mRNA_D-dichotoma_M_contig95.20213.1 (mRNA) Dictyota dichotoma ODC1387m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dichotoma_M_contig95.20213.1
Unique NamemRNA_D-dichotoma_M_contig95.20213.1
TypemRNA
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Homology
BLAST of mRNA_D-dichotoma_M_contig95.20213.1 vs. uniprot
Match: A0A8B6C2M9_MYTGA (Uncharacterized protein n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6C2M9_MYTGA)

HSP 1 Score: 105 bits (261), Expect = 9.640e-21
Identity = 75/249 (30.12%), Postives = 120/249 (48.19%), Query Frame = 2
Query: 2591 TGMPGFE--CWREFYNILNINGNADNLLYYSDPEAAGGTEWSIQRRRW---KHKLETERCLLFTLFTLRTGSPVAVASVLLGVSSPVGTRCSTTWVNFLWRSSKVFVRLPSPQEVVENAPDSFVRCGLQKVVLVLDGTEIETERHWHTDLAHVLWSPYKQRPTAKLLVGITAWGSICFVSKAFGGHLSDVEIVRRSGLVEKLEKLGFCGKGYSILVDRGLYHLG*DLVLKGMTLVEPPTLARAKPNYRK 3322
            TG+  +   CW     +  ++  A N+ YY   +    T +     +    K KL  E  LL TL  LR        + L  VSS + +   TTW++ L    +  +  P+  ++ +  PD + + G  KV  ++D TE++TER         L+S YK R T K+LV  T  G++ FVS A GG +SDVE+VRR G+++  E+      G  ++ D+G  +   D +L  + L+ P   AR    +R+
Sbjct:   12 TGLASYSLFCWL----LDEVSVPASNMKYYKGEDFCETTSYQENNAKKPGPKRKLSLEDELLMTLMKLRLNLNQEFMASLFNVSSSLVSSIITTWISLLALELRPLIHWPTRDQLDQYYPDCYSKYG--KVTAIIDCTEVQTERPSLDSTNSALYSNYKSRHTYKVLVACTPGGTVSFVSHATGGDMSDVELVRRCGILDLFEE------GDKVMADKGFNNKD-DFLLGDVELIIP-AFARKNIQFRE 246          
BLAST of mRNA_D-dichotoma_M_contig95.20213.1 vs. uniprot
Match: A0A8B6HG43_MYTGA (THAP-type domain-containing protein n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6HG43_MYTGA)

HSP 1 Score: 105 bits (262), Expect = 4.030e-20
Identity = 75/249 (30.12%), Postives = 121/249 (48.59%), Query Frame = 2
Query: 2591 TGMPGFE--CWREFYNILNINGNADNLLYYSDPEAAGGTEWSIQRRRW---KHKLETERCLLFTLFTLRTGSPVAVASVLLGVSSPVGTRCSTTWVNFLWRSSKVFVRLPSPQEVVENAPDSFVRCGLQKVVLVLDGTEIETERHWHTDLAHVLWSPYKQRPTAKLLVGITAWGSICFVSKAFGGHLSDVEIVRRSGLVEKLEKLGFCGKGYSILVDRGLYHLG*DLVLKGMTLVEPPTLARAKPNYRK 3322
            TG+  +   CW     +  ++  A N+ YY   ++   T +     +    K KL  E  LL TL  LR        + L  VSS + +   TTW++ L    +  +  P+  ++ +  PD + + G  KV  ++D TE++TER         L+S YK R T K+LV  T  G++ FVS A GG +SDVE+VRR G+++  E+      G  ++ D+G  +   D +L  + L+ P   AR    +R+
Sbjct:  125 TGLASYSLFCWL----LDEVSVPASNMKYYKGEDSHETTSYQENNAKKPGPKRKLSLEDELLMTLMKLRLNLNQEFMASLFNVSSSLVSSIITTWISLLALELRPLIHWPTRDQLDQYYPDCYSKYG--KVTAIIDCTEVQTERPSLDSTNSALYSNYKSRHTYKVLVACTPGGTVSFVSHATGGDMSDVELVRRCGILDLFEE------GDKVMADKGFNNKD-DFLLGDVELIIP-AFARKNIQFRE 359          
BLAST of mRNA_D-dichotoma_M_contig95.20213.1 vs. uniprot
Match: A0A7D9EAL5_PARCT (THAP domain-containing 6 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9EAL5_PARCT)

HSP 1 Score: 102 bits (253), Expect = 1.370e-18
Identity = 86/303 (28.38%), Postives = 137/303 (45.21%), Query Frame = 2
Query: 2591 TGMPGFECWREFYNILNINGNADNLLYY-SDPEAAGGTEWSIQRRRWKHK-LETERCLLFTLFTLRTGSPVAVASVLLGVSSPVGTRCSTTWVNFLWRSSKVFVRLPSPQEVVENAPDSFVRCGLQKVVLVLDGTEIETERHWHTDLAHVLWSPYKQRPTAKLLVGITAWGSICFVSKAFGGHLSDVEIVRRSGLVEKLEKLGFCGKGYSILVDRGLYHLG*DLVLKGMTLVEPPTLARAKPNYRKRI*MCHTVW----RASASM*SVP*ER*NSGVL*QAKFLLDN--WTSLAWLCMLSPPL 3475
            TG P  + +   Y   N   + +N+ Y+ S   + G T      ++ + + L  +  L  TL  LR G P    + L GVS    +R   TWVNFL+   K     PS + V +  P+ F         +++D TEI+ +      L   L+S YK   T K LVGIT  G++ FVS+ + GH+SD EIV RSG +++         G S++ D+G + +  DL+  G+ L  PP L        + +    ++         ++  +   +   G++    F + N  WT  A LC L  P+
Sbjct:  235 TGFPDVKLFDALYEFCNPGEHGENISYWHSATTSEGSTSSDFSTKQGRPRILHPKEELFITLCRLRQGFPEEHLAHLYGVSQSTISRIIVTWVNFLYLKLKDVPMWPSRELVDKYMPEQFKE-KFPSTRVIIDCTEIKCQMPSSLLLNSELFSSYKNNATLKCLVGITPGGAMSFVSQLYTGHISDREIVMRSGFLDQQ-----FNNGDSVMADKG-FTID-DLLPPGVGLNIPPFLGMQGQMSAEDVVKTQSIASLRVHVERAINKIKNFKIWDGIVPLNLFGVVNQMWTVCAVLCNLQKPI 529          
BLAST of mRNA_D-dichotoma_M_contig95.20213.1 vs. uniprot
Match: UPI001CF1BC13 (uncharacterized protein LOC114976189 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF1BC13)

HSP 1 Score: 95.9 bits (237), Expect = 4.300e-18
Identity = 67/194 (34.54%), Postives = 96/194 (49.48%), Query Frame = 2
Query: 2717 RRRWKHKLETERCLLFTLFTLRTGSPVAVASVLLGVSSPVGTRCSTTWVNFLWRSSKVFVRLPSPQEVVENAPDSFVRCGLQKVVLVLDGTEIETERHWHTDLAHVLWSPYKQRPTAKLLVGITAWGSICFVSKAFGGHLSDVEIVRRSGLVEKLEKLGFCGKGYSILVDRGLYHLG*DLVLKGMTLVEPPTLA 3298
            +R    KL +       L  L+ G  +   S   G+S    +R   TWVNFL+   K     PS   V +N P  F +    +++L  D TE+  ER          WS YK   T KLLVG+T  G + F+SK +GG +SD  I R SG++  LE       G +++VDRG + +  D+V +G+T+  PP LA
Sbjct:    2 KRGPSRKLNSIDEFFLVLMRLKAGLFLQDLSDRFGISITTVSRICITWVNFLYYELKDMFPFPSQNLVRKNMPQEFAQFPTTRIIL--DCTELFIERPSAMLAQSETWSEYKHHNTWKLLVGVTPNGQVTFLSKLWGGRVSDKHITRESGVLNLLEA------GDNVMVDRG-FDIS-DIVAEGVTVNMPPFLA 185          
BLAST of mRNA_D-dichotoma_M_contig95.20213.1 vs. uniprot
Match: A0A1E1XPL8_9ACAR (Putative isl2eu-1 adi (Fragment) n=2 Tax=Amblyomma sculptum TaxID=1581419 RepID=A0A1E1XPL8_9ACAR)

HSP 1 Score: 97.1 bits (240), Expect = 4.440e-18
Identity = 69/238 (28.99%), Postives = 112/238 (47.06%), Query Frame = 2
Query: 2576 EVSSLTGMPGFECWREFYNILNINGNADNLLYYSDPEAAGGTEWSIQRRRWKHKLETERCLLFTLFTLRTGSPVAVASVLLGVSSPVGTRCSTTWVNFLWRSSKVFVRLPSPQEVVENAPDSFVRCGLQKVVLVLDGTEIETERHWHTDLAHVLWSPYKQRPTAKLLVGITAWGSICFVSKAFGGHLSDVEIVRRSGLVEKLEKLGFCGKGYSILVDRGLYHLG*DLVLKGMTLVEPP 3289
            E    TG+P +E ++  Y  LN           + P+++ G             L +       L  L TG PV   +   G++    ++  + WV F+ ++ +   R+PS  EV +N P  F+    +   +V+DGTEI  +     D     +SPYK   T K+LVG T  G +CFVS A+GG +SD ++V +S L++  +       G +I++D+G      DL+  G+T   PP
Sbjct:   22 ECKYYTGLPSYEVFKGLYTALNS----------AMPQSSKGPS---------RALGSIDDFFMVLVRLLTGMPVKELARNFGMTQSYVSKTFSKWVLFMHKALRAITRVPSLAEVQQNLPKQFLN--FRDTRMVIDGTEIRLQTPSSVDAQRQTFSPYKHGNTVKVLVGATPDGYVCFVSDAWGGSISDRDLVLKSKLLDIFKP------GDAIMMDKGFKIF--DLLPPGVTAHMPP 230          
BLAST of mRNA_D-dichotoma_M_contig95.20213.1 vs. uniprot
Match: UPI001C0590C4 (uncharacterized protein LOC121639649 n=1 Tax=Melanotaenia boesemani TaxID=1250792 RepID=UPI001C0590C4)

HSP 1 Score: 95.9 bits (237), Expect = 2.290e-17
Identity = 78/247 (31.58%), Postives = 121/247 (48.99%), Query Frame = 2
Query: 2615 WREFYNILNING-NADNLLYYSDPEAAGGTEWSIQRRRW-KHKLETERCLLFTLFTLRTGSPVAVASVLLGVSSPVGTRCSTTWVNFLWRSSKVFVR--LPSPQEVVENAPDSFVRCGLQKVVLVLDGTEIETERHWHTDLAHVLWSPYKQRPTAKLLVGITAWGSICFVSKAFGGHLSDVEIVRRSGLVEKLEK--LGFCGKGYSI---LVDRGLYHLG*DLVLKGMTLVEPPTLARAKPNYRKRI 3328
            W +F  + N  G + D L Y+   ++   +E S  +R   K KL+T   L  TL  LRTG      +   GVS  + ++  TTW+ F++       +    S + V  N P  F R   + +  ++D TE   E+  + +    L+S YK   T K+LVG++  G++ FVS A+ G +SDVEIV++SG ++ LE   L    +G++I   L +RG+ HL     L G   + P      K   R RI
Sbjct:   64 WLQFMALWNFLGPSTDKLTYH---KSTLRSEISPSKRPGVKRKLDTINELFLTLIRLRTGLLHQDLAFRFGVSVSLVSKIVTTWIQFMYLEFSTLRKQMFASREIVARNLPSCFKR--FKGIRTIIDCTEFFVEQASNFEQQGNLYSSYKSHGTYKVLVGVSPTGAVMFVSDAYEGSISDVEIVKQSGFLDNLEAGDLVLADRGFTIREILAERGV-HLNIPPFLSGRKRLTPEEEIYTKKIARVRI 304          
BLAST of mRNA_D-dichotoma_M_contig95.20213.1 vs. uniprot
Match: A0A6B0VAI1_IXORI (Putative dde superfamily endonuclease n=2 Tax=Ixodes ricinus TaxID=34613 RepID=A0A6B0VAI1_IXORI)

HSP 1 Score: 96.3 bits (238), Expect = 4.070e-17
Identity = 72/230 (31.30%), Postives = 104/230 (45.22%), Query Frame = 2
Query: 2624 FYNILNINGNADNLLYYSDPEAAGGTEWSIQR--------RRWKHKLETERCLLFTLFTLRTGSPVAVASVLLGVSSPVGTRCSTTWVNFLWRSSKVFVRLPSPQEVVENAPDSFVRCGLQKVVLVLDGTEIETERHWHTDLAHVLWSPYKQRPTAKLLVGITAWGSICFVSKAFGGHLSDVEIVRRSGLVEKLEKLGFCGKGYSILVDRGLYHLG*DLVLKGMTLVEPP 3289
            FY  L  +   D LL Y  P A+G   W   +        R  +H+L  E      L  LR G      +    +S    +R    W+NFL R  ++   LPS + +  + P SF   G +   LVLD TE+  +R          +SPYK   T K L+G T  G + FVS+ +GG +SD  I+  SGL++ LE+      G  I+VD+G        +  G+T+  PP
Sbjct:  130 FYTGLVNSAVFDCLLEYFTPRASGMCYWGSDKKNRSETRGRPREHELGDE--FFMVLVRLRRGMSGEELARNFMMSESQVSRIFAAWINFLQRELRMLTTLPSREAIKPHLPKSFR--GFENTRLVLDATEVRIQRPSSLSAQRQTFSPYKHYNTYKALIGCTPDGYVAFVSRLWGGSVSDKTILEGSGLLDVLEE------GDGIMVDKGFTF---PYLPSGLTVYRPP 346          
BLAST of mRNA_D-dichotoma_M_contig95.20213.1 vs. uniprot
Match: UPI0018999409 (uncharacterized protein LOC119437367 n=2 Tax=Dermacentor silvarum TaxID=543639 RepID=UPI0018999409)

HSP 1 Score: 94.7 bits (234), Expect = 4.670e-17
Identity = 77/253 (30.43%), Postives = 118/253 (46.64%), Query Frame = 2
Query: 2591 TGMPGFECWREFYNILNINGNADNLLYYSDPEAAGGTEWSIQRR-----RWKHKLETERCL--LFTLFTLRTGSPVAVASVLLGVSSPVGTRCSTTWVNFLWRSSKVFVRLPSPQEVVENAPDSFVRCGLQKVVLVLDGTEIETERHWHTDLAHVLWSPYKQRPTAKLLVGITAWGSICFVSKAFGGHLSDVEIVRRSGLVEKLEKLGFCGKGYSILVDRGLYHLG*DLVLKGMTLVE-PPTLARAKPNYRKR 3325
            TG+P +E +              +LL Y  P A   + W+ +++     R + K ETE  +  L  L  LRTG      +    +S    +R  TTW+NFL R  +    +PS ++++ + P SF     +   L+LD TE+  +R          +S YK   T K+L+G T  G I FVS+ +GG +SD  I++ SGL++ LE       G +I+VD            KG T    PP L   +P +R+R
Sbjct:   50 TGLPRYEVFH-------------SLLQYLTPRADEMSYWNWEKKSQNETRGRPK-ETELAMEFLMVLVRLRTGMRGKELARNFSISESQVSRIFTTWINFLERELRHLNHIPSQEQILPHLPKSFRH--FENTRLILDATEVRIQRPSSQSAQRQTFSSYKHYNTYKVLIGCTPDGYIAFVSRLWGGSVSDKNILQCSGLLDDLEP------GDAIMVD------------KGFTFPYLPPELTVYRPPFRER 268          
BLAST of mRNA_D-dichotoma_M_contig95.20213.1 vs. uniprot
Match: UPI00189321FD (uncharacterized protein LOC119400736 n=1 Tax=Rhipicephalus sanguineus TaxID=34632 RepID=UPI00189321FD)

HSP 1 Score: 95.1 bits (235), Expect = 8.120e-17
Identity = 71/250 (28.40%), Postives = 123/250 (49.20%), Query Frame = 2
Query: 2555 LSRMSIIEVSS-----LTGMPGFECWREFYNILNINGNADNLLYYSDPEAAGGTEWSIQRRRWKHKLETERCLLFTLFTLRTGSPVAVASVLLGVSSPVGTRCSTTWVNFLWRSSKVFVRLPSPQEVVENAPDSFVRCGLQKVVLVLDGTEIETERHWHTDLAHVLWSPYKQRPTAKLLVGITAWGSICFVSKAFGGHLSDVEIVRRSGLVEKLEKLGFCGKGYSILVDRGLYHLG*DLVLKGMTLVEPP 3289
            L  + +IE SS      TG+P +  ++  +N L    +   ++ Y   E   G++  ++ R  + +L TE      L  L+TG      +    +S    +R   TW+NFL +  +   +LP+ + + +  P SF   G +   LVLD TE+ +ER          +SPYK   T K+L+G T  G + + S+ +GG +SD  I++ SGL+++L+       G +I+VD+G        + +G+T+  PP
Sbjct:   98 LLTLGLIEKSSKDCLYYTGLPNYGVFQSLFNYLKPRAS---MMSYWGWEKKTGSD--VRGRPKEIELVTE--FFMVLVRLKTGMAGRELARNFMMSPTQVSRIFATWINFLEQELEQLTKLPTREAIAQYLPKSFK--GFENTRLVLDATEVRSERPSSFHGQRQTFSPYKHYNTYKVLIGCTPDGYVAYASRIWGGSVSDKTILQSSGLLDRLQS------GDAIMVDKGFTF---PYLPQGITIYRPP 329          
BLAST of mRNA_D-dichotoma_M_contig95.20213.1 vs. uniprot
Match: A0A8B8EYR9_CRAVI (uncharacterized protein LOC111137789 n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8EYR9_CRAVI)

HSP 1 Score: 95.5 bits (236), Expect = 1.240e-16
Identity = 65/240 (27.08%), Postives = 115/240 (47.92%), Query Frame = 2
Query: 2591 TGMPGFECWREFYNILNINGNADNLLYYSDPEAAGGTEWSIQRRRW---KHKLETERCLLFTLFTLRTGSPVAVASVLLGVSSPVGTRCSTTWVNFLWRSSKVFVRLPSPQEVVENAPDSFVRCGLQKVVLVLDGTEIETERHWHTDLAHVLWSPYKQRPTAKLLVGITAWGSICFVSKAFGGHLSDVEIVRRSGLVEKLEKLGFCGKGYSILVDRGLYHLG*DLVLKGMTLVEPPTLAR 3301
            TG+  +  +   +N   +   A N+ YY   ++     +     +    K KL  E  LL T+  LR    +   + +  VS  + +   +TW+  L +     +  PS +E+ +  P  F + G   V  ++D TE++TER        +++S YK R T K L+  T  G+  +VS+  GG +SDV++VR+SGL+ K++K         I+ D+G  +   D +++G  L+ P  L +
Sbjct:  182 TGLSSYALFSWIFN--EVKDVAVNMKYYKGEQSLDTKSYQESNGKKPGPKRKLSMEDELLMTIMKLRLNLNLEFLASMFQVSVSLVSSVVSTWIILLSKELVPLIHWPSHEELTQYYPQCFEKYGT--VSAIIDCTEVQTERPTLDSANSMMFSNYKGRHTYKALIACTPGGTASYVSQVCGGDMSDVDVVRKSGLLNKIKK------NDKIMADKGFSNKD-DFLIEGAQLITPEILRK 410          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig95.20213.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8B6C2M9_MYTGA9.640e-2130.12Uncharacterized protein n=1 Tax=Mytilus galloprovi... [more]
A0A8B6HG43_MYTGA4.030e-2030.12THAP-type domain-containing protein n=1 Tax=Mytilu... [more]
A0A7D9EAL5_PARCT1.370e-1828.38THAP domain-containing 6 n=1 Tax=Paramuricea clava... [more]
UPI001CF1BC134.300e-1834.54uncharacterized protein LOC114976189 n=1 Tax=Acrop... [more]
A0A1E1XPL8_9ACAR4.440e-1828.99Putative isl2eu-1 adi (Fragment) n=2 Tax=Amblyomma... [more]
UPI001C0590C42.290e-1731.58uncharacterized protein LOC121639649 n=1 Tax=Melan... [more]
A0A6B0VAI1_IXORI4.070e-1731.30Putative dde superfamily endonuclease n=2 Tax=Ixod... [more]
UPI00189994094.670e-1730.43uncharacterized protein LOC119437367 n=2 Tax=Derma... [more]
UPI00189321FD8.120e-1728.40uncharacterized protein LOC119400736 n=1 Tax=Rhipi... [more]
A0A8B8EYR9_CRAVI1.240e-1627.08uncharacterized protein LOC111137789 n=1 Tax=Crass... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig95contigD-dichotoma_M_contig95:33473..37417 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score94.0
Seed ortholog evalue1.3e-16
Seed eggNOG ortholog7668.SPU_024105-tr
EggNOG free text desc.DDE superfamily endonuclease
EggNOG OGs2CQK3@1,2S458@2759,3A7MN@33154,3BSRK@33208,3DFYF@33213
COG Functional cat.S
Best tax levelBilateria
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons2
Model size3607
Cds size891
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig95.20213.1prot_D-dichotoma_M_contig95.20213.1Dictyota dichotoma ODC1387m malepolypeptideD-dichotoma_M_contig95 35832..37060 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931200.4876196-UTR-D-dichotoma_M_contig95:33472..358311622931200.4876196-UTR-D-dichotoma_M_contig95:33472..35831Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig95 33473..35831 +
1690799661.8541553-UTR-D-dichotoma_M_contig95:33472..358311690799661.8541553-UTR-D-dichotoma_M_contig95:33472..35831Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig95 33473..35831 +
1622931200.5815432-UTR-D-dichotoma_M_contig95:37060..374171622931200.5815432-UTR-D-dichotoma_M_contig95:37060..37417Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig95 37061..37417 +
1690799661.8887782-UTR-D-dichotoma_M_contig95:37060..374171690799661.8887782-UTR-D-dichotoma_M_contig95:37060..37417Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig95 37061..37417 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931200.5447028-CDS-D-dichotoma_M_contig95:35831..360921622931200.5447028-CDS-D-dichotoma_M_contig95:35831..36092Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig95 35832..36092 +
1690799661.867413-CDS-D-dichotoma_M_contig95:35831..360921690799661.867413-CDS-D-dichotoma_M_contig95:35831..36092Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig95 35832..36092 +
1622931200.5657797-CDS-D-dichotoma_M_contig95:36430..370601622931200.5657797-CDS-D-dichotoma_M_contig95:36430..37060Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig95 36431..37060 +
1690799661.8783796-CDS-D-dichotoma_M_contig95:36430..370601690799661.8783796-CDS-D-dichotoma_M_contig95:36430..37060Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig95 36431..37060 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dichotoma_M_contig95.20213.1

>prot_D-dichotoma_M_contig95.20213.1 ID=prot_D-dichotoma_M_contig95.20213.1|Name=mRNA_D-dichotoma_M_contig95.20213.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=297bp
MRRPKQAVYREFRAELSGLALEEAWQKETIAHHETGLARDAAKTKVSKGG
EEEKDYSDALIFVESLSRMSIIEVSSLTGMPGFECWREFYNILNINGNAD
NLLYYSDPEAAGGTEWSIQRRRWKHKLETERCLLFTLFTLRTGSPVAVAS
VLLGVSSPVGTRCSTTWVNFLWRSSKVFVRLPSPQEVVENAPDSFVRCGL
QKVVLVLDGTEIETERHWHTDLAHVLWSPYKQRPTAKLLVGITAWGSICF
VSKAFGGHLSDVEIVRRSGLVEKLEKLGFCGKGYSILVDRGLYHLG*
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mRNA from alignment at D-dichotoma_M_contig95:33473..37417+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dichotoma_M_contig95.20213.1 ID=mRNA_D-dichotoma_M_contig95.20213.1|Name=mRNA_D-dichotoma_M_contig95.20213.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=3945bp|location=Sequence derived from alignment at D-dichotoma_M_contig95:33473..37417+ (Dictyota dichotoma ODC1387m male)
TCCGTTACACCCGTGAGCACCACTGTAGACGAGATCGTCCCTCAGTCTCA ATTGTCGTCTTCGGGTGTTCTCCTGATGTTTTGTGTCGTTGTCTTCTGAG ATACAGCCATCCACCATGGCCTGATGTACAATAATGCAAAGACCCATTAT GTGTTAACGGTACAAGATCTCTCTTCTACATCATGGTAAGCTGGGACTAT TCAACACGCTCCGAACATGACGCTTAGCGCCCTGGGTACCCCTACGGCGT CACTTTCCAGTTCTACGCGAACCATGGCTGAGACACAGCCCCATCGACCT GAAGACATATCGTCTTGATCTTGAAGCAATGACCAAGCGAATGAGAAGCT GGCAAGATGTGGACAAGATGGAGAGACAGATCGGACATCGGCAGACCACC CGGCTGACGCCAAGGTTTGGGAGCGGGGCAACTGAAGAAGATAACTCCGG GCAGCTGGTAGGAGGGGCGGATGGCTCCCTCTGGACTACCCGTACATCAA TGTTCCGCAAGGGAGTGGAACAGAGTGAGATAAACCTCACGAAATCTGAT GTAGTGTATTAGAATTGCTGTAAGCGTCGTCTAGCGTTGAAACAGTGCGA TGAGAGCGATGTGTGTGTGCCTGAGTCTTGTTGAAAATTCAGATAAGAGG AGTCTGATGATCTCGTGTGTCACTGTAGCGGCACGATCTTTTGTTGACAT ACGCGGAGTTCGGGTGCAAGTTTGCGCACGGCATGAGAATTTTGAAGTAG TCATGTTCCATCCAGGAGGAGCATCAGTTGGATTGTTTCTGGAGTGTTAT GGTGCCTGAGTCGGATGTTGCTATCGTTGACAACGTGAGACTGTTCTGGT CAAAGTTGTTGTTAGACAATCGAGTGTTAGCGGAATTTTCGATTTTAGTC CCATTTACCGTTAACAGAAACAGACGATAACGGACGCTAGATTCGGCGAT ATCCGAGTTAAACTTTAGAATAGCCAACTAGAGTCTCTTTCCAGGCATTC GTGATGATCACCGGCACAACCAGTCCAATCTACACCCAGCGACACAATCC CGCCGCACTCTTTACCGAGAGGGTTCCATGAATATGCAAAGTTTTGAGGT TAACTTCGGGGATCTTCATGGAAATCCTCTCAAATTCTTATAAATTTTCG TGGTGCCGTTCGTCAAGGGGCAACACAGGTGAAGTTAGCGATAAAGTAAA TTCGCTTGCAAAAAAATCTACAACTCTAAATCTCATCAGATCAGATTTCG CCGAGTCTACAGTAGTTTCCGTTGTCGTCGGTTTCTGGTGACGATAAATT AAACTATATTTATAATTTTCGCAAACACCCTAATGATTCCCGATTGTTGA TACTGTAGAAGCTTGTTTTTAGAACGAGATTGGACTTCCGCCATCCGATG CAACGTGGTGAACTGATTGGCCAGAGGATTTATTCCCCAACCGCTGGCCA AATTTCCTTCACAAGGAAGGTATTACATCGCAAAGGTTTCATGGGTGGTA AGTCGGTAGTCACCATTCGGAGTGTTGATAAGTGACGGTTACAGAAACTT CGTTTAGTCGTCCCTGAGGTCCACTACTGCTGCTATGGACTACGACTTGT ATCGATATCGTGACTATGGAGCAGAGCCAGTTGGCGCCCTTCTTGCCCAC TCTGTCTTTGCGCGCTCTCGCTCTGGTATCCTACTGATACACTGGTGTGT GTCTGGTATTCTAGGTCTATTCTTGTGGTGAGGTCTTACTCTTGTGATTG GGTCGCTGTAACTACGTGTATCCCGGTGGGTTAAGTGAGGCATACGTTGT AAGCTAATCCATTTCTGTAAACTGATCCGAGACTGCTGTGAGCACTAGAC ACGGAACTGAGTGAACATACGAGATCATTCAACACGGAGTAAGACAGTTT TTCAATCATCACGCACGTCGTAGGTCATATGATCAATCTTCTCATGGTTT CTCGCTGAGCTTGACTATCGCTTTTGAGTTGCGTATAAGCCAAAAAGGGC CATTGACCTCACTTGGGTGCTATACATTAAAGCAGTATATTTTGCGTCCC CGTAAGATGGTCGTCGTACGCATACAATCATACGCGCTTTTTCACCGTAT CACCTCGTAGCTGAGGAAATATGACCAACAGGAGGAAGGGGTGCGTTTGT GGAGAAGACTTCCCCAAGAGAACGAGACGAGAGAGGAGTGGCTCAAGACG TTGAAGGTTGATCCAGCTACGTTTGTTTTGAAAGGTCGTCGCGTAGGCGC ACTGCATTTCTCACCCTCGGACCTGGAGGTGAAGACCCACATGGGAAACG TTCGTCAGGATCGAAGAGCGAAGCTTACGGAACCATAGAAATATGCAGAG GAGGAGATTATGAGAAGGCCGAAGCAGGCCGTGTACAGGGAATTCCGGGC GGAGTTATCGGGTCTTGCGTTGGAAGAGGCGTGGCAGAAGGAGACAATTG CCCATCACGAGACGGGTCTTGCCCGTGACGCTGCGAAGACAAAGGTCTCC AAGGGTGGGGAGGAGGAGAAAGATTATTCTGACGCTTTGATCTTTGTGGA AAGCCTTTCCCGGATGTCAATAATCGAGGTTTCTTCGCTCACCGGCATGC CGGGATTCGAGTGCTGGAGGGTGAGTGGCAAGCTGTTTCCAGATGTACTG TTCTAATGGCCTTTCGAATAGCGTACGTGTTTCTTGTCCAGCGGATTAGG TTGAAACAGAGCAATGCGGCGTTGTTTGGGTGTCTTTAGTTTGTGATGAG CATGGCAGTCGTTACTATCATAATATACAGTACTGTATAGGTTGTCACAG CCGGAAGCAGGTTTTTACTCATTCCTGCAATCGGCTGAGGAATCCGATTG AGTTATTTGACGTCGTTCGTGTTGTAAATCAGGACTGCGTTTTCGTCACG CAATGACGCCATAGGATAGTTCATGTTTGTGAACCCTCGCAAATCGTGTA TCCCGCAGGAATTCTACAATATCCTAAACATCAATGGAAATGCTGACAAC CTCCTGTACTATAGCGACCCCGAAGCTGCGGGAGGTACGGAATGGAGCAT CCAACGTAGAAGATGGAAGCACAAACTGGAGACCGAGAGGTGCCTTTTGT TCACGCTCTTCACGTTGAGAACAGGCAGTCCAGTCGCCGTGGCGTCCGTC TTGCTTGGAGTGAGCTCACCGGTTGGGACAAGGTGTTCAACAACGTGGGT GAATTTCTTGTGGCGCTCGAGCAAGGTGTTTGTTCGTTTACCCTCGCCGC AGGAAGTTGTGGAAAACGCACCTGATTCGTTCGTCAGGTGTGGTCTACAA AAGGTTGTCCTGGTTCTCGATGGAACTGAAATCGAGACCGAGCGGCACTG GCATACAGACCTTGCCCACGTCTTGTGGTCTCCTTACAAGCAAAGGCCAA CGGCGAAGCTGCTGGTTGGTATTACGGCGTGGGGCAGTATATGCTTCGTT TCGAAAGCCTTTGGGGGGCATCTCAGTGATGTCGAGATCGTACGAAGATC TGGACTCGTTGAGAAACTAGAAAAGCTGGGGTTTTGTGGTAAGGGTTATT CCATTCTGGTGGATCGAGGACTTTATCATCTTGGTTAAGATCTTGTGCTC AAGGGTATGACTCTGGTTGAGCCACCGACGCTCGCAAGGGCGAAGCCCAA TTATCGAAAGAGGATCTAAATGTGTCATACGGTGTGGCGCGCCTCCGCGT CCATGTAGAGCGTGCCATAGGAGCGATGAAACAGTGGCGTTTTATGACAG GCAAAATTTCTTTTGGACAACTGGACCTCCTTGGCATGGCTGTGCATGCT CTCGCCGCCATTGTCAACTTGACCAATGCTGGATTTGTATCCCGAACGCA CGTATCACATGGAGGTCGTCAACGGGAAGCAGAAGGTAGTGAACCATGGA ATGAAGATCCCTGTGACAACGAGTGTTAGGTCTCGAGGGGCAGTA
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Coding sequence (CDS) from alignment at D-dichotoma_M_contig95:33473..37417+

>mRNA_D-dichotoma_M_contig95.20213.1 ID=mRNA_D-dichotoma_M_contig95.20213.1|Name=mRNA_D-dichotoma_M_contig95.20213.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=1782bp|location=Sequence derived from alignment at D-dichotoma_M_contig95:33473..37417+ (Dictyota dichotoma ODC1387m male)
ATGAGAAGGCCGAAGCAGGCCGTGTACAGGGAATTCCGGGCGGAGTTATC
GGGTCTTGCGTTGGAAGAGGCGTGGCAGAAGGAGACAATTGCCCATCACG
AGACGGGTCTTGCCCGTGACGCTGCGAAGACAAAGGTCTCCAAGGGTGGG
GAGGAGGAGAAAGATTATTCTGACGCTTTGATCTTTGTGGAAAGCCTTTC
CCGGATGTCAATAATCGAGGTTTCTTCGCTCACCGGCATGCCGGGATTCG
AGTGCTGGAGGATGAGAAGGCCGAAGCAGGCCGTGTACAGGGAATTCCGG
GCGGAGTTATCGGGTCTTGCGTTGGAAGAGGCGTGGCAGAAGGAGACAAT
TGCCCATCACGAGACGGGTCTTGCCCGTGACGCTGCGAAGACAAAGGTCT
CCAAGGGTGGGGAGGAGGAGAAAGATTATTCTGACGCTTTGATCTTTGTG
GAAAGCCTTTCCCGGATGTCAATAATCGAGGTTTCTTCGCTCACCGGCAT
GCCGGGATTCGAGTGCTGGAGGGAATTCTACAATATCCTAAACATCAATG
GAAATGCTGACAACCTCCTGTACTATAGCGACCCCGAAGCTGCGGGAGGT
ACGGAATGGAGCATCCAACGTAGAAGATGGAAGCACAAACTGGAGACCGA
GAGGTGCCTTTTGTTCACGCTCTTCACGTTGAGAACAGGCAGTCCAGTCG
CCGTGGCGTCCGTCTTGCTTGGAGTGAGCTCACCGGTTGGGACAAGGTGT
TCAACAACGTGGGTGAATTTCTTGTGGCGCTCGAGCAAGGTGTTTGTTCG
TTTACCCTCGCCGCAGGAAGTTGTGGAAAACGCACCTGATTCGTTCGTCA
GGTGTGGTCTACAAAAGGTTGTCCTGGTTCTCGATGGAACTGAAATCGAG
ACCGAGCGGCACTGGCATACAGACCTTGCCCACGTCTTGTGGTCTCCTTA
CAAGCAAAGGCCAACGGCGAAGCTGCTGGTTGGTATTACGGCGTGGGGCA
GTATATGCTTCGTTTCGAAAGCCTTTGGGGGGCATCTCAGTGATGTCGAG
ATCGTACGAAGATCTGGACTCGTTGAGAAACTAGAAAAGCTGGGGTTTTG
TGGTAAGGGTTATTCCATTCTGGTGGATCGAGGACTTTATCATCTTGGTT
AAGAATTCTACAATATCCTAAACATCAATGGAAATGCTGACAACCTCCTG
TACTATAGCGACCCCGAAGCTGCGGGAGGTACGGAATGGAGCATCCAACG
TAGAAGATGGAAGCACAAACTGGAGACCGAGAGGTGCCTTTTGTTCACGC
TCTTCACGTTGAGAACAGGCAGTCCAGTCGCCGTGGCGTCCGTCTTGCTT
GGAGTGAGCTCACCGGTTGGGACAAGGTGTTCAACAACGTGGGTGAATTT
CTTGTGGCGCTCGAGCAAGGTGTTTGTTCGTTTACCCTCGCCGCAGGAAG
TTGTGGAAAACGCACCTGATTCGTTCGTCAGGTGTGGTCTACAAAAGGTT
GTCCTGGTTCTCGATGGAACTGAAATCGAGACCGAGCGGCACTGGCATAC
AGACCTTGCCCACGTCTTGTGGTCTCCTTACAAGCAAAGGCCAACGGCGA
AGCTGCTGGTTGGTATTACGGCGTGGGGCAGTATATGCTTCGTTTCGAAA
GCCTTTGGGGGGCATCTCAGTGATGTCGAGATCGTACGAAGATCTGGACT
CGTTGAGAAACTAGAAAAGCTGGGGTTTTGTGGTAAGGGTTATTCCATTC
TGGTGGATCGAGGACTTTATCATCTTGGTTAA
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