%), Postives = 126/251 (50.20%), Query Frame = 2 
Query:  356 TVLVTGYEPFSTFDFNPAQEVARLLNGTCSTVYLTAPFTFVLCYDGVALPVSSLGSSWAALALEKEPTRWDAVVHLGFESSARGLRLETIAANVEASEEYHHMRNSDVPCSKEGT---------------PFRYIQEGASCILPTTAPLSYLTLDDLTMLLESSGYRDVAAQKTWSRDAGTYFCNEQYFRTLYSVR-------------EAAEPGASLIPVMFVHLPHHDIMDLDDMAVMVNFIAESLVLG 1024
            TVLVTGY+P+ +   NPA  VA  LNGT     +          + V+LPVS  G+ WAA  L     R  AV+HLGFES A+GL+LE  A+NV A      + N+  P +  G+               P   I+  A C+L +TAPL  ++L         +  RD    +     AGT+FCNEQYFRTL ++R             +   P  SL+P +FVHLP  D+ +  ++A +V  IAE +VLG
Sbjct:   81 TVLVTGYQPWGSLTHNPAAGVATRLNGTRVGSCVI---------ESVSLPVSREGAEWAARRLASSNGRIAAVIHLGFESRAKGLKLEVAASNVAA------LSNATEPSAGPGSVGDAEGDRHGRCDASPADEIEPSAPCLLASTAPLDLISLPPAV----EAWSRDGTVYEXXXXXAGTFFCNEQYFRTLLAIRSLRLAPPPPRSRHKLPPPEGSLLPTLFVHLPPEDLHEEAEVAKVVQAIAERMVLG 312
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BLAST of mRNA_D-dichotoma_M_contig99.20530.1 vs. uniprot
Match: A0A7S2VZR4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2VZR4_9STRA)

HSP 1 Score: 122 bits (305), Expect = 7.430e-28
Identity = 89/237 (37.55%), Postives = 126/237 (53.16%), Query Frame = 2 
Query:  359 VLVTGYEPFSTFDFNPAQEVARLLNGTCSTVYLT--APFTFVLCYDGVALPVSSLGSSWAALALEKEPTRWDAVVHLGFESSARGLRLETIAANVEASEEYHHMRNSDVPCSKEG-----TPFRYIQEGASCILPTTAPLSYLTLDDLTMLLESSGYRDVAAQKTWSRDAGTYFCNEQYFRTLYSVREAAEPGASLIPVMFVHLPHHDI-MDLDDMAVMVN----FIAESLVLGTIG 1033
            VL+TG++PF  F  NP+   A  LNGT S V+ +  +  T  L  + + + V   G       +   P RWDAVVHLG E++A+GL+LE  AAN+ A+E+              G     +  + I   A  +LPTT  L Y+TL  L     S   R V   + WSRDAG Y+CNE Y+R+L +VR + +  + +IPV+F+HLP  D  + LDDM   V      +AES ++G  G
Sbjct:   80 VLLTGFQPFHAFASNPSGLTAAALNGT-SLVFPSPDSAATVELHVESLLVDVDRRGVEGVEEHIRAFPGRWDAVVHLGLENAAKGLKLEIAAANILATEDNPPWSTGIFSDDGRGAQSSSSSVQRIVPDAPHLLPTTVRLDYVTLRRLQQETASEHLRRVT--ELWSRDAGAYYCNELYYRSLETVRRSRD-SSWVIPVLFIHLPTPDPDLGLDDMRQAVLEVLLTVAESTLVGRGG 312
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BLAST of mRNA_D-dichotoma_M_contig99.20530.1 vs. uniprot
Match: A0A5B8MWB4_9CHLO (Uncharacterized protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MWB4_9CHLO)

HSP 1 Score: 119 bits (297), Expect = 1.880e-27
Identity = 79/203 (38.92%), Postives = 106/203 (52.22%), Query Frame = 2 
Query:  359 VLVTGYEPFS----TFDFNPAQEVARLLNGTCSTVYLTAPFTFVLCYDGVALPVSSLGSSWAA-LALEKEPTRWDAVVHLGFESSARGLRLETIAANVEASEEYHHMRNSDVPCSKEGTPFRYIQEGASCILPTTAPLSYLTLDDLTMLLESSGYRDVAAQKTWSRDAGTYFCNEQYFRTLYSVREAAEPGASLIPVMFVHLP 952
            VLVTG+ PF      +D NP+ EVA LL+G C        F   +C +G+ LPV   G   A    L+  P  W+A++HLG ES+ +GL++E  A N +A +      NS             I +G S ILPTT  L  L   DL   L  SG    + ++ WSRDAG ++CNE ++RTL  VR        L+PV+FVHLP
Sbjct:   36 VLVTGFGPFHHHGHEYDHNPSGEVAELLDGQC--------FQDTICVEGMKLPVDDAGVQVAQNFLLQGNPKAWEAIIHLGLESTTKGLKVEVAALNNKAKD------NST------------IIDGGSTILPTTVDLGAL---DLAPAL--SGVDGSSPEEMWSRDAGHFYCNEIFYRTLRVVRRMYMKDGRLMPVVFVHLP 207
[Close]
BLAST of mRNA_D-dichotoma_M_contig99.20530.1 vs. uniprot
Match: A0A0D2UEL8_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UEL8_CAPO3)

HSP 1 Score: 119 bits (297), Expect = 5.780e-27
Identity = 83/255 (32.55%), Postives = 119/255 (46.67%), Query Frame = 2 
Query:  338 EPLFNFTVLVTGYEPFSTFDFNPAQEVARLLNGTCSTVYL--TAPFTFVLCYDGVALPVSSLGSSWAALALEK--EPTR----WDAVVHLGFESSARGLRLETIAANVEASEEYHHMRNSDVPCSKEGTPFRYIQEGASCILPTTAPLSYLTLDDLTMLLESSGYRDVAAQ----------------KTWSRDAGTYFCNEQYFRTLYSVRE---AAEPGASLIPVMFVHLPHHDIMDLDDMAVMVNFIAESLVL 1021
            +P   F VL+TG+ PF  +  NP+Q VA  L+  C+           + +C+  + LPV+  GS   A  L K  E T     +D ++H+G E +A+GL  ETI  N  A        N+  P          IQ G   +LPTT  L ++ + +L  L E    R +A                  + WSRDAGT++CNE  +RTLY +R       P  +LIP MFVHLP   +M  D  + ++  +A  L L
Sbjct:   37 DPPGAFQVLLTGFGPFMNYTTNPSQLVAEALHDQCAQFRADNVVKHDYAVCFRTMVLPVADNGSVAVASYLSKFTEATADRIPYDVIIHMGLEDAAKGLLFETIGFNQRA--------NASTPGP--------IQPGGPTLLPTTVNLGHVRIPELYSLAERRLGRPLATDAALKVNPTRFSANDTTEAWSRDAGTFYCNETLYRTLYQLRSRNLCRSPAFALIPAMFVHLPELTVMSTDAASSLITELAGKLAL 275
[Close]
BLAST of mRNA_D-dichotoma_M_contig99.20530.1 vs. uniprot
Match: A0A7J6MCV1_PEROL (Uncharacterized protein n=6 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6MCV1_PEROL)

HSP 1 Score: 114 bits (285), Expect = 3.720e-25
Identity = 79/220 (35.91%), Postives = 107/220 (48.64%), Query Frame = 2 
Query:  359 VLVTGYEPFSTFDFNPAQEVARLLNGTCSTVYLTAPFTFVLCYDGVALPVSSLGSSWAALALEKEPTRWDAVVHLGFESSARGLRLETIAANVEASEEYHHMRNSDVPCSKEGTPFRYIQEGASCILPTTAPLSYLTLDDLTMLLESSGYRDVAAQKTWSRDAGTYFCNEQYFRTLYSVREAAEPGASLIPVMFVHLPHHDIMDLDDMAVMVNFIAESLV 1018
            V VTGY+PF  F FNP+  VAR LNG+C+  Y    F   + + G + P     +SW       +P    A+VHLG E  A+GL+LE  A NV A        NS +P    GT           ILP+TA L  + + D              A + WS DAG+Y+CNE YFRTL  +R     G + IP +FVHLP   +M ++    +V  +   L+
Sbjct:  116 VWVTGYQPFKDFTFNPSAAVARTLNGSCTHDYCVQAFELPVTHAGASQP-----ASWLREPAVPKPA---AIVHLGLEDRAKGLKLEVAAKNVLAES------NSSLPILANGTS----------ILPSTANLGLIDVVD--------------ADEMWSVDAGSYYCNEIYFRTLSEIRTR---GLN-IPAIFVHLPEPRVMSVEQDGRLVRRLISQLL 293
[Close]
BLAST of mRNA_D-dichotoma_M_contig99.20530.1 vs. uniprot
Match: A0A7S3JRC4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JRC4_9STRA)

HSP 1 Score: 114 bits (285), Expect = 8.910e-25
Identity = 96/298 (32.21%), Postives = 128/298 (42.95%), Query Frame = 2 
Query:  359 VLVTGYEPFSTFDFNPAQEVARLLNGTCSTVYLTAPFTFVLCYDGVALPVSSLGSSWAALALEKEPTRWDAVVHLGFESSARGLRLETIAANVEASEEYHHMRNSDVPCSKEGTPFRYIQEGASCILPTTAPLSYLTLDDLTMLLESSGYRDVAAQKTWSRDAGTYFCNEQYFRTLYSVRE----AAEPGAS---------------------------LIPVMFVHLPHHDIMDLDDMAVMVNFIAESLVLGTIGLLFDP--RTA*SPSAWQWF*----RYHPAASHSEHAEVRPAD 1141
            VLVTG+E F+    NP+   A  LNGTC   Y         C +   L V S G+ W A  L K    + AV+HLGFE  A+GL++E +A N+  S   +     D PC+KE        E   C+  TTAPL  L L                  + WSRDAG ++CNE YFR+L++VR        P +S                           LIPV+FVHLP  +IMD        N +   L+   I +L DP   T   P + Q F      +H    + +  EV+  D
Sbjct:   85 VLVTGFERFNNILVNPSLVAAMSLNGTCGPHY---------CIESHILSVDSNGAKWPASRLHK----YIAVLHLGFEDVAKGLKIEIMAKNLLGSTS-NPSWGFDDPCTKESAAI----ENGPCLQVTTAPLDRLILPSTN-----------ETNEVWSRDAGAFYCNELYFRSLHTVRSRQLLVPSPSSSCLLLSQQLLDNDSLTRASDHHLHFAQALIPVLFVHLPDTNIMD--------NDLVLPLLHRLIYILADPPLTTVHPPPSTQTFKDIHYSFHDQGDNDDIGEVQDLD 345
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig99.20530.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KEJ8_9PHAE4.240e-8659.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LM47_ECTSI2.590e-5263.24Pyrrolidone-carboxylate peptidase, putative (Parti... [more]
A0A7S4VFG5_9DINO3.550e-4242.15Hypothetical protein n=2 Tax=Alexandrium monilatum... [more]
A0A7S4BFQ2_CHRCT1.200e-3439.56Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
R1C946_EMIHU1.140e-3236.65Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A7S2VZR4_9STRA7.430e-2837.55Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A5B8MWB4_9CHLO1.880e-2738.92Uncharacterized protein n=1 Tax=Chloropicon primus... [more]
A0A0D2UEL8_CAPO35.780e-2732.55Uncharacterized protein n=1 Tax=Capsaspora owczarz... [more]
A0A7J6MCV1_PEROL3.720e-2535.91Uncharacterized protein n=6 Tax=Perkinsus olseni T... [more]
A0A7S3JRC4_9STRA8.910e-2532.21Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig99contigD-dichotoma_M_contig99:605153..609507 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score183.0
Seed ortholog evalue2.2e-43
Seed eggNOG ortholog2880.D8LM47
EggNOG OGs2E8W4@1,2SFAX@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionPeptidase C15, pyroglutamyl peptidase I-like
Ec32 orthologEc-06_002440.1
Exons5
Model size1281
Cds size936
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931261.8047931-UTR-D-dichotoma_M_contig99:605152..6053731622931261.8047931-UTR-D-dichotoma_M_contig99:605152..605373Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig99 605153..605373 -
1690799692.2032964-UTR-D-dichotoma_M_contig99:605152..6053731690799692.2032964-UTR-D-dichotoma_M_contig99:605152..605373Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig99 605153..605373 -
1622931261.924312-UTR-D-dichotoma_M_contig99:609383..6095071622931261.924312-UTR-D-dichotoma_M_contig99:609383..609507Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig99 609384..609507 -
1690799692.2824843-UTR-D-dichotoma_M_contig99:609383..6095071690799692.2824843-UTR-D-dichotoma_M_contig99:609383..609507Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig99 609384..609507 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931261.822758-CDS-D-dichotoma_M_contig99:605373..6055021622931261.822758-CDS-D-dichotoma_M_contig99:605373..605502Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig99 605374..605502 -
1690799692.2145898-CDS-D-dichotoma_M_contig99:605373..6055021690799692.2145898-CDS-D-dichotoma_M_contig99:605373..605502Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig99 605374..605502 -
1622931261.8441722-CDS-D-dichotoma_M_contig99:607336..6075461622931261.8441722-CDS-D-dichotoma_M_contig99:607336..607546Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig99 607337..607546 -
1690799692.233567-CDS-D-dichotoma_M_contig99:607336..6075461690799692.233567-CDS-D-dichotoma_M_contig99:607336..607546Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig99 607337..607546 -
1622931261.8831708-CDS-D-dichotoma_M_contig99:607834..6079721622931261.8831708-CDS-D-dichotoma_M_contig99:607834..607972Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig99 607835..607972 -
1690799692.2467182-CDS-D-dichotoma_M_contig99:607834..6079721690799692.2467182-CDS-D-dichotoma_M_contig99:607834..607972Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig99 607835..607972 -
1622931261.8971057-CDS-D-dichotoma_M_contig99:608294..6085061622931261.8971057-CDS-D-dichotoma_M_contig99:608294..608506Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig99 608295..608506 -
1690799692.264508-CDS-D-dichotoma_M_contig99:608294..6085061690799692.264508-CDS-D-dichotoma_M_contig99:608294..608506Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig99 608295..608506 -
1622931261.9106448-CDS-D-dichotoma_M_contig99:609136..6093831622931261.9106448-CDS-D-dichotoma_M_contig99:609136..609383Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig99 609137..609383 -
1690799692.2734554-CDS-D-dichotoma_M_contig99:609136..6093831690799692.2734554-CDS-D-dichotoma_M_contig99:609136..609383Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig99 609137..609383 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig99.20530.1prot_D-dichotoma_M_contig99.20530.1Dictyota dichotoma ODC1387m malepolypeptideD-dichotoma_M_contig99 605374..609383 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dichotoma_M_contig99.20530.1

>prot_D-dichotoma_M_contig99.20530.1 ID=prot_D-dichotoma_M_contig99.20530.1|Name=mRNA_D-dichotoma_M_contig99.20530.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=312bp
MMGSMMRRSFAMSLIAAGVARRVPQGSRADIILNATRDKQTEPCPRGYGG
GKIDLRGGFGEKQAGKLYNTEEPLFNFTVLVTGYEPFSTFDFNPAQEVAR
LLNGTCSTVYLTAPFTFVLCYDGVALPVSSLGSSWAALALEKEPTRWDAV
VHLGFESSARGLRLETIAANVEASEEYHHMRNSDVPCSKEGTPFRYIQEG
ASCILPTTAPLSYLTLDDLTMLLESSGYRDVAAQKTWSRDAGTYFCNEQY
FRTLYSVREAAEPGASLIPVMFVHLPHHDIMDLDDMAVMVNFIAESLVLG
TIGLLFDPRTA*
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mRNA from alignment at D-dichotoma_M_contig99:605153..609507-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dichotoma_M_contig99.20530.1 ID=mRNA_D-dichotoma_M_contig99.20530.1|Name=mRNA_D-dichotoma_M_contig99.20530.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=4355bp|location=Sequence derived from alignment at D-dichotoma_M_contig99:605153..609507- (Dictyota dichotoma ODC1387m male)
CCGAACCATCGATCTTACTTGGATCTCTTCCAAGTGGGCGGAACAGGCTT
CATATTTCTAGAGAAGCACTAGGAGGAAGGACGCCACCCTCCAGAGCTGA
ATTACTTGGAAACTTGATCGAGACATGATGGGGTCCATGATGCGACGCTC
TTTCGCGATGTCCCTTATTGCCGCGGGAGTAGCGCGACGCGTACCGCAGG
GATCGAGGGCAGATATCATCCTAAACGCAACGAGGGACAAGCAAACGGAG
CCATGTCCCAGAGGATATGGCGGGGGGAAAATTGATCTTAGAGGTGGATT
CGGGGAGAAGCAGGCTGGGAAGCTTTACAACACCGAGGAACCCTTGTTCA
ATTTCACAGTGCTGGTGACAGGTACGAGCTACTGGATGATCGAAAATACT
GCGGGGATGAAACCTTGAAGAAGCCGGTCCGCGAATCATGTGCTCTCATG
TGGAGTTCGTCGACCTCCATTCAAGAAAGATACACGGCAGGCGATCTCCA
TCAGGGCAGGGAAAAATGATTCATGAAGCTCACGGTTCAAAGGAGAGTTG
GGGATCACTATTCTGATACAGTAACATGAACACAGCTAGTGTCTTGCGTT
CCAGAAGCAATAATATGGACGTCGAGCTAATGTGGTCATCATCAGTTTGA
AGGATGGGGCATCATCGGTTTGAAGGATCGGGGTTCATGCAAATCTTGAA
AATCGAAAACAGACAACGATACGGGATCTCCATCAGGGGATAAATGGCAT
TCCGTGAAGTGCTTCGCAGGGTGATCGGAGTTGGAGCTCCTCGAGATTCC
TTTCTTTGCAACCCGTTACCCTTGGTCAGAGAGAGATGAATTATGACTGC
TGTATCCATTCCGCCTTGTAGACTGCAATGCATGATGTTGCGAGAGTCCT
CCTCCTTGACGAGCCAAGTCCGTCGTCTAACGCATCATTCTACCCAATCG
TTCCGCCGTCCTCCCCGTGTTCTCGACTCACTCTCGCTCTCACTCTCAAA
GGATATGAACCTTTCTCAACCTTCGACTTCAACCCGGCCCAGGAAGTTGC
TAGGCTCCTCAATGGAACATGTAGCACCGTTTACCTCACGGCGCCGTTCA
CATTCGTCCTCTGCTACGATGGTGTGGCCTTGCCAGTCTCAAGTCTCGGG
AGCAGCTGGGCTGCGCTGGCACTGGAGAAGGAACCCACAAGATGGGACGC
CGTAGTGCACCTGGTGTGACCATGCACCAAGATGCGCCTCGGGGGGTATA
TCTGTCTCTCCTCCCTGAACTCGTAGATTCAAAGCACGCCGCCCGTAATA
CATTTCCGTTCGAGCTTTGCTGATCTACATCCCATGTTTGGATCATCGGT
AATTAATCACCTACCCTGTTGGACGTTTTCATGAGCTAGGTTCATCAACA
ACCCTGGGGGGCAATTATCTACTGTACTTCAACACGCACCACTGGACTTT
AATTGGCATGCAGCAGGGAGGTTCAAAAAGGTTCAATCCATTTTTGAGCA
CTTCCTGTCCGATCAATACGGTTCGCCTGTGTCAGGGTTTCGAGTCATCG
GCAAGAGGTCTACGTCTGGAGACTATAGCAGCCAACGTTGAAGCTAGTGA
AGAGTATCATCACATGAGAAACTCGGACGTGCCATGCAGCAAAGAAGGGA
CACCCTTCCGATATATCCAGGAGGCGAGCTACGTTCTGCATGAGGAAAGA
ACTTAACTCGGGCACGTAGACGCTGTTGCTGAACATGAAGCCTGATTCGT
AACGGGGGTATCTTTGCCTGTGCTGCATATTGCTTGGCACCGGTAACAGC
AGTCAATTCGTGTGCTGGTGTGGTGGGGCGTTCAACGACAGTTTCATGTT
CAGAGTCTATACTACTGCAGTGAGCATGTCGTGATTCCCGCCTGACATGC
GCATGCACACGAGAATTTTGTTTCGTGGCGCTGATAACATTTCTCCCTTT
CTCCCGTTCAGGGGGCGTCCTGTATCCTGCCAACGACCGCACCTCTATCC
TATCTGACCCTGGACGACCTGACGATGCTTTTGGAGAGTAGCGGGTACAG
AGACGTTGCCGCCCAAAAAACCTGGAGTCGGGATGCTGGAACATACTTTT
GCAACGAACAGTACTTCCGTACCCTGTACAGCGTCCGCGAAGCTGCTGAG
CCGGGGGCATCCTTGATTCCGGTGAGAGCGTCGAGGGAGTTATTGCGAAA
GGCCTTGTGAAGGACGTGGTACTCCAGCACTACAGCCAATGGGATGGATG
GATGGTAGTGCGTGAGACTTTCCCCAGGACATGAAACTGTATGCTTGAGA
TGGAGAAAACCAGTTTGTATAATGCAACATCGTTATATCAATATATTAGA
CTGGTGACGGATGAGACAAGAGACGAACCCAGGTTCCGTCGATGCTCTCT
CGGTCTTCTCCCCTGAAGTTCTGTAGCGAAGCAGGTTCCTTAGACAAGGC
GTTTTCTTTCTTCCGTATTGAGCTAGCTGTGTGGAGGCACACCGAGGTGG
TACAGTGCGGTAACAGCAGTACACCCCTCGGAGGCTCACGGTAGCAATGC
GTAGAACTCACGGTCAGACTGACGTTTGGGCCTCGAGAAGAGTGAGTGCA
CTTATCGATCCTGAGATCTGTACCTCCGGAACCCATATTCTTGGGGGGGG
GTTCCCGAGGAGGCTACCCCTATACGGGTGCCCAACGGTACTCGGTATTC
ACGATTAGACTATGCTAATACCTCCCTGTCTGCCCTATGTGCTGCGTGAG
TCCCAAGATAAAGACTAGTATTTCTCCGGATCCAGTACTCCGGTAGGCAT
ATTCCTTGTTAAGATTAAGGAAAGGATAGTATAACAGTGTTCTCGTAGAG
GAGGCTCGAAAGTGAATGGATACTTTTAAGAGCCTCAGCTCAGAGTAGCC
AAGAAAAGAAAGAGGGCGAAAGACCGATCGAACATTATCGATGGAGGCGT
TTCGGTCCTCGAGTATATGATATCAACGTTCTGGTCTCTGCGATGGAAGG
CGTTCTTAGGACCATCGTCGGCCTTGCTTCATTGGCCCTGAGTGGCCGTA
GAGGTTTATCCTACCGACCTCATCGGGGTGTTCTGAGATCCTTGACCATC
GCATGGTCAGTCGCTCGTGATAGGGTTGTCTCGAACGCTCTAGTCACATC
CTGTCCACATACCGCACCCTAGCAGATGGTTGGTTATTCACCGAGCTCGG
TTCGCACACGATCGACTCTGCTGAGTGTTATGACTTTGCACTCCCTACTG
ACAAGCCAATATAGCTTTTCCTACGCGAGGTGTATTATCACGAGGTTAAG
TACAGTAGTCAAGGGGCTGCAGAGCAAGCTCCCCATCTCAGGCATCCACA
AATATCGTTATTGCCGAGGTCTTGCAGCAGGAGGATAGCAACCTAAAGTA
GCTCCCCTGGGAACTTGGCCTCGCTTCGTAGTCACGTTCTGTGCATGTCG
ACCATGGTAGCTCACGGTTGCGTCGCCCTGAGTTGACCTTTGCTGCGTTC
AGCTGTTTGCAACTGGTGGACTGCAACACCATATGTCGGTCGAGGATACT
ATGACAATCGTCGATGGGATCGGTGCTTGGATCTAGATGGCGCGCTGGTC
TGGAAGACGGGTCGCGCCTTCTTCGTACAGATGGGATCTTATTCCTGTTC
TTCGGTGCATGGAATACCGTCATAGCCCATACTCCACAGGCGAAGTCAGA
TCATGGAGACATGTTTTGATCGAGACGAAGGGTGGGGCGCGACGATGCCG
CAAGCATCTGATGGGCCATCACCCGAGAAACAGGCCCTGCCCGCCGTGGG
ACTGACTGACTGACTGAGCACGAGACAGTTTTAATCTGCTCTGCACGTAT
GCATCACTTCCATTGGCAGCGGGTGACATCACGAGCCAGGTGGTGCATGC
TGCTGTGAGCGAAATGTTGAGAGTGTTTAGAATGTTGAGCCTTCGAGGAT
GCCAATGAGACAAGCAACTATCCTTGTGCATGCTACCGCTGCTTCTCGCC
CTCAGGTGATGTTCGTCCATCTCCCCCACCATGACATCATGGACTTGGAT
GACATGGCAGTGATGGTGAACTTCATCGCGGAGAGCCTCGTCCTCGGCAC
TATCGGCCTTCTTTTCGATCCGCGAACCGCATAATCACCCAGCGCCTGGC
AGTGGTTCTAACGCTACCACCCTGCAGCCAGCCACAGCGAACACGCTGAG
GTTAGGCCTGCTGACATCGCAATTTCTTCTGTGAGCTCCCCAAGAGGAAG
TAGTCAAGTAGAAGGCGACTCTGGTCTGTATCATACTGTACATGACCTGG
GGTAGCACGGCATCGTACGACGGGCTAGTTCTTCACGTGGGTTGCAGCAC
CGAGG
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Coding sequence (CDS) from alignment at D-dichotoma_M_contig99:605153..609507-

>mRNA_D-dichotoma_M_contig99.20530.1 ID=mRNA_D-dichotoma_M_contig99.20530.1|Name=mRNA_D-dichotoma_M_contig99.20530.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=1872bp|location=Sequence derived from alignment at D-dichotoma_M_contig99:605153..609507- (Dictyota dichotoma ODC1387m male)
ATGATGGGGTCCATGATGCGACGCTCTTTCGCGATGTCCCTTATTGCCGC
GGGAGTAGCGCGACGCGTACCGCAGGGATCGAGGGCAGATATCATCCTAA
ACGCAACGAGGGACAAGCAAACGGAGCCATGTCCCAGAGGATATGGCGGG
GGGAAAATTGATCTTAGAGGTGGATTCGGGGAGAAGCAGGCTGGGAAGCT
TTACAACACCGAGGAACCCTTGTTCAATTTCACAGTGCTGGTGACAGATG
ATGGGGTCCATGATGCGACGCTCTTTCGCGATGTCCCTTATTGCCGCGGG
AGTAGCGCGACGCGTACCGCAGGGATCGAGGGCAGATATCATCCTAAACG
CAACGAGGGACAAGCAAACGGAGCCATGTCCCAGAGGATATGGCGGGGGG
AAAATTGATCTTAGAGGTGGATTCGGGGAGAAGCAGGCTGGGAAGCTTTA
CAACACCGAGGAACCCTTGTTCAATTTCACAGTGCTGGTGACAGGATATG
AACCTTTCTCAACCTTCGACTTCAACCCGGCCCAGGAAGTTGCTAGGCTC
CTCAATGGAACATGTAGCACCGTTTACCTCACGGCGCCGTTCACATTCGT
CCTCTGCTACGATGGTGTGGCCTTGCCAGTCTCAAGTCTCGGGAGCAGCT
GGGCTGCGCTGGCACTGGAGAAGGAACCCACAAGATGGGACGCCGTAGTG
CACCTGGATATGAACCTTTCTCAACCTTCGACTTCAACCCGGCCCAGGAA
GTTGCTAGGCTCCTCAATGGAACATGTAGCACCGTTTACCTCACGGCGCC
GTTCACATTCGTCCTCTGCTACGATGGTGTGGCCTTGCCAGTCTCAAGTC
TCGGGAGCAGCTGGGCTGCGCTGGCACTGGAGAAGGAACCCACAAGATGG
GACGCCGTAGTGCACCTGGGTTTCGAGTCATCGGCAAGAGGTCTACGTCT
GGAGACTATAGCAGCCAACGTTGAAGCTAGTGAAGAGTATCATCACATGA
GAAACTCGGACGTGCCATGCAGCAAAGAAGGGACACCCTTCCGATATATC
CAGGAGGGTTTCGAGTCATCGGCAAGAGGTCTACGTCTGGAGACTATAGC
AGCCAACGTTGAAGCTAGTGAAGAGTATCATCACATGAGAAACTCGGACG
TGCCATGCAGCAAAGAAGGGACACCCTTCCGATATATCCAGGAGGGGGCG
TCCTGTATCCTGCCAACGACCGCACCTCTATCCTATCTGACCCTGGACGA
CCTGACGATGCTTTTGGAGAGTAGCGGGTACAGAGACGTTGCCGCCCAAA
AAACCTGGAGTCGGGATGCTGGAACATACTTTTGCAACGAACAGTACTTC
CGTACCCTGTACAGCGTCCGCGAAGCTGCTGAGCCGGGGGCATCCTTGAT
TCCGGGGGCGTCCTGTATCCTGCCAACGACCGCACCTCTATCCTATCTGA
CCCTGGACGACCTGACGATGCTTTTGGAGAGTAGCGGGTACAGAGACGTT
GCCGCCCAAAAAACCTGGAGTCGGGATGCTGGAACATACTTTTGCAACGA
ACAGTACTTCCGTACCCTGTACAGCGTCCGCGAAGCTGCTGAGCCGGGGG
CATCCTTGATTCCGGTGATGTTCGTCCATCTCCCCCACCATGACATCATG
GACTTGGATGACATGGCAGTGATGGTGAACTTCATCGCGGAGAGCCTCGT
CCTCGGCACTATCGGCCTTCTTTTCGATCCGCGAACCGCATAAGTGATGT
TCGTCCATCTCCCCCACCATGACATCATGGACTTGGATGACATGGCAGTG
ATGGTGAACTTCATCGCGGAGAGCCTCGTCCTCGGCACTATCGGCCTTCT
TTTCGATCCGCGAACCGCATAA
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