mRNA_D-dichotoma_M_contig934.20084.1 (mRNA) Dictyota dichotoma ODC1387m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dichotoma_M_contig934.20084.1
Unique NamemRNA_D-dichotoma_M_contig934.20084.1
TypemRNA
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Homology
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BLAST of mRNA_D-dichotoma_M_contig934.20084.1 vs. uniprot
Match: D7FY76_ECTSI (Serine O-acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY76_ECTSI)

HSP 1 Score: 100 bits (250), Expect = 5.110e-24
Identity = 49/72 (68.06%), Postives = 56/72 (77.78%), Query Frame = 1 
Query:    1 KQVPVGAKRHPTVGDNVVIGAGAKILGDIEIXXXXXXXXNSVVTKSVPANHTAVGIPARVLCRGSGVGKDVT 216
            K+V  G KRHPT+GD VV+GAGAKILGDI I        NSVVTKSVP +HTAVG+PAR+LCRG+  GKDVT
Sbjct:  137 KKVSPGGKRHPTIGDRVVLGAGAKILGDITIEDDVLVGANSVVTKSVPKHHTAVGVPARILCRGTCTGKDVT 208
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BLAST of mRNA_D-dichotoma_M_contig934.20084.1 vs. uniprot
Match: A0A6H5KDD3_9PHAE (Serine O-acetyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDD3_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 4.300e-22
Identity = 46/72 (63.89%), Postives = 55/72 (76.39%), Query Frame = 1 
Query:    1 KQVPVGAKRHPTVGDNVVIGAGAKILGDIEIXXXXXXXXNSVVTKSVPANHTAVGIPARVLCRGSGVGKDVT 216
            K+V  G KRHPT+GD VV+GAGAKILGDI +        NSVVTKSVP +HTAVG+PAR+LC G+  GK+VT
Sbjct:  135 KKVSPGGKRHPTIGDRVVLGAGAKILGDITVEDDVLVGANSVVTKSVPKHHTAVGVPARILCHGTCSGKNVT 206
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BLAST of mRNA_D-dichotoma_M_contig934.20084.1 vs. uniprot
Match: D9QC77_CORP2 (Serine acetyltransferase n=5 Tax=Corynebacterium TaxID=1716 RepID=D9QC77_CORP2)

HSP 1 Score: 75.9 bits (185), Expect = 1.970e-15
Identity = 40/65 (61.54%), Postives = 44/65 (67.69%), Query Frame = 1 
Query:    4 QVPVGAKRHPTVGDNVVIGAGAKILGDIEIXXXXXXXXNSVVTKSVPANHTAVGIPARVLCRGSG 198
            QV    KRHPTV DNV IGAGAK+LG I I        N+VVTK VPANH AVGIPA+   RG+G
Sbjct:  112 QVLTQTKRHPTVEDNVTIGAGAKVLGPITIGEGSAIGANAVVTKDVPANHIAVGIPAKNRPRGAG 176
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BLAST of mRNA_D-dichotoma_M_contig934.20084.1 vs. uniprot
Match: A0A0E3N762_CORUL (Serine acetyltransferase n=4 Tax=Corynebacterium TaxID=1716 RepID=A0A0E3N762_CORUL)

HSP 1 Score: 75.9 bits (185), Expect = 1.970e-15
Identity = 40/65 (61.54%), Postives = 44/65 (67.69%), Query Frame = 1 
Query:    4 QVPVGAKRHPTVGDNVVIGAGAKILGDIEIXXXXXXXXNSVVTKSVPANHTAVGIPARVLCRGSG 198
            QV    KRHPTV DNV IGAGAK+LG I I        N+VVTK VPANH AVGIPA+   RG+G
Sbjct:  112 QVLTQTKRHPTVEDNVTIGAGAKVLGPITIGEGSAIGANAVVTKDVPANHIAVGIPAKNRPRGAG 176
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BLAST of mRNA_D-dichotoma_M_contig934.20084.1 vs. uniprot
Match: A0A2E6J164_9PROT (Serine acetyltransferase n=1 Tax=Pelagibacteraceae bacterium TaxID=2026775 RepID=A0A2E6J164_9PROT)

HSP 1 Score: 75.5 bits (184), Expect = 2.310e-15
Identity = 37/67 (55.22%), Postives = 46/67 (68.66%), Query Frame = 1 
Query:   13 VGAKRHPTVGDNVVIGAGAKILGDIEIXXXXXXXXNSVVTKSVPANHTAVGIPARVLCRGSGVGKDV 213
            V  KRHPT+ DNV+IGAGAK+LG I +        NSVVTK+VP+N T +GIPARV+   SG G  +
Sbjct:  113 VKKKRHPTIADNVIIGAGAKVLGPITVGKSSKIGANSVVTKNVPSNTTVIGIPARVIDNTSGDGAGI 179
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BLAST of mRNA_D-dichotoma_M_contig934.20084.1 vs. uniprot
Match: A0A426VZP4_9PROT (Serine acetyltransferase n=1 Tax=Epsilonproteobacteria bacterium (ex Lamellibrachia satsuma) TaxID=2496635 RepID=A0A426VZP4_9PROT)

HSP 1 Score: 76.3 bits (186), Expect = 3.100e-15
Identity = 38/57 (66.67%), Postives = 44/57 (77.19%), Query Frame = 1 
Query:   22 KRHPTVGDNVVIGAGAKILGDIEIXXXXXXXXNSVVTKSVPANHTAVGIPARVLCRG 192
            KRHPT+G+NVVIGAGAK+LG+I I        NSVV K VPA+ TA+GIPARVL RG
Sbjct:  117 KRHPTLGNNVVIGAGAKVLGNITIGANSKVGANSVVVKDVPADSTAIGIPARVLKRG 173
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BLAST of mRNA_D-dichotoma_M_contig934.20084.1 vs. uniprot
Match: A0A1W1BAX8_9ZZZZ (Serine O-acetyltransferase n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A1W1BAX8_9ZZZZ)

HSP 1 Score: 76.3 bits (186), Expect = 3.100e-15
Identity = 39/60 (65.00%), Postives = 44/60 (73.33%), Query Frame = 1 
Query:   13 VGAKRHPTVGDNVVIGAGAKILGDIEIXXXXXXXXNSVVTKSVPANHTAVGIPARVLCRG 192
            V  KRHPT+ DNVVIGAGA+ILGDI I        NSVV K VPA+ TA+GIPARV+ RG
Sbjct:  114 VCGKRHPTIEDNVVIGAGARILGDITIGKNSKVGANSVVIKDVPADSTAIGIPARVIKRG 173
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BLAST of mRNA_D-dichotoma_M_contig934.20084.1 vs. uniprot
Match: A0A2S6RTU6_9PROT (Serine acetyltransferase n=2 Tax=unclassified Alphaproteobacteria TaxID=33807 RepID=A0A2S6RTU6_9PROT)

HSP 1 Score: 74.7 bits (182), Expect = 4.600e-15
Identity = 37/67 (55.22%), Postives = 44/67 (65.67%), Query Frame = 1 
Query:   13 VGAKRHPTVGDNVVIGAGAKILGDIEIXXXXXXXXNSVVTKSVPANHTAVGIPARVLCRGSGVGKDV 213
            V  KRHPT+ DNVVIGAGAKILG I I        NSVV K VP+N T +GIPAR++   +G G  +
Sbjct:  113 VKKKRHPTINDNVVIGAGAKILGPINIGKNSKIGANSVVIKDVPSNTTVIGIPARIIDNSTGYGSGI 179
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BLAST of mRNA_D-dichotoma_M_contig934.20084.1 vs. uniprot
Match: A6QA05_SULNB (Serine acetyltransferase n=4 Tax=root TaxID=1 RepID=A6QA05_SULNB)

HSP 1 Score: 75.5 bits (184), Expect = 6.090e-15
Identity = 39/57 (68.42%), Postives = 45/57 (78.95%), Query Frame = 1 
Query:   22 KRHPTVGDNVVIGAGAKILGDIEIXXXXXXXXNSVVTKSVPANHTAVGIPARVLCRG 192
            KRHPT+G+NVVIGAG+KILG+I I  X     NSVV K VPA+ TA+GIPARVL RG
Sbjct:  117 KRHPTLGNNVVIGAGSKILGNITIGEXSKVGANSVVVKDVPADSTAIGIPARVLKRG 173
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BLAST of mRNA_D-dichotoma_M_contig934.20084.1 vs. uniprot
Match: A0A257H6T3_9BURK (Serine acetyltransferase (Fragment) n=1 Tax=Burkholderiales bacterium PBB4 TaxID=2015566 RepID=A0A257H6T3_9BURK)

HSP 1 Score: 73.6 bits (179), Expect = 6.650e-15
Identity = 37/67 (55.22%), Postives = 45/67 (67.16%), Query Frame = 1 
Query:   16 GAKRHPTVGDNVVIGAGAKILGDIEIXXXXXXXXNSVVTKSVPANHTAVGIPARVLCRGSGVGKDVT 216
            G+KRHPT+G +VV+ AGAK+LG  E+        N+VV K VPA  TAVGIPAR+L    GV  DVT
Sbjct:    5 GSKRHPTLGKDVVVSAGAKVLGGFEVGDGAKIGSNAVVIKPVPAGATAVGIPARILPSKEGVSADVT 71
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig934.20084.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FY76_ECTSI5.110e-2468.06Serine O-acetyltransferase n=1 Tax=Ectocarpus sili... [more]
A0A6H5KDD3_9PHAE4.300e-2263.89Serine O-acetyltransferase n=1 Tax=Ectocarpus sp. ... [more]
D9QC77_CORP21.970e-1561.54Serine acetyltransferase n=5 Tax=Corynebacterium T... [more]
A0A0E3N762_CORUL1.970e-1561.54Serine acetyltransferase n=4 Tax=Corynebacterium T... [more]
A0A2E6J164_9PROT2.310e-1555.22Serine acetyltransferase n=1 Tax=Pelagibacteraceae... [more]
A0A426VZP4_9PROT3.100e-1566.67Serine acetyltransferase n=1 Tax=Epsilonproteobact... [more]
A0A1W1BAX8_9ZZZZ3.100e-1565.00Serine O-acetyltransferase n=1 Tax=hydrothermal ve... [more]
A0A2S6RTU6_9PROT4.600e-1555.22Serine acetyltransferase n=2 Tax=unclassified Alph... [more]
A6QA05_SULNB6.090e-1568.42Serine acetyltransferase n=4 Tax=root TaxID=1 RepI... [more]
A0A257H6T3_9BURK6.650e-1555.22Serine acetyltransferase (Fragment) n=1 Tax=Burkho... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig934contigD-dichotoma_M_contig934:186629..187308 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score77.0
Seed ortholog evalue3.9e-12
Seed eggNOG ortholog1719.CPTC_01120
Preferred namecysE
KEGG rclassRC00004,RC00041
KEGG koko:K00640
KEGG ReactionR00586
KEGG Pathwayko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111
KEGG ModuleM00021
GOsGO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009001,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016407,GO:0016412,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019344,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
EggNOG free text desc.serine acetyltransferase
EggNOG OGs22K6Y@1653,2IHW5@201174,COG1045@1,COG1045@2
EC2.3.1.30
COG Functional cat.E
BiGG ReactioniJN746.PP_0840
Best tax levelCorynebacteriaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Exons2
Model size218
Cds size216
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931176.9911015-CDS-D-dichotoma_M_contig934:186630..1866831622931176.9911015-CDS-D-dichotoma_M_contig934:186630..186683Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig934 186631..186683 -
1690799650.3569586-CDS-D-dichotoma_M_contig934:186630..1866831690799650.3569586-CDS-D-dichotoma_M_contig934:186630..186683Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig934 186631..186683 -
1622931177.0145605-CDS-D-dichotoma_M_contig934:187145..1873081622931177.0145605-CDS-D-dichotoma_M_contig934:187145..187308Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig934 187146..187308 -
1690799650.3739927-CDS-D-dichotoma_M_contig934:187145..1873081690799650.3739927-CDS-D-dichotoma_M_contig934:187145..187308Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig934 187146..187308 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig934.20084.1prot_D-dichotoma_M_contig934.20084.1Dictyota dichotoma ODC1387m malepolypeptideD-dichotoma_M_contig934 186631..187308 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dichotoma_M_contig934.20084.1

>prot_D-dichotoma_M_contig934.20084.1 ID=prot_D-dichotoma_M_contig934.20084.1|Name=mRNA_D-dichotoma_M_contig934.20084.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=72bp
KQVPVGAKRHPTVGDNVVIGAGAKILGDIEIGDNVLVGANSVVTKSVPAN
HTAVGIPARVLCRGSGVGKDVT
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mRNA from alignment at D-dichotoma_M_contig934:186629..187308-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dichotoma_M_contig934.20084.1 ID=mRNA_D-dichotoma_M_contig934.20084.1|Name=mRNA_D-dichotoma_M_contig934.20084.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=680bp|location=Sequence derived from alignment at D-dichotoma_M_contig934:186629..187308- (Dictyota dichotoma ODC1387m male)
AAGCAGGTGCCCGTTGGGGCCAAGAGACACCCCACGGTCGGGGATAACGT
TGTGATCGGCGCGGGAGCGAAGATACTCGGAGATATCGAGATTGGCGACA
ACGTGCTGGTCGGGGCAAACTCTGTGGTGACCAAGTCGGTGCCAGCGAAC
CACACGGCGGTGGGTGAGTGCCGTTGTGGGCGGGATTGTTTGACTTGCAG
CCGTTCGGCTTGAGAGGTACCGCGAGAGTAGAGGGGGGGGTCGTACGACG
AATGCCGGGGAAGCCAGCACTCAATGTTCGCAGGGCGTATTTGGTCACGT
GGGACTATCGGTGATTCATTCTCACCCCATCCCCCATCGAGTTTCACAGG
GATCGTAGGACGGAACACCGTGTGCTGCACAACGAGCGAAACCCCATTAG
TCGCGTAGGTACGGTGCTTCCGGAGTTGCATGTTGTTGACGAGGAGATTC
TCATTTTGACTTTCGCTGCCACCTGCCCAGATCCATGGATCGCAGGGGCA
CGCGGTTTCGGAGGTACAGTAGTCCGTTCGGTCAGCCCTTGCTTGTGAGT
TTTTACCAGAATGCAGCACTTCTAACGTGGCCCCAGCTGTGGTATGTAAA
CACTGCCTGATATCGCATCGTACAGGCATTCCAGCGCGAGTCTTGTGCCG
CGGCTCGGGCGTCGGGAAGGACGTGACCGG
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Coding sequence (CDS) from alignment at D-dichotoma_M_contig934:186629..187308-

>mRNA_D-dichotoma_M_contig934.20084.1 ID=mRNA_D-dichotoma_M_contig934.20084.1|Name=mRNA_D-dichotoma_M_contig934.20084.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=432bp|location=Sequence derived from alignment at D-dichotoma_M_contig934:186629..187308- (Dictyota dichotoma ODC1387m male)
AAGCAGGTGCCCGTTGGGGCCAAGAGACACCCCACGGTCGGGGATAACGT
TGTGATCGGCGCGGGAGCGAAGATACTCGGAGATATCGAGATTGGCGACA
ACGTGCTGGTCGGGGCAAACTCTGTGGTGACCAAGTCGGTGCCAGCGAAC
CACACGGCGGTGGAAGCAGGTGCCCGTTGGGGCCAAGAGACACCCCACGG
TCGGGGATAACGTTGTGATCGGCGCGGGAGCGAAGATACTCGGAGATATC
GAGATTGGCGACAACGTGCTGGTCGGGGCAAACTCTGTGGTGACCAAGTC
GGTGCCAGCGAACCACACGGCGGTGGGCATTCCAGCGCGAGTCTTGTGCC
GCGGCTCGGGCGTCGGGAAGGACGTGACCGCATTCCAGCGCGAGTCTTGT
GCCGCGGCTCGGGCGTCGGGAAGGACGTGACC
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