mRNA_D-dichotoma_M_contig1105.918.1 (mRNA) Dictyota dichotoma ODC1387m male
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Overview
Homology
BLAST of mRNA_D-dichotoma_M_contig1105.918.1 vs. uniprot
Match: D7FTS3_ECTSI (CAB/ELIP/HLIP superfamily of protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTS3_ECTSI) HSP 1 Score: 343 bits (880), Expect = 1.500e-112 Identity = 171/229 (74.67%), Postives = 194/229 (84.72%), Query Frame = 3
Query: 90 MKSVIAICVALAAGAQAFAPPSAALARARTAFPTSSHVSRTAGPKMAAEGFSVFEDAQSQFATEFAEYSKYGWGPSAKAERWNGRHAMFGWVAIIATGYAKAHNLIPNPDQMLDPKVWGTLAYTVGTESITNERAVILMGHVHALAVSICATVAPLSFQDKLFLDADKGEKDAPGPGVIPPFVPGLTPEAEIFNGRMAMLGLVVTATVALTTGTPFLDVVNHGLGDLLL 776
MK+V A+C A+ AGAQAF P + A + AR A P S+ + T P+MAA FSVF++AQ++FA EF EYSKYGWGP+AKAERWNGRHAMFGW AIIATGY +AHNLIP+ D LDPKVWGTLAYT GTE+ITNERA+I+MGHVHALAVS+CATVAPLSFQDKLFLD D GEKDAP PG+IP FVPGLTPEAEIFNGRMAM+GLVVTAT ALTTG FL+VVN GLG LL+
Sbjct: 1 MKAVFALCAAMVAGAQAFVPTTTAFSGARVASPASASAATTT-PRMAAGSFSVFDNAQAEFAAEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIIATGYCQAHNLIPDADVALDPKVWGTLAYTTGTETITNERAIIMMGHVHALAVSVCATVAPLSFQDKLFLDVDAGEKDAPAPGLIPSFVPGLTPEAEIFNGRMAMMGLVVTATTALTTGQSFLEVVNAGLGGLLM 228
BLAST of mRNA_D-dichotoma_M_contig1105.918.1 vs. uniprot
Match: A0A6U4CWQ9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4CWQ9_9STRA) HSP 1 Score: 231 bits (588), Expect = 9.950e-69 Identity = 128/231 (55.41%), Postives = 160/231 (69.26%), Query Frame = 3
Query: 87 KMKSV-IAICVALAAGAQAFAPPSAALARARTAFPTSSHVSRTAGPKMAAEGFSVFEDAQSQFATEFAEYSKYGWGPSAKAERWNGRHAMFGWVAIIATGYAKAHNLIPNPDQMLDPKVWGTLAYTVGTESITNERAVILMGHVHALAVSICATVAPLSFQDKLFLDADKGEKDAPGPGVIPPFVPGLTPEAEIFNGRMAMLGLVVTATVALTTGTPFLDVVNHGLGDLLL 776
KMK + +A+ ALAA A F P AL R VS G +M SVF+DA + F +F E+ + GWGP+ KAERWNGRHAMFGWVAI+ATGYA+AH LIP+ D+ LD K WGTLA G +ITN RAVIL+GH+HAL +S+CAT+APLSFQDKLFL+ +GE D P G+IP GLT AE++NGR+AMLGL+V ++ +GTP L+VV+ GLG LLL
Sbjct: 19 KMKVLSVAVLAALAAPAVGFMAPRPALQRGAA-------VSARRGVQM-----SVFDDATTDFGKQFPEFYQLGWGPTTKAERWNGRHAMFGWVAIVATGYAQAHGLIPDFDKPLDLKEWGTLAIIAGKTTITNGRAVILIGHIHALMMSVCATIAPLSFQDKLFLE--EGEADEPAAGLIPAMDTGLTKSAELWNGRVAMLGLIVLVACSVGSGTPVLNVVDAGLGGLLL 235
BLAST of mRNA_D-dichotoma_M_contig1105.918.1 vs. uniprot
Match: A0A6U4CP98_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4CP98_9STRA) HSP 1 Score: 226 bits (576), Expect = 3.040e-66 Identity = 110/178 (61.80%), Postives = 138/178 (77.53%), Query Frame = 3
Query: 243 SVFEDAQSQFATEFAEYSKYGWGPSAKAERWNGRHAMFGWVAIIATGYAKAHNLIPNPDQMLDPKVWGTLAYTVGTESITNERAVILMGHVHALAVSICATVAPLSFQDKLFLDADKGEKDAPGPGVIPPFVPGLTPEAEIFNGRMAMLGLVVTATVALTTGTPFLDVVNHGLGDLLL 776
SVF+DA + F +F E+ + GWGP+ KAERWNGRHAMFGWVAI+ATGYA+AH LIP+ D+ LD K WGTLA G +ITN RAVIL+GH+HAL +S+CAT+APLSFQDKLFL+ +GE D P G+IP GLT AE++NGR+AMLGL+V ++ +GTP L+VV+ GLG LLL
Sbjct: 112 SVFDDATTDFGKQFPEFYQLGWGPTTKAERWNGRHAMFGWVAIVATGYAQAHGLIPDFDKPLDLKEWGTLAIIAGKTTITNGRAVILIGHIHALMMSVCATIAPLSFQDKLFLE--EGEADEPAAGLIPAMDTGLTKSAELWNGRVAMLGLIVLVACSVGSGTPVLNVVDAGLGGLLL 287
BLAST of mRNA_D-dichotoma_M_contig1105.918.1 vs. uniprot
Match: A0A835Z6M5_9STRA (CAB/ELIP/HLIP superfamily of protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6M5_9STRA) HSP 1 Score: 215 bits (548), Expect = 4.690e-63 Identity = 110/201 (54.73%), Postives = 143/201 (71.14%), Query Frame = 3
Query: 180 AFPTSSHVSRTAG---PKMAAEGFSVFEDAQSQFATEFAEYSKYGWGPSAKAERWNGRHAMFGWVAIIATGYAKAHNLIPNPDQMLDPKVWGTLAYTVGTESITNERAVILMGHVHALAVSICATVAPLSFQDKLFLDADKGEKDAPGPGVIPPFVPGLTPEAEIFNGRMAMLGLVVTATVALTTGTPFLDVVNHGLGDLL 773
A P SS V++ P ++ SVF DA F+ ++ ++ K GWGP+ KAERWNGRHAMFGWV I+ATGYAKAH LIP+P+ L+ K WGTL+ G ++I+NERAV+L+ +VHAL +S+CA APLSFQD L + KG+KD P G+IP VPGLT EAE+ NGR+AMLGLV+ +L TGTPFL+ V+ LG+ L
Sbjct: 20 ATPASSFVAKAGAAVKPSASSMQMSVFTDATEAFSKDYPDFYKAGWGPTTKAERWNGRHAMFGWVLIVATGYAKAHGLIPDPEVALNLKEWGTLSILAGPQTISNERAVVLIANVHALFMSLCAAFAPLSFQDPLLIP--KGQKDEPAAGLIPAIVPGLTKEAELLNGRLAMLGLVLVMGHSLATGTPFLNSVDLFLGNRL 218
BLAST of mRNA_D-dichotoma_M_contig1105.918.1 vs. uniprot
Match: A0A7S2MHN0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MHN0_9STRA) HSP 1 Score: 212 bits (539), Expect = 1.060e-61 Identity = 114/218 (52.29%), Postives = 147/218 (67.43%), Query Frame = 3
Query: 120 LAAGAQAFAPPSAALARARTAFPTSSHVSRTAGPKMAAEGFSVFEDAQSQFATEFAEYSKYGWGPSAKAERWNGRHAMFGWVAIIATGYAKAHNLIPNPDQMLDPKVWGTLAYTVGTESITNERAVILMGHVHALAVSICATVAPLSFQDKLFLDADKGEKDAPGPGVIPPFVPGLTPEAEIFNGRMAMLGLVVTATVALTTGTPFLDVVNHGLGDLL 773
L +GA AF P++ RA S+ A + A SVF DA ++FA ++ +KYGWGPS KAERWNGRHAMFGW AI+ TGY +AH+LIP+ D++LD K WGTLA G +I+NERA+IL+ HVHAL VS+CAT+AP+ D L L+ GE D P GV PPF GLT AE++NGRMAM+GL+ ++ +L TGT FL+ V+ LG LL
Sbjct: 10 LVSGASAFTAPNSFAGRAIQV----QQNSKVAQRQTAKLEMSVFTDATTEFANDYPMMAKYGWGPSTKAERWNGRHAMFGWFAIVCTGYCQAHHLIPDADKLLDLKEWGTLATISGKATISNERAIILIAHVHALMVSVCATMAPM--MDTLLLEP--GEADEPAAGVFPPFETGLTSAAELWNGRMAMMGLITASSYSLMTGTSFLNTVDLWLGGLL 219
BLAST of mRNA_D-dichotoma_M_contig1105.918.1 vs. uniprot
Match: A0A7S2W341_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W341_9STRA) HSP 1 Score: 203 bits (517), Expect = 1.950e-58 Identity = 100/177 (56.50%), Postives = 127/177 (71.75%), Query Frame = 3
Query: 246 VFEDAQSQFATEFAEYSKYGWGPSAKAERWNGRHAMFGWVAIIATGYAKAHNLIPNPDQMLDPKVWGTLAYTVGTESITNERAVILMGHVHALAVSICATVAPLSFQDKLFLDADKGEKDAPGPGVIPPFVPGLTPEAEIFNGRMAMLGLVVTATVALTTGTPFLDVVNHGLGDLLL 776
VF++A ++F ++ E+S GWGPS KAERWNGRHAMFGW II TGYA+AH LIP D++LD K WGTLA GT++I+NERA+IL+ +VHA V I A APLS+ D L L+ GE D GV PPF G+T AE++NGRMAM+G+V T + +L TGTPF+ VN LG LL+
Sbjct: 48 VFDNAVAKFKEDYPEFSAAGWGPSTKAERWNGRHAMFGWFFIICTGYAQAHGLIPEGDKLLDLKEWGTLATISGTKTISNERAIILIANVHAFMVGILAAFAPLSYMDTLLLE--DGEADEEPAGVFPPFDTGITSAAELWNGRMAMMGIVTTTSYSLLTGTPFMQTVNLWLGGLLI 222
BLAST of mRNA_D-dichotoma_M_contig1105.918.1 vs. uniprot
Match: A0A7S1BP97_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BP97_9STRA) HSP 1 Score: 203 bits (517), Expect = 4.650e-58 Identity = 116/234 (49.57%), Postives = 145/234 (61.97%), Query Frame = 3
Query: 72 RTLPVKMKSVIAICVALAAGAQAFAPPSAALARARTAFPTSSHVSRTAGPKMAAEGFSVFEDAQSQFATEFAEYSKYGWGPSAKAERWNGRHAMFGWVAIIATGYAKAHNLIPNPDQMLDPKVWGTLAYTVGTESITNERAVILMGHVHALAVSICATVAPLSFQDKLFLDADKGEKDAPGPGVIPPFVPGLTPEAEIFNGRMAMLGLVVTATVALTTGTPFLDVVNHGLGDLL 773
R + MK I C L AG AF+P + A + A S + G + ++ VFEDA ++ E+ +++K+GWGPS KAERWNGRHAMFGW I+A+ YA HNLIPN D LD K WGTLA G +ITNERAVIL+ +VHAL VS A +AP SF D+L L +GE D G++PP V GLTPEAEI NGRMAM+GL+ + P +DVVN LG LL
Sbjct: 26 RRITTMMKLAIVSC--LLAGVSAFSPSGSRFAFSPKAVTELSAFND--GRSLVSDA--VFEDAMGEWKAEYPKFAKFGWGPSTKAERWNGRHAMFGWFVIVASAYAHGHNLIPNADMALDLKQWGTLATISGKSTITNERAVILIANVHALFVSFLAAMAPSSFADQLLLK--EGEVDEEPYGLVPPLVTGLTPEAEIMNGRMAMMGLIALVGTSAINQMPMVDVVNEWLGGLL 251
BLAST of mRNA_D-dichotoma_M_contig1105.918.1 vs. uniprot
Match: A0A7S3JY58_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JY58_9STRA) HSP 1 Score: 197 bits (502), Expect = 2.250e-56 Identity = 98/179 (54.75%), Postives = 124/179 (69.27%), Query Frame = 3
Query: 243 SVFEDAQSQFATEFAEYSKYGWGPSAKAERWNGRHAMFGWVAIIATGYAKAHNLIPNPDQMLDPKVWGTLAY-TVGTESITNERAVILMGHVHALAVSICATVAPLSFQDKLFLDADKGEKDAPGPGVIPPFVPGLTPEAEIFNGRMAMLGLVVTATVALTTGTPFLDVVNHGLGDLLL 776
S F +A +F +++ ++ YGWG S KAERWNGRHAMFGW II TGYA++H LIP+ D+ LD VWGTLA T +ITNERA+IL+ ++HAL VS+CA AP QDKL L+ GE D G+IP F PGL P+AE+ NGR+AMLG+ + +L G PF+DVVN LG LLL
Sbjct: 37 SPFTEATDKFKSDYPSFAAYGWGVSPKAERWNGRHAMFGWFFIICTGYAQSHGLIPDADKTLDLSVWGTLAQITPRVSTITNERAIILVANIHALMVSLCAAFAPFPTQDKLLLEP--GEADEDPAGIIPKFTPGLNPDAEMINGRLAMLGITTVSAYSLIYGVPFMDVVNSMLGGLLL 213
BLAST of mRNA_D-dichotoma_M_contig1105.918.1 vs. uniprot
Match: A0A8J6CBU4_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CBU4_DIALT) HSP 1 Score: 197 bits (501), Expect = 4.320e-56 Identity = 116/232 (50.00%), Postives = 145/232 (62.50%), Query Frame = 3
Query: 90 MKSVIAICVALAAGAQAFAPPSAALARARTAFPTSSHVSRTAGPKMAAEGFSVFEDAQSQFATEFAEYSKYGWGPSAKAERWNGRHAMFGWVAIIATGYAKAHNLIPNPDQMLDPKVWGTLAYTVGTESITNERAVILMGHVHALAVSICATVAPLSFQDKLFLDADKGEKDAPGPGVIPPFVPG---LTPEAEIFNGRMAMLGLVVTATVALTTGTPFLDVVNHGLGDLLL 776
MK + +A A A A+AP + R A S VS A P+ A SVFE A + F +F E+SK G+GP+ KAERWNGRHAMFGWV I+ATGYA++HNLIPN D LD WG LA SITN RA+IL+ HVHAL VS+ ++++P FQD L L+ E+D G+ P +PG LT AE+ NGR+AMLGL+ +L TG P L+VVN GLG LLL
Sbjct: 1 MKVLALATLAFAGHAAAYAPAARTALRGAKA----SAVSARAAPRAA----SVFEGAMANFEKDFPEFSKRGFGPTTKAERWNGRHAMFGWVVILATGYAQSHNLIPNFDAPLDLSAWGPLARQGDYSSITNGRAIILIAHVHALFVSLASSLSPFGFQDSLTLNMKAAERDEAAYGLFVP-IPGQAGLTAAAEMMNGRLAMLGLIAAVGASLATGQPLLEVVNTGLGGLLL 223
BLAST of mRNA_D-dichotoma_M_contig1105.918.1 vs. uniprot
Match: M2XW22_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XW22_GALSU) HSP 1 Score: 192 bits (488), Expect = 2.950e-54 Identity = 98/190 (51.58%), Postives = 127/190 (66.84%), Query Frame = 3
Query: 204 SRTAGPKMAAEGFSVFEDAQSQFATEFAEYSKYGWGPSAKAERWNGRHAMFGWVAIIATGYAKAHNLIPNPDQMLDPKVWGTLAYTVGTESITNERAVILMGHVHALAVSICATVAPLSFQDKLFLDADKGEKDAPGPGVIPPFVPGLTPEAEIFNGRMAMLGLVVTATVALTTGTPFLDVVNHGLGDLL 773
SRT G K + +F A FA+E+ ++ G G ++KAERWNGRHAMFG +AI+ TGYAK H IPN DQ+LD + WGTL + ITNERA++L+ H+H L VSI A +AP SFQD+L L GEKD G++PPF GLT EAE++NGR+AMLG+ ++ TG LDVVN GLG++L
Sbjct: 32 SRTYG-KWRMQQLGIFRQAMKDFASEYPDFVSRGLGVTSKAERWNGRHAMFGLLAIVLTGYAKGHGWIPNADQVLDMQQWGTLVMEGFNQKITNERAIVLVAHIHVLLVSIAAAIAPFSFQDRLLLRP--GEKDEEPAGLLPPFKLGLTKEAELWNGRLAMLGVTFIVATSIITGQSILDVVNKGLGNIL 218 The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1105.918.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dichotoma_M_contig1105.918.1 >prot_D-dichotoma_M_contig1105.918.1 ID=prot_D-dichotoma_M_contig1105.918.1|Name=mRNA_D-dichotoma_M_contig1105.918.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=230bp MKSVIAICVALAAGAQAFAPPSAALARARTAFPTSSHVSRTAGPKMAAEGback to top mRNA from alignment at D-dichotoma_M_contig1105:61251..63564- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dichotoma_M_contig1105.918.1 ID=mRNA_D-dichotoma_M_contig1105.918.1|Name=mRNA_D-dichotoma_M_contig1105.918.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=2314bp|location=Sequence derived from alignment at D-dichotoma_M_contig1105:61251..63564- (Dictyota dichotoma ODC1387m male)back to top Coding sequence (CDS) from alignment at D-dichotoma_M_contig1105:61251..63564- >mRNA_D-dichotoma_M_contig1105.918.1 ID=mRNA_D-dichotoma_M_contig1105.918.1|Name=mRNA_D-dichotoma_M_contig1105.918.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=1380bp|location=Sequence derived from alignment at D-dichotoma_M_contig1105:61251..63564- (Dictyota dichotoma ODC1387m male)back to top |