mRNA_D-dichotoma_M_contig925.19985.1 (mRNA) Dictyota dichotoma ODC1387m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dichotoma_M_contig925.19985.1
Unique NamemRNA_D-dichotoma_M_contig925.19985.1
TypemRNA
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig925.19985.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig925contigD-dichotoma_M_contig925:223711..224665 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size957
Cds size954
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931159.5685418-CDS-D-dichotoma_M_contig925:223710..2246641622931159.5685418-CDS-D-dichotoma_M_contig925:223710..224664Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig925 223711..224664 +
1690799642.0158262-CDS-D-dichotoma_M_contig925:223710..2246641690799642.0158262-CDS-D-dichotoma_M_contig925:223710..224664Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig925 223711..224664 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig925.19985.1prot_D-dichotoma_M_contig925.19985.1Dictyota dichotoma ODC1387m malepolypeptideD-dichotoma_M_contig925 223711..224664 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dichotoma_M_contig925.19985.1

>prot_D-dichotoma_M_contig925.19985.1 ID=prot_D-dichotoma_M_contig925.19985.1|Name=mRNA_D-dichotoma_M_contig925.19985.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=318bp
EAYGGDAERSTAVNIEPAAEMKPDETGNVAGESQLAERVLEDEMEVETLD
YLKPAIEAATVSMTEDGVSVVDDGKLMVEGEIAAIAADGRGGDGVEVIAR
EGHEDGAPSEQVPRDWNRPVASTFSMDISAAPSTRETVAAMSEDATASGA
MTGLVNREGFISSVIIAAEERDEPMVDVNAADNTEDDRTLVMGHVGTPSY
EEPVPVDASTAIAFPAGEAESSPSVSFSIGEHTERMIDVDGVEEATPATN
PVVDTSVLLLAEATFATGVECDRSAAVEDDLTKPIIVDSQDEKDSGDDVE
IFEVGDLGAKNMDVIVES
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mRNA from alignment at D-dichotoma_M_contig925:223711..224665+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dichotoma_M_contig925.19985.1 ID=mRNA_D-dichotoma_M_contig925.19985.1|Name=mRNA_D-dichotoma_M_contig925.19985.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=955bp|location=Sequence derived from alignment at D-dichotoma_M_contig925:223711..224665+ (Dictyota dichotoma ODC1387m male)
GAAGCATATGGCGGTGATGCGGAGCGTTCGACCGCGGTAAACATTGAGCC
AGCTGCCGAGATGAAGCCTGATGAGACTGGGAATGTCGCTGGTGAATCTC
AACTGGCTGAGAGGGTTTTGGAAGACGAAATGGAGGTGGAGACGCTCGAC
TATCTGAAGCCGGCAATCGAGGCTGCTACAGTGTCAATGACAGAGGACGG
CGTTTCTGTCGTTGACGACGGAAAACTGATGGTAGAGGGTGAGATCGCGG
CAATCGCGGCAGACGGTAGAGGTGGAGATGGGGTGGAAGTGATAGCCCGG
GAAGGACATGAGGACGGAGCTCCAAGTGAGCAGGTACCAAGGGACTGGAA
TCGTCCTGTTGCTTCAACATTTTCCATGGATATCTCCGCTGCACCGAGTA
CACGGGAAACTGTTGCTGCTATGAGCGAAGACGCTACGGCCTCAGGAGCT
ATGACTGGTCTTGTCAACCGAGAAGGGTTTATCTCCAGCGTAATCATTGC
TGCCGAAGAACGAGATGAGCCCATGGTTGACGTAAACGCCGCGGACAACA
CAGAAGATGACCGAACGCTCGTCATGGGACATGTTGGCACACCGAGTTAC
GAAGAACCCGTACCTGTTGACGCGTCGACGGCGATCGCTTTTCCGGCGGG
TGAGGCAGAGTCGAGCCCGAGCGTCAGTTTCTCGATTGGCGAACATACCG
AACGGATGATAGATGTGGATGGCGTCGAGGAGGCGACACCTGCCACGAAC
CCCGTGGTCGATACCTCAGTGCTGCTGCTCGCCGAGGCCACCTTTGCGAC
TGGAGTTGAATGCGATAGATCTGCGGCGGTAGAGGACGACTTGACGAAGC
CTATTATCGTGGATAGTCAAGACGAGAAGGATTCTGGCGACGACGTTGAG
ATCTTCGAAGTGGGCGATCTCGGCGCAAAAAATATGGACGTAATTGTCGA
ATCAA
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Coding sequence (CDS) from alignment at D-dichotoma_M_contig925:223711..224665+

>mRNA_D-dichotoma_M_contig925.19985.1 ID=mRNA_D-dichotoma_M_contig925.19985.1|Name=mRNA_D-dichotoma_M_contig925.19985.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=1908bp|location=Sequence derived from alignment at D-dichotoma_M_contig925:223711..224665+ (Dictyota dichotoma ODC1387m male)
GAAGCATATGGCGGTGATGCGGAGCGTTCGACCGCGGTAAACATTGAGCC
AGCTGCCGAGATGAAGCCTGATGAGACTGGGAATGTCGCTGGTGAATCTC
AACTGGCTGAGAGGGTTTTGGAAGACGAAATGGAGGTGGAGACGCTCGAC
TATCTGAAGCCGGCAATCGAGGCTGCTACAGTGTCAATGACAGAGGACGG
CGTTTCTGTCGTTGACGACGGAAAACTGATGGTAGAGGGTGAGATCGCGG
CAATCGCGGCAGACGGTAGAGGTGGAGATGGGGTGGAAGTGATAGCCCGG
GAAGGACATGAGGACGGAGCTCCAAGTGAGCAGGTACCAAGGGACTGGAA
TCGTCCTGTTGCTTCAACATTTTCCATGGATATCTCCGCTGCACCGAGTA
CACGGGAAACTGTTGCTGCTATGAGCGAAGACGCTACGGCCTCAGGAGCT
ATGACTGGTCTTGTCAACCGAGAAGGGTTTATCTCCAGCGTAATCATTGC
TGCCGAAGAACGAGATGAGCCCATGGTTGACGTAAACGCCGCGGACAACA
CAGAAGATGACCGAACGCTCGTCATGGGACATGTTGGCACACCGAGTTAC
GAAGAACCCGTACCTGTTGACGCGTCGACGGCGATCGCTTTTCCGGCGGG
TGAGGCAGAGTCGAGCCCGAGCGTCAGTTTCTCGATTGGCGAACATACCG
AACGGATGATAGATGTGGATGGCGTCGAGGAGGCGACACCTGCCACGAAC
CCCGTGGTCGATACCTCAGTGCTGCTGCTCGCCGAGGCCACCTTTGCGAC
TGGAGTTGAATGCGATAGATCTGCGGCGGTAGAGGACGACTTGACGAAGC
CTATTATCGTGGATAGTCAAGACGAGAAGGATTCTGGCGACGACGTTGAG
ATCTTCGAAGTGGGCGATCTCGGCGCAAAAAATATGGACGTAATTGTCGA
ATCAGAAGCATATGGCGGTGATGCGGAGCGTTCGACCGCGGTAAACATTG
AGCCAGCTGCCGAGATGAAGCCTGATGAGACTGGGAATGTCGCTGGTGAA
TCTCAACTGGCTGAGAGGGTTTTGGAAGACGAAATGGAGGTGGAGACGCT
CGACTATCTGAAGCCGGCAATCGAGGCTGCTACAGTGTCAATGACAGAGG
ACGGCGTTTCTGTCGTTGACGACGGAAAACTGATGGTAGAGGGTGAGATC
GCGGCAATCGCGGCAGACGGTAGAGGTGGAGATGGGGTGGAAGTGATAGC
CCGGGAAGGACATGAGGACGGAGCTCCAAGTGAGCAGGTACCAAGGGACT
GGAATCGTCCTGTTGCTTCAACATTTTCCATGGATATCTCCGCTGCACCG
AGTACACGGGAAACTGTTGCTGCTATGAGCGAAGACGCTACGGCCTCAGG
AGCTATGACTGGTCTTGTCAACCGAGAAGGGTTTATCTCCAGCGTAATCA
TTGCTGCCGAAGAACGAGATGAGCCCATGGTTGACGTAAACGCCGCGGAC
AACACAGAAGATGACCGAACGCTCGTCATGGGACATGTTGGCACACCGAG
TTACGAAGAACCCGTACCTGTTGACGCGTCGACGGCGATCGCTTTTCCGG
CGGGTGAGGCAGAGTCGAGCCCGAGCGTCAGTTTCTCGATTGGCGAACAT
ACCGAACGGATGATAGATGTGGATGGCGTCGAGGAGGCGACACCTGCCAC
GAACCCCGTGGTCGATACCTCAGTGCTGCTGCTCGCCGAGGCCACCTTTG
CGACTGGAGTTGAATGCGATAGATCTGCGGCGGTAGAGGACGACTTGACG
AAGCCTATTATCGTGGATAGTCAAGACGAGAAGGATTCTGGCGACGACGT
TGAGATCTTCGAAGTGGGCGATCTCGGCGCAAAAAATATGGACGTAATTG
TCGAATCA
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