mRNA_D-dichotoma_M_contig925.19987.1 (mRNA) Dictyota dichotoma ODC1387m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dichotoma_M_contig925.19987.1
Unique NamemRNA_D-dichotoma_M_contig925.19987.1
TypemRNA
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Homology
[Close]
BLAST of mRNA_D-dichotoma_M_contig925.19987.1 vs. uniprot
Match: D7FMA0_ECTSI (Uridine kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMA0_ECTSI)

HSP 1 Score: 248 bits (633), Expect = 4.720e-81
Identity = 126/175 (72.00%), Postives = 144/175 (82.29%), Query Frame = 1 
Query:   13 KPIVLGIAGGSGSGKTTLSRAVIKEIG-AENVSYLCHDCYYRDLSHLPMDKRGETNFDHPDALETSLMAQHLARLKAGFTVEVPTYDFKVHSRKAATIRTEPRRVIIVEGILIFCDPCLRDKLDVKIFVDTVGDIRFIRRMKRDLAERNRTVDEVVGQYLATVRPMHELYVQPSQ 534
            KP+V+GIAGGSGSGKTTLSRAV++ +G A  V+Y+CHD YYRDLSHLP+++R +TNFDHPDALETSL+ + L  LKAG   +VP YDF VHSRK  T R E R VIIVEGILIF    LRD LDVKIFVDT  DIRFIRRM+RD+AERNRT DEVV QYLATVRPMHEL+V PS+
Sbjct:    2 KPVVVGIAGGSGSGKTTLSRAVVEALGGARRVTYICHDYYYRDLSHLPIEQRAKTNFDHPDALETSLLVKQLEVLKAGGAADVPMYDFTVHSRKEETTRAEGRGVIIVEGILIFAHAELRDLLDVKIFVDTEPDIRFIRRMQRDIAERNRTADEVVAQYLATVRPMHELFVTPSK 176
[Close]
BLAST of mRNA_D-dichotoma_M_contig925.19987.1 vs. uniprot
Match: A0A7C7UZ41_9CHLR (Uridine kinase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C7UZ41_9CHLR)

HSP 1 Score: 228 bits (581), Expect = 3.910e-73
Identity = 103/177 (58.19%), Postives = 140/177 (79.10%), Query Frame = 1 
Query:    4 TVNKPIVLGIAGGSGSGKTTLSRAVIKEIGAENVSYLCHDCYYRDLSHLPMDKRGETNFDHPDALETSLMAQHLARLKAGFTVEVPTYDFKVHSRKAATIRTEPRRVIIVEGILIFCDPCLRDKLDVKIFVDTVGDIRFIRRMKRDLAERNRTVDEVVGQYLATVRPMHELYVQPSQ 534
            +  +PI++G+AGG+GSGKTT+S+A++  +G + ++Y+ HD YY+D SHLP+++R + NFDHPDALET L+ QHL  L+AG  VEVP YDF  H+R + T R EPRRV++VEGILIF D  LRD +DVKI+VDT  DIRFIRR++RD+ ER RT+  V+ QYL+TVRPMH  +V+PS+
Sbjct:    4 STREPIIIGVAGGTGSGKTTVSQAILDRVGRDRIAYIQHDSYYKDRSHLPLEERAKINFDHPDALETELLVQHLTELRAGRPVEVPVYDFTTHTRISQTQRVEPRRVVLVEGILIFADDALRDMMDVKIYVDTDADIRFIRRLERDITERGRTMRSVIDQYLSTVRPMHLEFVEPSK 180
[Close]
BLAST of mRNA_D-dichotoma_M_contig925.19987.1 vs. uniprot
Match: A0A3M1BL86_9CHLR (Uridine kinase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A3M1BL86_9CHLR)

HSP 1 Score: 224 bits (571), Expect = 1.030e-71
Identity = 103/177 (58.19%), Postives = 141/177 (79.66%), Query Frame = 1 
Query:    4 TVNKPIVLGIAGGSGSGKTTLSRAVIKEIGAENVSYLCHDCYYRDLSHLPMDKRGETNFDHPDALETSLMAQHLARLKAGFTVEVPTYDFKVHSRKAATIRTEPRRVIIVEGILIFCDPCLRDKLDVKIFVDTVGDIRFIRRMKRDLAERNRTVDEVVGQYLATVRPMHELYVQPSQ 534
            T  +PIV+GIAGGSGSGKTT++R++++ +G ++++YL HD YY+DLSHLP ++R + NFDHPD+L+T L+ QH+ +L+ G  VEVP YDF  HSR A + R EP++VI+VEGILIF +  LR   DVKIFVDT  D+RFIRR++RD+ ER RT+D V+ QYL+TVRPMH  +V+PS+
Sbjct:    3 TTYRPIVIGIAGGSGSGKTTVARSILERVGEKHIAYLPHDAYYKDLSHLPENQRAQINFDHPDSLDTPLLIQHIKQLQRGQPVEVPVYDFTTHSRTAQSTRVEPQKVILVEGILIFAEAALRQLFDVKIFVDTDADLRFIRRLQRDIHERGRTLDNVIHQYLSTVRPMHLEFVEPSK 179
[Close]
BLAST of mRNA_D-dichotoma_M_contig925.19987.1 vs. uniprot
Match: A0A7C5EPG3_9CHLR (Uridine kinase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C5EPG3_9CHLR)

HSP 1 Score: 223 bits (569), Expect = 2.290e-71
Identity = 103/174 (59.20%), Postives = 136/174 (78.16%), Query Frame = 1 
Query:   13 KPIVLGIAGGSGSGKTTLSRAVIKEIGAENVSYLCHDCYYRDLSHLPMDKRGETNFDHPDALETSLMAQHLARLKAGFTVEVPTYDFKVHSRKAATIRTEPRRVIIVEGILIFCDPCLRDKLDVKIFVDTVGDIRFIRRMKRDLAERNRTVDEVVGQYLATVRPMHELYVQPSQ 534
            KPI++G+AGG+GSGKTT+++A+++ +G + ++Y+ HD YYRDLSHLP+++R   NFDHPDALE  L+ QHL +L AG   EVP YDF  H+R+  T    P RVI+VEGILIF D  LRD +DVKIFVDT  DIRFIRR++RD+AER RT++ V+ QYL TVRPMH  +V+PS+
Sbjct:    2 KPIIVGVAGGTGSGKTTVAQAILERVGRDRIAYIQHDSYYRDLSHLPLEERARVNFDHPDALENELLVQHLRQLCAGRPAEVPIYDFTTHTRRPETRTVYPHRVILVEGILIFADKTLRDMMDVKIFVDTDADIRFIRRLQRDIAERGRTMESVIRQYLETVRPMHLEFVEPSK 175
[Close]
BLAST of mRNA_D-dichotoma_M_contig925.19987.1 vs. uniprot
Match: A0A3C0ZYX0_9CHLR (Uridine kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3C0ZYX0_9CHLR)

HSP 1 Score: 223 bits (567), Expect = 3.790e-71
Identity = 101/174 (58.05%), Postives = 137/174 (78.74%), Query Frame = 1 
Query:   13 KPIVLGIAGGSGSGKTTLSRAVIKEIGAENVSYLCHDCYYRDLSHLPMDKRGETNFDHPDALETSLMAQHLARLKAGFTVEVPTYDFKVHSRKAATIRTEPRRVIIVEGILIFCDPCLRDKLDVKIFVDTVGDIRFIRRMKRDLAERNRTVDEVVGQYLATVRPMHELYVQPSQ 534
            KPI++G+AGG+GSGKTT+S A+++ +G E ++Y+ HD YY+DLSHLP+++R   NFDHPDAL+T+L+ +HL RL+ G  VEVP YDF  H+R+  T R E R V +VEGILIF D  LR+ +D+KIFVDT  DIRFIRR++RD+ ER RT++ V+ QYL TVRPMH  +V+PS+
Sbjct:    2 KPIIIGVAGGTGSGKTTVSEAILERVGRERITYIQHDSYYKDLSHLPLEERHRINFDHPDALDTNLLVEHLERLQTGSPVEVPIYDFTTHTRRRETRRVESRGVTLVEGILIFTDKALRELMDIKIFVDTDADIRFIRRLQRDITERGRTMESVIRQYLGTVRPMHLEFVEPSK 175
[Close]
BLAST of mRNA_D-dichotoma_M_contig925.19987.1 vs. uniprot
Match: A0A497A3L3_9CHLR (Uridine kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A497A3L3_9CHLR)

HSP 1 Score: 222 bits (565), Expect = 6.910e-71
Identity = 101/173 (58.38%), Postives = 136/173 (78.61%), Query Frame = 1 
Query:   16 PIVLGIAGGSGSGKTTLSRAVIKEIGAENVSYLCHDCYYRDLSHLPMDKRGETNFDHPDALETSLMAQHLARLKAGFTVEVPTYDFKVHSRKAATIRTEPRRVIIVEGILIFCDPCLRDKLDVKIFVDTVGDIRFIRRMKRDLAERNRTVDEVVGQYLATVRPMHELYVQPSQ 534
            PIV+G+ GG+GSGKTT+ + +++ +GAE ++Y+ HD YYRD SHLP+++R   N+DHPD+LET L+ +H+ +L  G  VEVP YDF  H+R   T R EPRRVI+VEGILIF +P LRD +DVKI+VDT  DIRFIRR++RD+AER RT++ V+ QYL TVRPMH  +V+PS+
Sbjct:    3 PIVIGVCGGTGSGKTTVVQVILERVGAERIAYIQHDSYYRDQSHLPLEERARVNYDHPDSLETELLVKHVRQLLDGQMVEVPIYDFTTHTRTKRTHRVEPRRVILVEGILIFAEPALRDLMDVKIYVDTDADIRFIRRLQRDIAERGRTMESVIEQYLTTVRPMHLEFVEPSK 175
[Close]
BLAST of mRNA_D-dichotoma_M_contig925.19987.1 vs. uniprot
Match: A0A524A862_9CHLR (Uridine kinase n=1 Tax=Anaerolineales bacterium TaxID=2073117 RepID=A0A524A862_9CHLR)

HSP 1 Score: 222 bits (565), Expect = 9.570e-71
Identity = 102/177 (57.63%), Postives = 136/177 (76.84%), Query Frame = 1 
Query:    4 TVNKPIVLGIAGGSGSGKTTLSRAVIKEIGAENVSYLCHDCYYRDLSHLPMDKRGETNFDHPDALETSLMAQHLARLKAGFTVEVPTYDFKVHSRKAATIRTEPRRVIIVEGILIFCDPCLRDKLDVKIFVDTVGDIRFIRRMKRDLAERNRTVDEVVGQYLATVRPMHELYVQPSQ 534
            +  KPI++G+AGG+GSGKTT+S+A++  +G + ++Y+ HD YY+D SHLP ++R + NFDHPDALET  + QHL  LK G  VEVP YDF +H+R + T   EP RVI+VEGILIF D  LRD +DVKI+VDT  DIRFIRR++RD+ ER RT++ V+ QYL TVRPMH  +V+PS+
Sbjct:    4 SARKPIIIGVAGGTGSGKTTVSQAILDRVGRDRIAYIQHDSYYKDRSHLPFEERAKINFDHPDALETEFLVQHLKVLKDGHHVEVPVYDFTIHTRASQTQWVEPCRVILVEGILIFADDALRDMMDVKIYVDTDADIRFIRRLERDITERGRTMNSVIDQYLTTVRPMHLEFVEPSK 180
[Close]
BLAST of mRNA_D-dichotoma_M_contig925.19987.1 vs. uniprot
Match: A0A2U2SPI4_9CHLR (Uridine kinase n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A2U2SPI4_9CHLR)

HSP 1 Score: 221 bits (562), Expect = 2.560e-70
Identity = 98/174 (56.32%), Postives = 139/174 (79.89%), Query Frame = 1 
Query:   13 KPIVLGIAGGSGSGKTTLSRAVIKEIGAENVSYLCHDCYYRDLSHLPMDKRGETNFDHPDALETSLMAQHLARLKAGFTVEVPTYDFKVHSRKAATIRTEPRRVIIVEGILIFCDPCLRDKLDVKIFVDTVGDIRFIRRMKRDLAERNRTVDEVVGQYLATVRPMHELYVQPSQ 534
            KPI++G+AGG+ SGK+T++ A+++ +G E+++Y+ HD YYRDLSHLP+++R   NFDHPDALET L+ +HL +L+AG  +EVP YDF  ++R   T R EPRRV++VEGILIF D  LRD +D+K++VDT  D+RFIRR++RD+ ER RT++ V+ QYL TVRPMH  +V+PS+
Sbjct:    4 KPIIIGVAGGTASGKSTVAEAILQRVGREHIAYIQHDSYYRDLSHLPLEERARMNFDHPDALETELLVEHLRQLQAGQPIEVPIYDFATYTRTGRTRRIEPRRVVLVEGILIFVDKQLRDMMDIKLYVDTDADMRFIRRLQRDIRERGRTLESVIHQYLETVRPMHLEFVEPSK 177
[Close]
BLAST of mRNA_D-dichotoma_M_contig925.19987.1 vs. uniprot
Match: A0A0M9UD04_9CHLR (Uridine kinase n=4 Tax=Ardenticatenia TaxID=1382928 RepID=A0A0M9UD04_9CHLR)

HSP 1 Score: 221 bits (563), Expect = 2.660e-70
Identity = 102/174 (58.62%), Postives = 133/174 (76.44%), Query Frame = 1 
Query:   13 KPIVLGIAGGSGSGKTTLSRAVIKEIGAENVSYLCHDCYYRDLSHLPMDKRGETNFDHPDALETSLMAQHLARLKAGFTVEVPTYDFKVHSRKAATIRTEPRRVIIVEGILIFCDPCLRDKLDVKIFVDTVGDIRFIRRMKRDLAERNRTVDEVVGQYLATVRPMHELYVQPSQ 534
            +P+++G+AGGSGSGKTT+SRA+++ +G E ++Y+ HD YYRD+SHLP  +R   N+DHPD+LET L+  HL  L+AG  VE+P YDF  H+R   T R EPR VI+VEGIL+F +P LR   DVKIFVDT  DIRFIRR++RD  ER R+V  V+ QYL TVRPMHE +V+PS+
Sbjct:   11 RPVIVGVAGGSGSGKTTVSRAILERVGPERIAYIQHDSYYRDMSHLPPHERARINYDHPDSLETGLLVAHLRMLQAGQPVEIPVYDFATHARLPETRRVEPRPVILVEGILVFAEPELRSLFDVKIFVDTDADIRFIRRLERDTRERGRSVQSVIEQYLTTVRPMHEEFVEPSK 184
[Close]
BLAST of mRNA_D-dichotoma_M_contig925.19987.1 vs. uniprot
Match: A0A7C0TUY4_9CHLR (Uridine kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C0TUY4_9CHLR)

HSP 1 Score: 220 bits (561), Expect = 3.880e-70
Identity = 98/174 (56.32%), Postives = 135/174 (77.59%), Query Frame = 1 
Query:   13 KPIVLGIAGGSGSGKTTLSRAVIKEIGAENVSYLCHDCYYRDLSHLPMDKRGETNFDHPDALETSLMAQHLARLKAGFTVEVPTYDFKVHSRKAATIRTEPRRVIIVEGILIFCDPCLRDKLDVKIFVDTVGDIRFIRRMKRDLAERNRTVDEVVGQYLATVRPMHELYVQPSQ 534
            +PI++G+AGG+GSGKTT++R ++  +GAE+++Y+ HD YYRD SHLPM++R + N+DHPD+LET L+ +HL  L+AG  VE+P YDF  HSR   T R EP  V++VEGIL+F +P LRD  DVK++VDT  D+RFIRR++RD+ ER R+V  V  QYL TVRPMH  +V+PS+
Sbjct:    3 RPIIIGVAGGTGSGKTTVAREILTRVGAEHIAYIPHDAYYRDHSHLPMEERSKVNYDHPDSLETELLVEHLKALRAGQAVEIPVYDFTTHSRTQQTRRIEPASVVLVEGILVFAEPALRDLFDVKLYVDTDADVRFIRRLQRDIEERGRSVRSVCEQYLTTVRPMHLEFVEPSK 176
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig925.19987.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMA0_ECTSI4.720e-8172.00Uridine kinase n=2 Tax=Ectocarpus TaxID=2879 RepID... [more]
A0A7C7UZ41_9CHLR3.910e-7358.19Uridine kinase n=1 Tax=Anaerolineae bacterium TaxI... [more]
A0A3M1BL86_9CHLR1.030e-7158.19Uridine kinase n=1 Tax=Anaerolineae bacterium TaxI... [more]
A0A7C5EPG3_9CHLR2.290e-7159.20Uridine kinase n=1 Tax=Anaerolineae bacterium TaxI... [more]
A0A3C0ZYX0_9CHLR3.790e-7158.05Uridine kinase n=1 Tax=Chloroflexi bacterium TaxID... [more]
A0A497A3L3_9CHLR6.910e-7158.38Uridine kinase n=1 Tax=Chloroflexi bacterium TaxID... [more]
A0A524A862_9CHLR9.570e-7157.63Uridine kinase n=1 Tax=Anaerolineales bacterium Ta... [more]
A0A2U2SPI4_9CHLR2.560e-7056.32Uridine kinase n=2 Tax=Chloroflexi TaxID=200795 Re... [more]
A0A0M9UD04_9CHLR2.660e-7058.62Uridine kinase n=4 Tax=Ardenticatenia TaxID=138292... [more]
A0A7C0TUY4_9CHLR3.880e-7056.32Uridine kinase n=1 Tax=Chloroflexi bacterium TaxID... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig925contigD-dichotoma_M_contig925:230426..237579 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score248.8
Seed ortholog evalue1.9e-63
Seed eggNOG ortholog2880.D7FMA0
KEGG rclassRC00002,RC00017
KEGG koko:K00876
KEGG ReactionR00513,R00516,R00517,R00962,R00964,R00967,R00968,R00970,R01548,R01549,R01880,R02091,R02096,R02097,R02327,R02332,R02371,R02372,R08232
KEGG Pathwayko00240,ko00983,ko01100,map00240,map00983,map01100
EggNOG free text desc.UMP salvage
EggNOG OGsCOG0572@1,KOG4203@2759
EC2.7.1.48
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionUridine kinase like
Ec32 orthologEc-17_003720.1
Exons3
Model size534
Cds size534
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig925.19987.1prot_D-dichotoma_M_contig925.19987.1Dictyota dichotoma ODC1387m malepolypeptideD-dichotoma_M_contig925 230426..237579 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931159.864394-CDS-D-dichotoma_M_contig925:230425..2305571622931159.864394-CDS-D-dichotoma_M_contig925:230425..230557Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig925 230426..230557 -
1690799642.1850517-CDS-D-dichotoma_M_contig925:230425..2305571690799642.1850517-CDS-D-dichotoma_M_contig925:230425..230557Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig925 230426..230557 -
1622931159.883023-CDS-D-dichotoma_M_contig925:236810..2369071622931159.883023-CDS-D-dichotoma_M_contig925:236810..236907Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig925 236811..236907 -
1690799642.200525-CDS-D-dichotoma_M_contig925:236810..2369071690799642.200525-CDS-D-dichotoma_M_contig925:236810..236907Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig925 236811..236907 -
1622931159.8971894-CDS-D-dichotoma_M_contig925:237274..2375791622931159.8971894-CDS-D-dichotoma_M_contig925:237274..237579Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig925 237275..237579 -
1690799642.210748-CDS-D-dichotoma_M_contig925:237274..2375791690799642.210748-CDS-D-dichotoma_M_contig925:237274..237579Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig925 237275..237579 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dichotoma_M_contig925.19987.1

>prot_D-dichotoma_M_contig925.19987.1 ID=prot_D-dichotoma_M_contig925.19987.1|Name=mRNA_D-dichotoma_M_contig925.19987.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=178bp
MTVNKPIVLGIAGGSGSGKTTLSRAVIKEIGAENVSYLCHDCYYRDLSHL
PMDKRGETNFDHPDALETSLMAQHLARLKAGFTVEVPTYDFKVHSRKAAT
IRTEPRRVIIVEGILIFCDPCLRDKLDVKIFVDTVGDIRFIRRMKRDLAE
RNRTVDEVVGQYLATVRPMHELYVQPSQ
back to top

mRNA from alignment at D-dichotoma_M_contig925:230426..237579-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dichotoma_M_contig925.19987.1 ID=mRNA_D-dichotoma_M_contig925.19987.1|Name=mRNA_D-dichotoma_M_contig925.19987.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=7154bp|location=Sequence derived from alignment at D-dichotoma_M_contig925:230426..237579- (Dictyota dichotoma ODC1387m male)
ATGACTGTTAACAAGCCAATTGTATTGGGGATAGCAGGAGGCTCCGGATC
AGGGAAGACCACGTTGTCACGAGCAGTCATTAAAGAAATTGGAGCTGAGA
ACGTCTCTTATCTATGCCATGACTGCTATTATCGGGACCTGTCACATCTT
CCTATGGACAAACGAGGTGAAACGAACTTCGATCATCCCGATGCGTTGGA
GACGTCCTTGATGGCTCAGCACCTTGCTAGACTCAAGGCAGGCTTCACGG
TCGAAGTTCCAACCTATGACTTCAAGGTGCACTCGCGAAAGGCGGCGACT
ATCAGGTGACCAACTGCACGTTACTCTACCACATGACTTCGGGTCATGGC
TCCATGTCGAAGAGCTTTTGTGATGGACAATGACTGGGGTTTTAGTGAGG
CATCGTCCATCCGAAGTGGACAATCTTTCGTGTGCGAACATATCAGGCAA
CGTGCCCAACTTATCGCCATCTTGACCTACAATATAGCCGTCCATACCAG
ATGTAAAATGACTGCGACATGACTGGAGCAGAGTGAGAATAGACTGGAAA
ATTTTGTTGCGAGTTGAAGTGCGGAACCTCGGCTCAGCATGTCTCCAGGA
CGCGTGAAAGTTAGATCACTTCCCTCTACATGAAGCGATGTGCTCGTCGT
GCCAACCGTTCTTTCGTGACAGGACGGAGCCCAGGAGGGTGATTATTGTG
GAAGGCATTTTAATTTTCTGTGATCCGTGCCTGAGGGATAAGCTAGACGT
GAAGATATTTGTCGATACGGTGAGTCAAGAGCATTTGAGCGGCGAGTAGA
GGTCCATTTGGGACTCCTCACAAGGGAAGCTTGAGGATCGATGTTCGCAC
TCCATCAGGCAAAGAATTGGGATCCCTAGATATAGAAGAGTCTGGAAATG
AGACTCTTCGACACTTAGGTCTTGCAAACTAGCTTCAGTGCTCCATCCAT
ATTTTCAGTACAGCATGTACTATCGAAATGACTACACACCCTCGAAGCAC
AGTGTGATCCCAAATGGCCTCTTCCTGAAAAAATACATCAGGATGTCCAA
GACTCATCAAATCAAGTAGGCGAGACAAGGAGGTTTTTCGATGAGTAGTC
AGACGGAAGCATCCCCTCCCTCCTGCCAAGTTGACAGGAAATACTTCGAC
ATCCCGCTGTATCTCTTGTTCAACCTCTGAGCCGTGTTTCTCTGGCAATA
ACTGCGGTTACGATTGCCCTGTCTTGAAAGTACAGCACGAGTCGAAGTGG
CCATCCTTGTTCAAAGATGGTGCTTCTTATTATTCAACGCCGCCCCCGTT
TTAGCATGGCATATTCGGTCGGGTTGGTATCATAGGAGGGAACACGCCCC
CCCCTCCAGGGTTCCAGTGGTATTTGGTGACCCACTACACGACATGAGAA
GATATTTAGATGAGCAGCTACCGTTGATATGAATTCATTGTGGAATAAAA
GTTCAAGGAAATACAAGCGCGCAATCCAAAATGTTGTGCGACGTGGGACA
TGACGTCCATGCATCCCATGCTCCCCTTGATGGCCGCATGGTCAACCCAA
TTACCAGTACAGTACAGTACAGTCGAACCTCCAGATTAAGGCACCCCCAA
GGGTCTTACGGGCCCGAGGAATTTCAGCTCCCCCTAGGTTTCGATGATAC
AGAAATTCATGACATAATATGAACATTAGTGGTATACCTGTGCGGCAAGA
AGATCGCACTATACAGAGACATAGGATATGTGGTAGTTTGCTGTATTTCA
TTCCGAAATTATTTGGCCATTCCTTGGCTAGATTAAGGCACCTTCTAGAT
TAAGGCTCGTCCCATGGGTGTCTTAATCTGGAGGTTCGACTGTACTGCAT
TTCCGTTTGAATCAAATCCTAACTCCCCGATTCTAGCCAGACTCACGCGT
ACGCCAAGAGGGGAAGCACAGAACACATTCCTCACTATACAGAGACATAG
GATATGTGGTAGTTTGCTGTATTTCATTCCGAAATTATTTGGCCATTACT
TGGCTAGATTAAGGCACCTTCTAGATTAAGGCTCGTCCCATGGGTGTCTT
AATCTGGAGGTTCGACTGTACTGCATTTCCGTTTGAATCAAATCCTAACT
CCCCGATTCTCGCCAGACTCACGCGTACGCCAAGAGGGGAAGCACAGAAC
ACATTCCTCGCCAAGGAAAATCAAACATAGCGAAGATCATGGGTTGAGTC
TGATGCCGCTGGAGGTGCTGTAACCTCGCTTGCATCTGTTAGAGTACTTC
GCAATCTAGCCACATAACTGGAAGAGCAGGATGCGCAACGCCTCTCGACG
TTTGCCTTCCTGCCAGAAGTTTGATGTACGTAGAAAATATCATGATTTCA
TGTTACCAATCGTTCTCGCGCACAGACGTCGACATGACGAACGAGTCCAG
CATACCGTGACGATCGAGTGCGAAGTCCTTTGTGATCACGTACACAAGCA
ACATTGGCATGACTGATATCCCGAACAAATGGCGGGTTGAACATTAACGG
TGCAACAGCACTTCACCCTCGCACCCCCGTCGCGAAAAAGCACGGCAAGA
GACAGAGACAAACCTCTTTGCCCGGTAGGCGAGATTACTTCTTTGAAGTG
TGTGGCAGCCTCCCTAGAGGGTCGCAATACGCCGCGGCGAGTGGCGAAGC
TAAAGGTTACGGCTCTGTCCATGTATGGTTTGATCGGCCCTTCCCTTGGT
TGTTTTGGCGCGATCTCTCGCTTTGGCGCGCCAAAATGCATCGTCTTAAA
CTGGGGGAGCCACTGGACAAGTTTGTGAAAGGCCACAGTGGCTGGCCACG
GAGTGGGCCCCCATGACTGCTCAATCATGACTCATCTGATATCTCTGGCT
CTACCAGGTCATCCCTTATTCGAAAACGGGAATGACCAAAACCAGGATCT
GACCAATGCTGCTCATATAGCAAATCTACTCCTGTACTTCAACTGTTACA
TGCTATGCTACGCTATGCTATGCTATGCTAGCTGGACCATACTCTTACGG
ATGGATACAACCATACGAGGTAAAGTTCGACACGCTTAACACTTTCCTGT
GAAATATCGTAGGAGACCGAATCTCCCCTGCGAGAGTACCCCCTTCAAGT
GGAGGATAGAGTTTGGAGGTATCCTTGACGGGACCCACGAGCGGAGAGAA
GCAAGTCACCCATCGGGGCGGTTTGACTCGGGGCTGTCCCGGGGTCCACT
TAGCCTAAGAAACGCCTTGACGATGGCAACAAGGCAAGCCTCCTTGAGGA
GAACAGAGGGCGTGGGTGCGTCCTGCCAGTCGCACCTCGCGCTGTGGGAG
CCAGAATCGCATCAATGATGTCACCGCGACGCCTCGGACGCTTCTTGCAA
CGTTCGGAGGCGAGCGTCTAGCGACCGCAGGCCGGGGGCATCTTTGCTGC
TTGCTCTCTTTGCAGCGGTTGTTGTTGTTGATGTTGTGTCATGGAATCTT
TGCCCTCGGAGAATCTAGAAGTCCGAAGCGATAGTCTTGTTTCCGGCTCA
TAGACCTTGGCTCTGAAGTGTTGGTGATGAAGCGTTGACACTGGGTGGAC
TCGAGCGTAATGTTCGGCGACTCCCGAGAAACGAACAGATCGGATACTGA
CCAGGGTAGGGGAATCAGCAGATGCCACCCCGGAGAGTCGCTCACTCCAA
GCATGAGCCAGACGACATGATATCGAAACGAGGCGTGGATTACTGCATTA
CGGCGCCCGTGGCCAGAAGATGTGGCGAAGTCCTTGCCCGTGGGCTGAGC
TTCCGACTTCCTGGGGAGACTGACCACAAACAAGTCCAGGAGAAGGTCGA
AAGTGGATGGTCGAAGGTCTAGCTAGAGGAAGGAACGATTTTGCGGCGGT
TTTTGTTGCACAGTGTTATCTGTCTCGCATAAGAGGGGTACTAAGGAGAC
TGCGTTTCGCAGGCATCCCTTGTATCGTCATGCATGTGAGGCTTTCGAAG
TGGAATGCCAGGTGTCCTGCTTTCCATAGCGTGTAGTGGGGGTCAATGGG
TGAGGGGGAGGAAGAAGCAAAGGAGATGCGGACACAAGGGGAGCGATTCA
GCTTGTTGGGGAAACATAAAACGAATTTGATTTTGTCGAAGTTACCTGTC
CTGACGATATCTGTCCTGACCTTCAGCAAAGATGGCAGGATGACGATGCA
GTACTTCGTATGTCTCAAAAGATTTGGATAGTCTTAAATTTTTTATGTGA
AAAGACAGTGACCTACGAAGGTACAGGCAGTCGTGCAATGGCAAATCTCG
GTACCAGGAGAATTTTTGGCGACTGGGAATACTTGGGATGGAGTCCACGG
TTGGATGGAAAGTTGGAGAGGTTCTGAGGAGTGCCCCAAATAGCCAGCAT
GGTCTGAATACCCTCCAGGTCACGTACCATGGACTTCAACAAAAGTCAAC
AGCGCAGTGGGCATACCTCAGAACACTACTTGCGGTTGAGATGAAAGCTG
CGCGTTGCGGCCCACGGGCGAGCGAAGGTGGTTTACTGTAGTAAGATGAC
TTGTCTCCTGTACAAGCGAGGTGCACGAATAGCAGTTGCAGTTGTGCTTG
TTGTTCTTGTTGTTCTTGTTGTTCTTGTTCTTGTTCTTGTTGTTCTTGTT
GTTCTTGTTGTTCTTGTTGTTCTTGTTGTTCTTGTTCTTGTTCTTGTTGT
TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG
TTGTTGTTGTTGTTGCTGTTGCTGTTGCTGCTGTTGCTGCTGTTGCTGCT
GTTGCTGCTGTTGCTGCTGTTGCTGTTGTTGTTGTTGTTGTGTTGTTGTT
GTTGTTGTTTCCGCTCCATTAGAGTACCAGCTGGGCCAGCCAAGCAAGAT
ACGTCTTGTTTTTCCCTCATGAAGCATTCAATCGTAGAGGTTATGCCATG
GAAATTCGGCACCGTATTTCTTGCATGAAGACCAGCACATTCAGGAGCTC
TCTTTTGGGTTTTTGGTGAGTTTAAGTGAATTCGACGATTGAAACGAGAT
TATGGTGTAGACAGGGAGGGATCAGTGTTAGCGAAAATCGGAAATATCAA
GAAAAACGAAGGACTCTCACGTTGTTTTGATGCGTATTTGCGTTGGGCTG
GGTGTGCAAGATTTGATTTTTACTCCGATGTCAAAGATTCGGGGACTGCA
TGGCGTGATTGGCTTCCCGATCCGGGACTAGACTGAATTCAAACGTCAAT
TCGAACATAGCATTTTTTTAAACGACAGTGGATTACCCACGAAACCGACG
ATCGATCATCGCCTGGATTCAGTTGTCGACTTGCCAGTAAGATCCACTAA
TTGTCCCAAACGATCATGTCAAAGGTTGGACGACTGGGTCAGGTGTAGCG
TGATGAACTAACTCTCAAGCTGGAAAATAAATGAAATTCAAGTAGTCAGT
AATAGGGTAATTAATGCCTGACAAGTTTACCGAGGTTAGGGTTCGATTGT
CTTACCTATATTCGTTGCAAAAGTATCACACCCGAACTTTCGAGTCAAAA
CTCGAAGCATTGAGACAGTTATTGTAGAGCGTGACCATCCCCGAAACCCG
CAACTGCACGAAATTCAAGTATAGATACCATATACATCTTCGTTGCCTAT
GTCGTGCTGAAAAAGTCCATGGAGAATGCCACTTTACTTCATTCTCATCG
CCCAAAGACATTATCCAAATCTGGTTCAAGCGCGGCCCAATTCCATGTTC
GCCCAGGACTTTTGCCTTTCTGGCAACATATGTTGGGGGGGGGTTCTATT
GGAAAGTCATGGATATAGGGGGCAGAGAAGAGTATGAGGTGATTGCAGCG
ATTATTTGTGCCCGTTCCAGCTCCCTGTTGGTCTTGAGATGTACTCGCTA
CAAACATCGACGCTGCTAGTCACCAGGCTGGCCCACCCGGTAGCTTGGGT
AGGGATTGATGTGTGCCAGCACTGAAGGAAATAACGATCGTCTGCCGAGC
GTGTTTATTTGGATAGCATGAAGACGTGCTCGCGTGCTCGGAAGATATTC
TACGCAAGTTACTGTATTCGAGAGTGCTCAGCACAGCACGTCAACTCGGG
GCAAAAGAGATTACGAAGACAGTGAACGATAGTGAATGATAGTGAAGATC
ATGAAAAGGTCATCTCTCTATCTATCTATCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCGGA
CGATGCTAGTTTCGGGGAAAATCATGGAATTGTCGGGATGATGGATTTGT
GACTTGTGTATCTTCATAGATTTTCCCTCATTCAGGCCGTGTCTCTTCTC
AACGAGCAAACTTGAATGGGCGCGACTTGGGTTGGGGACGGACGGCGAAT
CAAGAGCCAACGATAATCTCTATACTTCCCGAGCATCTTGACAAGCTCTA
TATACACATAAACCGTAATTGTTGAGAAGTTAGCTCTTCATGAAGGGCAA
CGAGTTACTCGCGTATTGTCGGCTATTCTTCCAGGTCCAAAGTCGCCGTG
GTCCATTTCCGCTCGTTTCGACACAAGATCTTATGTAGGGCTGGGTGACT
CATTCCCGCGACGAAAGTGAAGCAGTTTACCGCCACGGGTGAGCTTGATC
TCGACCGAAGCATGGAGGGCCCAGGTATTGCGTTACCTGTCCTGTGAAGT
TGAGTGGCTCTCTGTCTCCCACCTCCCGGTGATAGGACCCGCGCTGAGTC
CTCGTGGACCACTTGCACTCCTCAAAAAATCTTAATTCGTAGGCACTTGC
CATTCAGCGACTGGCGATAGGGATACGGGTAGCGAGCTGTTAAGCTCAGC
TTCTCGATTCGACCGACCAGGTTAGGTGCTGACGCCAGTGGCTGTTTGCC
TGTGCCTGGAGTTTGCTCCCTTTGACATCTCTCTTCAGTTGCAAACTTGA
CTTGAATTGCGTGGTGTGCTTCATCTCAGCCATTTGACGCCTGATTGGGT
TTCCCGTGCCTTATCCCTGCATGTTTTGGGGGGTCTTCGGTGGTGCACGG
CATGGCATGCCACGCCTCGCAGGTTGGGGACATTCGGTTCATTCGTCGAA
TGAAGAGGGATCTTGCCGAGCGAAATCGAACGGTGGACGAGGTCGTGGGA
CAGTATCTCGCAACAGTGAGACCCATGCATGAACTGTACGTGCAGCCCTC
CCAG
back to top

Coding sequence (CDS) from alignment at D-dichotoma_M_contig925:230426..237579-

>mRNA_D-dichotoma_M_contig925.19987.1 ID=mRNA_D-dichotoma_M_contig925.19987.1|Name=mRNA_D-dichotoma_M_contig925.19987.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=1068bp|location=Sequence derived from alignment at D-dichotoma_M_contig925:230426..237579- (Dictyota dichotoma ODC1387m male)
ATGACTGTTAACAAGCCAATTGTATTGGGGATAGCAGGAGGCTCCGGATC
AGGGAAGACCACGTTGTCACGAGCAGTCATTAAAGAAATTGGAGCTGAGA
ACGTCTCTTATCTATGCCATGACTGCTATTATCGGGACCTGTCACATCTT
CCTATGGACAAACGAGGTGAAACGAACTTCGATCATCCCGATGCGTTGGA
GACGTCCTTGATGGCTCAGCACCTTGCTAGACTCAAGGCAGGCTTCACGG
TCGAAGTTCCAACCTATGACTTCAAGGTGCACTCGCGAAAGGCGGCGACT
ATCAGATGACTGTTAACAAGCCAATTGTATTGGGGATAGCAGGAGGCTCC
GGATCAGGGAAGACCACGTTGTCACGAGCAGTCATTAAAGAAATTGGAGC
TGAGAACGTCTCTTATCTATGCCATGACTGCTATTATCGGGACCTGTCAC
ATCTTCCTATGGACAAACGAGGTGAAACGAACTTCGATCATCCCGATGCG
TTGGAGACGTCCTTGATGGCTCAGCACCTTGCTAGACTCAAGGCAGGCTT
CACGGTCGAAGTTCCAACCTATGACTTCAAGGTGCACTCGCGAAAGGCGG
CGACTATCAGGACGGAGCCCAGGAGGGTGATTATTGTGGAAGGCATTTTA
ATTTTCTGTGATCCGTGCCTGAGGGATAAGCTAGACGTGAAGATATTTGT
CGATACGGACGGAGCCCAGGAGGGTGATTATTGTGGAAGGCATTTTAATT
TTCTGTGATCCGTGCCTGAGGGATAAGCTAGACGTGAAGATATTTGTCGA
TACGGTTGGGGACATTCGGTTCATTCGTCGAATGAAGAGGGATCTTGCCG
AGCGAAATCGAACGGTGGACGAGGTCGTGGGACAGTATCTCGCAACAGTG
AGACCCATGCATGAACTGTACGTGCAGCCCTCCCAGGTTGGGGACATTCG
GTTCATTCGTCGAATGAAGAGGGATCTTGCCGAGCGAAATCGAACGGTGG
ACGAGGTCGTGGGACAGTATCTCGCAACAGTGAGACCCATGCATGAACTG
TACGTGCAGCCCTCCCAG
back to top