mRNA_D-dichotoma_M_contig925.19986.1 (mRNA) Dictyota dichotoma ODC1387m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dichotoma_M_contig925.19986.1
Unique NamemRNA_D-dichotoma_M_contig925.19986.1
TypemRNA
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig925.19986.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig925contigD-dichotoma_M_contig925:224740..225936 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size1197
Cds size1197
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931159.6077645-CDS-D-dichotoma_M_contig925:224739..2259361622931159.6077645-CDS-D-dichotoma_M_contig925:224739..225936Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig925 224740..225936 +
1690799642.0297225-CDS-D-dichotoma_M_contig925:224739..2259361690799642.0297225-CDS-D-dichotoma_M_contig925:224739..225936Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig925 224740..225936 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig925.19986.1prot_D-dichotoma_M_contig925.19986.1Dictyota dichotoma ODC1387m malepolypeptideD-dichotoma_M_contig925 224740..225936 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dichotoma_M_contig925.19986.1

>prot_D-dichotoma_M_contig925.19986.1 ID=prot_D-dichotoma_M_contig925.19986.1|Name=mRNA_D-dichotoma_M_contig925.19986.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=399bp
MAPPIETETFESKAFSVENLAGQGGDGLERAVDLPIQAKDTPAVMEEDKV
PGTAVATAVDDVAIPQVAGESMDTEEVSVTAVATTVDGVALPQVAGESMD
TEEVSVITVATESMDAEQACATTVAITTLDKNVTPLTAGESTDAEEVPST
TIAPTTGDTAISHVEGDAVDAKEIPGTTVGIILDEMVKPQTASKAMDADK
VPVTTVTSTVGDIAVPQVASEAMDAEEVPGTAVDTAVDDVTMPQIGGGLK
NSVNDGPLGPKAMVNESAVVESPLGDVEIATPLAMEVVLEPAAATSDSCV
VPADEVMSTRDTFTCSTGAPAEDVPNDALTYSRGHHTTGTGIFGESPVAA
VDGSVIASGPTNEYAMEAAGTRRLGDYGSNEGGGDGNASVEDVKMLHDD
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mRNA from alignment at D-dichotoma_M_contig925:224740..225936+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dichotoma_M_contig925.19986.1 ID=mRNA_D-dichotoma_M_contig925.19986.1|Name=mRNA_D-dichotoma_M_contig925.19986.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=1197bp|location=Sequence derived from alignment at D-dichotoma_M_contig925:224740..225936+ (Dictyota dichotoma ODC1387m male)
ATGGCTCCACCGATTGAAACCGAAACGTTCGAGAGCAAGGCCTTTTCGGT
CGAAAACTTAGCAGGGCAGGGCGGAGACGGCCTGGAGCGGGCGGTCGATT
TACCTATCCAAGCGAAGGACACGCCCGCTGTAATGGAAGAAGACAAAGTT
CCCGGCACTGCCGTTGCGACCGCCGTTGATGACGTTGCAATACCCCAGGT
CGCAGGCGAGTCGATGGATACGGAGGAAGTCTCCGTCACCGCCGTTGCGA
CCACCGTTGACGGCGTTGCTTTACCTCAAGTCGCAGGCGAGTCGATGGAT
ACGGAGGAAGTCTCCGTCATCACCGTCGCCACCGAGTCTATGGACGCGGA
GCAAGCCTGCGCAACCACTGTTGCTATCACCACCCTTGACAAAAACGTAA
CGCCTCTAACCGCAGGCGAGTCGACTGACGCAGAGGAAGTCCCTAGCACC
ACCATTGCCCCCACGACTGGAGACACTGCGATCTCCCACGTCGAAGGGGA
CGCTGTGGACGCGAAGGAAATCCCCGGCACCACCGTTGGCATCATCCTCG
ACGAAATGGTTAAACCTCAAACAGCAAGCAAGGCGATGGACGCGGACAAA
GTCCCCGTCACCACCGTTACGTCTACCGTTGGCGACATTGCGGTACCTCA
AGTTGCAAGCGAGGCGATGGACGCCGAGGAAGTCCCTGGCACCGCCGTCG
ATACGGCTGTTGATGACGTCACCATGCCCCAGATCGGAGGAGGGTTGAAG
AATAGCGTCAACGATGGGCCCCTTGGGCCGAAAGCAATGGTCAATGAGAG
TGCGGTTGTTGAATCCCCTCTCGGGGACGTTGAAATTGCCACGCCCTTGG
CGATGGAGGTTGTCCTCGAACCTGCTGCGGCCACCAGTGATTCGTGCGTA
GTTCCAGCGGATGAGGTGATGTCGACCAGAGACACGTTCACTTGCAGCAC
CGGCGCTCCGGCCGAAGACGTTCCAAACGATGCCTTGACGTACAGCCGTG
GACATCATACTACTGGTACAGGGATTTTTGGAGAGTCACCTGTCGCAGCA
GTAGACGGTTCCGTTATAGCTTCTGGTCCAACAAACGAGTACGCAATGGA
AGCAGCAGGTACCAGACGATTGGGAGATTACGGCAGCAACGAAGGCGGAG
GTGATGGGAATGCTTCCGTGGAAGACGTGAAGATGCTCCACGACGAT
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Coding sequence (CDS) from alignment at D-dichotoma_M_contig925:224740..225936+

>mRNA_D-dichotoma_M_contig925.19986.1 ID=mRNA_D-dichotoma_M_contig925.19986.1|Name=mRNA_D-dichotoma_M_contig925.19986.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=2394bp|location=Sequence derived from alignment at D-dichotoma_M_contig925:224740..225936+ (Dictyota dichotoma ODC1387m male)
ATGGCTCCACCGATTGAAACCGAAACGTTCGAGAGCAAGGCCTTTTCGGT
CGAAAACTTAGCAGGGCAGGGCGGAGACGGCCTGGAGCGGGCGGTCGATT
TACCTATCCAAGCGAAGGACACGCCCGCTGTAATGGAAGAAGACAAAGTT
CCCGGCACTGCCGTTGCGACCGCCGTTGATGACGTTGCAATACCCCAGGT
CGCAGGCGAGTCGATGGATACGGAGGAAGTCTCCGTCACCGCCGTTGCGA
CCACCGTTGACGGCGTTGCTTTACCTCAAGTCGCAGGCGAGTCGATGGAT
ACGGAGGAAGTCTCCGTCATCACCGTCGCCACCGAGTCTATGGACGCGGA
GCAAGCCTGCGCAACCACTGTTGCTATCACCACCCTTGACAAAAACGTAA
CGCCTCTAACCGCAGGCGAGTCGACTGACGCAGAGGAAGTCCCTAGCACC
ACCATTGCCCCCACGACTGGAGACACTGCGATCTCCCACGTCGAAGGGGA
CGCTGTGGACGCGAAGGAAATCCCCGGCACCACCGTTGGCATCATCCTCG
ACGAAATGGTTAAACCTCAAACAGCAAGCAAGGCGATGGACGCGGACAAA
GTCCCCGTCACCACCGTTACGTCTACCGTTGGCGACATTGCGGTACCTCA
AGTTGCAAGCGAGGCGATGGACGCCGAGGAAGTCCCTGGCACCGCCGTCG
ATACGGCTGTTGATGACGTCACCATGCCCCAGATCGGAGGAGGGTTGAAG
AATAGCGTCAACGATGGGCCCCTTGGGCCGAAAGCAATGGTCAATGAGAG
TGCGGTTGTTGAATCCCCTCTCGGGGACGTTGAAATTGCCACGCCCTTGG
CGATGGAGGTTGTCCTCGAACCTGCTGCGGCCACCAGTGATTCGTGCGTA
GTTCCAGCGGATGAGGTGATGTCGACCAGAGACACGTTCACTTGCAGCAC
CGGCGCTCCGGCCGAAGACGTTCCAAACGATGCCTTGACGTACAGCCGTG
GACATCATACTACTGGTACAGGGATTTTTGGAGAGTCACCTGTCGCAGCA
GTAGACGGTTCCGTTATAGCTTCTGGTCCAACAAACGAGTACGCAATGGA
AGCAGCAGGTACCAGACGATTGGGAGATTACGGCAGCAACGAAGGCGGAG
GTGATGGGAATGCTTCCGTGGAAGACGTGAAGATGCTCCACGACGATATG
GCTCCACCGATTGAAACCGAAACGTTCGAGAGCAAGGCCTTTTCGGTCGA
AAACTTAGCAGGGCAGGGCGGAGACGGCCTGGAGCGGGCGGTCGATTTAC
CTATCCAAGCGAAGGACACGCCCGCTGTAATGGAAGAAGACAAAGTTCCC
GGCACTGCCGTTGCGACCGCCGTTGATGACGTTGCAATACCCCAGGTCGC
AGGCGAGTCGATGGATACGGAGGAAGTCTCCGTCACCGCCGTTGCGACCA
CCGTTGACGGCGTTGCTTTACCTCAAGTCGCAGGCGAGTCGATGGATACG
GAGGAAGTCTCCGTCATCACCGTCGCCACCGAGTCTATGGACGCGGAGCA
AGCCTGCGCAACCACTGTTGCTATCACCACCCTTGACAAAAACGTAACGC
CTCTAACCGCAGGCGAGTCGACTGACGCAGAGGAAGTCCCTAGCACCACC
ATTGCCCCCACGACTGGAGACACTGCGATCTCCCACGTCGAAGGGGACGC
TGTGGACGCGAAGGAAATCCCCGGCACCACCGTTGGCATCATCCTCGACG
AAATGGTTAAACCTCAAACAGCAAGCAAGGCGATGGACGCGGACAAAGTC
CCCGTCACCACCGTTACGTCTACCGTTGGCGACATTGCGGTACCTCAAGT
TGCAAGCGAGGCGATGGACGCCGAGGAAGTCCCTGGCACCGCCGTCGATA
CGGCTGTTGATGACGTCACCATGCCCCAGATCGGAGGAGGGTTGAAGAAT
AGCGTCAACGATGGGCCCCTTGGGCCGAAAGCAATGGTCAATGAGAGTGC
GGTTGTTGAATCCCCTCTCGGGGACGTTGAAATTGCCACGCCCTTGGCGA
TGGAGGTTGTCCTCGAACCTGCTGCGGCCACCAGTGATTCGTGCGTAGTT
CCAGCGGATGAGGTGATGTCGACCAGAGACACGTTCACTTGCAGCACCGG
CGCTCCGGCCGAAGACGTTCCAAACGATGCCTTGACGTACAGCCGTGGAC
ATCATACTACTGGTACAGGGATTTTTGGAGAGTCACCTGTCGCAGCAGTA
GACGGTTCCGTTATAGCTTCTGGTCCAACAAACGAGTACGCAATGGAAGC
AGCAGGTACCAGACGATTGGGAGATTACGGCAGCAACGAAGGCGGAGGTG
ATGGGAATGCTTCCGTGGAAGACGTGAAGATGCTCCACGACGAT
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