mRNA_D-dichotoma_M_contig1103.908.1 (mRNA) Dictyota dichotoma ODC1387m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dichotoma_M_contig1103.908.1
Unique NamemRNA_D-dichotoma_M_contig1103.908.1
TypemRNA
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Homology
[Close]
BLAST of mRNA_D-dichotoma_M_contig1103.908.1 vs. uniprot
Match: M1WFX3_CLAP2 (Related to PRY1-strong similarity to the plant PR-1 class of pathogen related proteins n=2 Tax=Claviceps purpurea (strain 20.1) TaxID=1111077 RepID=M1WFX3_CLAP2)

HSP 1 Score: 76.3 bits (186), Expect = 1.980e-12
Identity = 37/71 (52.11%), Postives = 44/71 (61.97%), Query Frame = 2 
Query:  332 EAIGHFTQVVWKNTQELGCASAQCTFQHGRWTFYKTYVVCRYSPPGNYVGQYLENVEANASKTYDECNDLY 544
            EA GHFTQVVWKNT+ +GCA A C    G       YVVC+YSPPGNY GQY + V     +T    +D+Y
Sbjct:  108 EATGHFTQVVWKNTKTVGCAWAYCGTSGGAGKALGYYVVCKYSPPGNYKGQYADQV---GRQTKGNPSDVY 175
[Close]
BLAST of mRNA_D-dichotoma_M_contig1103.908.1 vs. uniprot
Match: A0A0N4Z6B9_PARTI (SCP domain-containing protein n=1 Tax=Parastrongyloides trichosuri TaxID=131310 RepID=A0A0N4Z6B9_PARTI)

HSP 1 Score: 73.9 bits (180), Expect = 7.330e-12
Identity = 33/56 (58.93%), Postives = 40/56 (71.43%), Query Frame = 2 
Query:  332 EAIGHFTQVVWKNTQELGCASAQCTFQHGRWTFYKTYVVCRYSPPGNYVGQYLENV 499
            +  GHFTQ+VWKNTQ +GCA+A  T    RW     ++VCRYSPPGNY GQ+ ENV
Sbjct:   95 KGTGHFTQLVWKNTQYMGCAAATST----RWNL--VFIVCRYSPPGNYQGQFFENV 144
[Close]
BLAST of mRNA_D-dichotoma_M_contig1103.908.1 vs. uniprot
Match: A0A7S3VU22_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VU22_DUNTE)

HSP 1 Score: 76.6 bits (187), Expect = 1.190e-11
Identity = 37/67 (55.22%), Postives = 49/67 (73.13%), Query Frame = 2 
Query:  302 GETGSSSDPDEAIGHFTQVVWKNTQELGCASAQCTFQHGRWTFYKTYVVCRYSPPGNYVGQYLENVE 502
            GE   +    E IGHFTQ+VWK+T ++GCA+AQCT++ GR     TY+VCRYSP GN +GQ+ ENV+
Sbjct:  229 GEVTPNMAHFEEIGHFTQMVWKSTTDIGCATAQCTWK-GRDA---TYLVCRYSPAGNVLGQFAENVK 291
[Close]
BLAST of mRNA_D-dichotoma_M_contig1103.908.1 vs. uniprot
Match: K5XDF9_AGABU (SCP domain-containing protein n=3 Tax=Agaricus bisporus TaxID=5341 RepID=K5XDF9_AGABU)

HSP 1 Score: 73.2 bits (178), Expect = 1.980e-11
Identity = 34/59 (57.63%), Postives = 41/59 (69.49%), Query Frame = 2 
Query:  335 AIGHFTQVVWKNTQELGCASAQCT----FQHGRWTFYKTYVVCRYSPPGNYVGQYLENV 499
            A GHFTQVVWK++  LGCAS QCT    F  G WT     ++CRY+PPGN+ GQ+ ENV
Sbjct:  111 ATGHFTQVVWKSSTNLGCASQQCTTGSPFGSGEWTN----ILCRYTPPGNFEGQFPENV 165
[Close]
BLAST of mRNA_D-dichotoma_M_contig1103.908.1 vs. uniprot
Match: M1W178_CLAP2 (Related to PRY1-strong similarity to the plant PR-1 class of pathogen related proteins n=1 Tax=Claviceps purpurea (strain 20.1) TaxID=1111077 RepID=M1W178_CLAP2)

HSP 1 Score: 73.2 bits (178), Expect = 2.320e-11
Identity = 35/70 (50.00%), Postives = 43/70 (61.43%), Query Frame = 2 
Query:  335 AIGHFTQVVWKNTQELGCASAQCTFQHGRWTFYKTYVVCRYSPPGNYVGQYLENVEANASKTYDECNDLY 544
            A GHFTQ+VWKNT+ +GCA A C    G       YVVC+YSPPGNY GQY + V     +T    +D+Y
Sbjct:  109 ATGHFTQLVWKNTKTVGCAWAYCGTSGGAGKALGYYVVCKYSPPGNYKGQYADQV---GRQTKGNPSDVY 175
[Close]
BLAST of mRNA_D-dichotoma_M_contig1103.908.1 vs. uniprot
Match: A0A8H5D757_9AGAR (SCP domain-containing protein n=1 Tax=Leucoagaricus leucothites TaxID=201217 RepID=A0A8H5D757_9AGAR)

HSP 1 Score: 72.8 bits (177), Expect = 2.570e-11
Identity = 34/59 (57.63%), Postives = 40/59 (67.80%), Query Frame = 2 
Query:  335 AIGHFTQVVWKNTQELGCASAQCT----FQHGRWTFYKTYVVCRYSPPGNYVGQYLENV 499
            A GHFTQVVWK T  LGCAS  C     F  G WT    Y+VCRY+PPGN++GQ+ +NV
Sbjct:  109 ATGHFTQVVWKATTTLGCASHVCNTGSPFGSGEWT----YIVCRYTPPGNFLGQFPQNV 163
[Close]
BLAST of mRNA_D-dichotoma_M_contig1103.908.1 vs. uniprot
Match: M1W487_CLAP2 (Related to PRY1-strong similarity to the plant PR-1 class of pathogen related proteins n=1 Tax=Claviceps purpurea (strain 20.1) TaxID=1111077 RepID=M1W487_CLAP2)

HSP 1 Score: 72.8 bits (177), Expect = 3.150e-11
Identity = 35/71 (49.30%), Postives = 43/71 (60.56%), Query Frame = 2 
Query:  332 EAIGHFTQVVWKNTQELGCASAQCTFQHGRWTFYKTYVVCRYSPPGNYVGQYLENVEANASKTYDECNDLY 544
            EA GHFTQVVWKN++ +GCA   C    G       YVVC+YSPPGNY GQY + V     +T    +D+Y
Sbjct:  108 EATGHFTQVVWKNSKTVGCAWKDCGRSGGAGKALGYYVVCKYSPPGNYKGQYADQV---GRQTKGNPSDVY 175
[Close]
BLAST of mRNA_D-dichotoma_M_contig1103.908.1 vs. uniprot
Match: A0A0N5A2C4_PARTI (SCP domain-containing protein n=1 Tax=Parastrongyloides trichosuri TaxID=131310 RepID=A0A0N5A2C4_PARTI)

HSP 1 Score: 73.9 bits (180), Expect = 8.160e-11
Identity = 33/56 (58.93%), Postives = 40/56 (71.43%), Query Frame = 2 
Query:  332 EAIGHFTQVVWKNTQELGCASAQCTFQHGRWTFYKTYVVCRYSPPGNYVGQYLENV 499
            +  GHFTQ+VWKNTQ +GCA+A  T    RW     ++VCRYSPPGNY GQ+ ENV
Sbjct:  224 KGTGHFTQLVWKNTQYMGCAAATST----RWNL--VFIVCRYSPPGNYQGQFFENV 273
[Close]
BLAST of mRNA_D-dichotoma_M_contig1103.908.1 vs. uniprot
Match: A0A8J2JEJ9_9HEXA (Hypothetical protein n=1 Tax=Allacma fusca TaxID=39272 RepID=A0A8J2JEJ9_9HEXA)

HSP 1 Score: 69.7 bits (169), Expect = 1.770e-10
Identity = 29/54 (53.70%), Postives = 40/54 (74.07%), Query Frame = 2 
Query:  338 IGHFTQVVWKNTQELGCASAQCTFQHGRWTFYKTYVVCRYSPPGNYVGQYLENV 499
            +GHFTQ++W+ +QELGCA++Q T+Q        T VVC Y+PPGNY+GQ  +NV
Sbjct:   96 VGHFTQILWRESQELGCATSQNTWQQS------TVVVCLYNPPGNYIGQETQNV 143
[Close]
BLAST of mRNA_D-dichotoma_M_contig1103.908.1 vs. uniprot
Match: A0A8J2PJN8_9HEXA (Hypothetical protein n=1 Tax=Allacma fusca TaxID=39272 RepID=A0A8J2PJN8_9HEXA)

HSP 1 Score: 70.1 bits (170), Expect = 2.470e-10
Identity = 31/64 (48.44%), Postives = 43/64 (67.19%), Query Frame = 2 
Query:  308 TGSSSDPDEAIGHFTQVVWKNTQELGCASAQCTFQHGRWTFYKTYVVCRYSPPGNYVGQYLENV 499
            TG +    +AIGHFTQVVWK++Q++GC +A+   +       KT+  C YSPPGNY G+Y +NV
Sbjct:  111 TGKTKVQGKAIGHFTQVVWKSSQQVGCGTAENAGEK------KTFTCCLYSPPGNYEGEYTKNV 168
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1103.908.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
M1WFX3_CLAP21.980e-1252.11Related to PRY1-strong similarity to the plant PR-... [more]
A0A0N4Z6B9_PARTI7.330e-1258.93SCP domain-containing protein n=1 Tax=Parastrongyl... [more]
A0A7S3VU22_DUNTE1.190e-1155.22Hypothetical protein n=1 Tax=Dunaliella tertiolect... [more]
K5XDF9_AGABU1.980e-1157.63SCP domain-containing protein n=3 Tax=Agaricus bis... [more]
M1W178_CLAP22.320e-1150.00Related to PRY1-strong similarity to the plant PR-... [more]
A0A8H5D757_9AGAR2.570e-1157.63SCP domain-containing protein n=1 Tax=Leucoagaricu... [more]
M1W487_CLAP23.150e-1149.30Related to PRY1-strong similarity to the plant PR-... [more]
A0A0N5A2C4_PARTI8.160e-1158.93SCP domain-containing protein n=1 Tax=Parastrongyl... [more]
A0A8J2JEJ9_9HEXA1.770e-1053.70Hypothetical protein n=1 Tax=Allacma fusca TaxID=3... [more]
A0A8J2PJN8_9HEXA2.470e-1048.44Hypothetical protein n=1 Tax=Allacma fusca TaxID=3... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig1103contigD-dichotoma_M_contig1103:623..9275 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons5
Model size1870
Cds size282
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927616.4915793-UTR-D-dichotoma_M_contig1103:622..6951622927616.4915793-UTR-D-dichotoma_M_contig1103:622..695Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1103 623..695 +
1690798063.3073196-UTR-D-dichotoma_M_contig1103:622..6951690798063.3073196-UTR-D-dichotoma_M_contig1103:622..695Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1103 623..695 +
1622927616.5081394-UTR-D-dichotoma_M_contig1103:2889..28931622927616.5081394-UTR-D-dichotoma_M_contig1103:2889..2893Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1103 2890..2893 +
1690798063.3166676-UTR-D-dichotoma_M_contig1103:2889..28931690798063.3166676-UTR-D-dichotoma_M_contig1103:2889..2893Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1103 2890..2893 +
1622927616.5649292-UTR-D-dichotoma_M_contig1103:6925..71381622927616.5649292-UTR-D-dichotoma_M_contig1103:6925..7138Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1103 6926..7138 +
1690798063.3560493-UTR-D-dichotoma_M_contig1103:6925..71381690798063.3560493-UTR-D-dichotoma_M_contig1103:6925..7138Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1103 6926..7138 +
1622927616.5756562-UTR-D-dichotoma_M_contig1103:7977..92751622927616.5756562-UTR-D-dichotoma_M_contig1103:7977..9275Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1103 7978..9275 +
1690798063.367039-UTR-D-dichotoma_M_contig1103:7977..92751690798063.367039-UTR-D-dichotoma_M_contig1103:7977..9275Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1103 7978..9275 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927616.5238497-CDS-D-dichotoma_M_contig1103:2893..29471622927616.5238497-CDS-D-dichotoma_M_contig1103:2893..2947Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1103 2894..2947 +
1690798063.3245258-CDS-D-dichotoma_M_contig1103:2893..29471690798063.3245258-CDS-D-dichotoma_M_contig1103:2893..2947Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1103 2894..2947 +
1622927616.538398-CDS-D-dichotoma_M_contig1103:6030..62541622927616.538398-CDS-D-dichotoma_M_contig1103:6030..6254Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1103 6031..6254 +
1690798063.332884-CDS-D-dichotoma_M_contig1103:6030..62541690798063.332884-CDS-D-dichotoma_M_contig1103:6030..6254Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1103 6031..6254 +
1622927616.553225-CDS-D-dichotoma_M_contig1103:6921..69251622927616.553225-CDS-D-dichotoma_M_contig1103:6921..6925Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1103 6922..6925 +
1690798063.3430927-CDS-D-dichotoma_M_contig1103:6921..69251690798063.3430927-CDS-D-dichotoma_M_contig1103:6921..6925Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1103 6922..6925 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig1103.908.1prot_D-dichotoma_M_contig1103.908.1Dictyota dichotoma ODC1387m malepolypeptideD-dichotoma_M_contig1103 2894..6925 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dichotoma_M_contig1103.908.1

>prot_D-dichotoma_M_contig1103.908.1 ID=prot_D-dichotoma_M_contig1103.908.1|Name=mRNA_D-dichotoma_M_contig1103.908.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=94bp
MHNADPLTYNDGMATEAQAYADSLAASCGGLVHDSTTADGENLAYCATAP
SPVESCASGLDATPRWYDEVQFYVPGRPEAAATPTRPLGTLPR*
back to top

mRNA from alignment at D-dichotoma_M_contig1103:623..9275+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dichotoma_M_contig1103.908.1 ID=mRNA_D-dichotoma_M_contig1103.908.1|Name=mRNA_D-dichotoma_M_contig1103.908.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=8653bp|location=Sequence derived from alignment at D-dichotoma_M_contig1103:623..9275+ (Dictyota dichotoma ODC1387m male)
TGATCGCTCTTTGGGCCAGCGTGGCAACGGCTGCTCAGGTGGACGGCATT
CTCGAGCAGCACAACGTGTACCGGTGAGAAGAGTCTAGCTTAGCTGATGG
AACGAGGTTGATGCCTACTTGGCTGCTGTCATTGTCGACACTTACCTCCG
GTGAGGGATCTGCCCTTTTTCCTTCCCTATTCCTGGTATGTGAAAGGCTC
TGGGTCCTACCATCCTTGTACAGGACTTAGGCTTGACAAACTGGTTTTTC
TGCGGTCCATGTACGTGCGGGTTAAATAGGTAGATTAGGGGATCGAAGAT
CGACTTTGTAACGGAACATATCTATTCCTCGAATTGTAAGCACTCAGATA
TTATTCCTGTACCCTGGTACTGTACAGTAGGTTTGTGTGTTGAAACTTGG
AACAAGCTCCTATTACATGGTTTGTGGCTGATTGGCTCAAGCCTAGGGCG
CCAGCCACCACAGAGACTCAAGGTGTAGGAGACTCGAAGTGTTGCTGAAT
CGCTGGTCTTGAACTACCCGAGATGTCGGGTCCCTTCTGCGGTTTCTACC
GCAGAAGATATTGGGTCGCGGGTCTGTGTTAGGGAGTGACACCGAGCGCA
TCGAGGTCGGGCCATCAATCAGGTCGTGGGGTGTGTCGTCTGCGTAGCTT
TTCGCTGAAATCCCGAGCGACACTACAACCTGGGCTTGTTTGCTGGAACA
CACTTTGTTTCAATTACGTACGATCACACCAAGAAGCTACCGTCCCTATT
CTTTAAGATCCCTGTACAATACCACTGTTGAGGCCATTTGGTGCGCATAC
GACCTACATGCACTTCTACTGTATACTTCGCACGGTACTGTACGTACAAC
AGCAGGTCCTCCTCGTGAGGCATGTGCTTGTACCTGATTTTGCCACAGTC
CGAAGTCACTTACACTACAGCTCTTCTGCCACTGGACTACGGACAGCGGT
CTGCGGTGTAGTAAACGCTTCTGTCGCACACGACAGCACCAAGCAATTCA
ATTGTTGTACAGTAGAACCTGGTTACTGTTTGTCCAACGTATCTACCAGA
CTGTTTTCGTTAGGGCCGTTATTAACGAACCACTTTTCCCCCAAATTCCA
TATCCTGTAGTAAATTGAAGGCGATTGTCCAAGTAATTCGTACCTGAAAA
CCGTCTGTGGTGGAAAGGATTTGAACGGCGCTTGCGTTAATTCTTCATCC
TCATTGGCCTCCGTCGCATCCAATAGATTGACAGCACCTGGGCCCGGGTC
GATTCCGTTGCATTGAACCCCAGTAATGCCGGATTACATGAACGGATTTA
ATCACTTGGACGAACACCTTTGATTTTCATGGGATTCGGGTGGGAATTGG
TTCGTTAAAAACGGCCCTTAGCATTCCGATCAAGACTGGTGTTCGTTACA
GTGGTTTTGTAAAGACACATCATCTCTGTTCTATGCAATTGCTGCAGGCC
CTGTTTACCCCCAGCCGAGATTATCTACGGCATACTCGACCTCAGTTCTG
CCTAGCAGCATTATTCCCATGACAAACGCCCATGATGCTATGAGATTAGG
TCCTAAGAATCGCCTGAACGAAGTCAGCAGTTGAGACAGTAGTGACAAGA
AAATACTGTTCTACTGTAGCTACTGTACAGTGTAAGGCACAAGTTAGAAA
AGACCGGGCAACACTGACCGGGATATTGAACGATCAATAGTCCTTGGATA
TCTTTGGATGGTTTGTTGTCTCGAAGATCATCTCGGGTGGACTTTAGAGT
GTGGCATGCAATGGTAAGGTGGACAGCAGTCTGGCACTGTACCTCAAACG
CACGAGACACCTGATGCTTCCTGTACAAGAAATCTCTTCTCGGCAATCGT
GGGTGCTTTTGATACCTCTATCTTCGGTACGGGGACAGCACTGTGTAGGT
TCATCGCATCACCATCCGCCCGCGTACCTAATGAGCTGGATGGGCACTTG
TGGAAAATATGTCCCGTCGTTCGCCGATGATGTGATTCCTTTCCCTCTCG
AAAACAATGTTTCTGTTCAGAAGCGTCGTTGGCAAGTGGCAAGCATGACA
CCAGTGTCCAAAGCCCCCCCCGAATCACGGATACCCATAAGTCTGCGAAA
AAAACGGTTGTTGAGTTCGAATCTCCCTCAGAGCCCTCAAGGGGATACGA
GGGAGAGGGTTTGCGGTTGTCCCACACCTCGAATATGAATCTTGCATGCC
GTTGACGCTCGTGGCTCGAACCGATGTCATGTTGTTTCCTCCTGTTGTGC
TTGGGTTCTGTGTTCAGGTGCATGCACAACGCCGATCCTCTAACGTACAA
CGACGGCATGGCTACGGAGGCACAGGTGAGACCCAGCCATACAGTCCCTA
GATGACGCCGAAGTACACGCACATGGCGGTACTCACGGGAATTGACCATC
CCCGTGGAACAAATTCCGTTGCTTTCTTTGGGCGCAGAGGTCCTCTCGGC
AGCGCATCGCATAACATCGTTCCAATGGGGCCCTGGCAGAGGAACAGTTT
CTCTGTTCTCGCGAATGCTGCATTCTTGTTGATTTCTTGTGGAGACAACT
TCGGCCGTGGGTTCGATTCCTGTTGTCCCGCTTGGCCTCCAAGTGCGTAC
CCATCCCGACGGTGTAAAGCGCGAGCAGTGCAATATTAGAGGGTTTCCAC
GTAGACCTCGTGTCTTTAGGTTCATGCCTATATCTTTAACTCAAAAGTCC
CGTAACAGAGATGATTGGGTGCATAATGCAGGAGTGAGGTTGAAGTATAG
CGCTACATGGTTGATGTTCCATCAGCGATCGTACAGATGGGTCGAAATAT
GCCCTTGGGGCTACATCGAGTACTATAGTACATTTCAGGGAACGTTGATC
GGGTAAGAGGTTAAAGGATATCGTTGTAGGTCATAACAGGCCTGAACCGT
GCGATCTGGAGAGAGCAACGTGCAGCAGAAGCGACGACTGCGCTTCAATT
GTTCCTCTATGCACGAGAAATTGGCGAATAGAACATCGCGGAAGATACGT
ACGTGGGAAGTATTCTTATGATCTTCTCATCCGCACCCGACCCTAAAGGG
CATATAATCTATTCCTGTAACGGCTTCATGGACGCGATTGGAGGGATGGC
ATTTTTGGAGCCCTTCAGATTCGAAAAGGAATACTTCATGGTGCTGTTGG
ACGTGCTGGAATGCCTTTTCGCCAAGCGGCCCCGACATATCACCTCCGTC
ATGCTTTCTAGCCTTGTCGCCAAAGCATTTCATGCCTTCCTCCTCGCGCT
TTTCTGCTCCATAAACGGATTCCCCGATGGATTCTGGATCCTGTGCCCGA
TTTCGGTCCCCTTTGATTTCTAGGCGTCTTCGTCGCACTTTCCGTTCATC
AACTATGATCACATCCCCCTCGCTTTGTTTGCTGTGGGTGCTAGGGACAG
CACCAGCAACGATCGGTGCCGACTTCTCCCTAGAAGAGGCACTTATTACC
TCGTTCATCTCGCCTCAATATCCACTACTCCTTAGTCCCAATAACGTTAC
GATAATCCTAGTAAAATGTTAGCTTGACTTCTAGTAGAGGGGTTCACCAG
TTCACAGGGTCCTCCGATGAGTAGTGCGGCACTACCACCGCCTCGTCGGG
CCTACATCATCGACGGCTCTTTCTCCTCATCTGCGCTGAACGTAACTTGA
AACCTTTTTCTACACTTCCACTGGGGAACAAATTAGAAACGGTTGGTCAA
AGTTAATGGTTGAATTTTCTCTAATTCTTCCTCGCCAAGGTTGTATCTTG
ACTACAGTACAGGTAATCTGGATACAGCATAATTAACATACTTCCGCCGA
CGCCCTCTCTTCAACTACCTCTAAAGATCTAACACCTCCGTCGTGCCCTT
CGAAAGACATGAAGCTCATTTATGAAAATCAGGAGGCATCGTTCACTTCT
TTAACTGCCTGTTTCATGTCTTTTGCCTGTTTTCATGTCTTTAACATATA
CGTGACCATGGACAACCATCGATATCCCGTTCCGTGAAAATACGCACACT
ATTTTGAAATACATGGTGGTAATTTTCAAGGACCCGATTTTGGATGTCCC
TCCATAACGTTTGACTGAGATAGAGTAAAAAAAAAAAAACAGCTTCGGGA
CGCCCGCAGCAAGGTGCAAAAGAGTAGCGAGTCGCCAAAAAAACAAGTAA
AAAAGGGGAAAAAAAAAATCATGCGCGCGGCGGCTCTCAAACCCACGATA
TTGGCCCTAGAGCAACTTTTTCCCCATATATTTTCGTACTCCGTTTTTTT
GTTTTCTCACCAAACCACCCACACATGGCCAGGAAGACCCACAACCACTA
CACAAATGCCTCTACCGCGCCTTTAGCGTATATACAACATCCACCAACGT
ACATTCGTCACAAAATTGTCCGTTTTCAACTAAAATATTCCtTTTTTGTA
CAACATTCTCACTAGAGAACACGGGAAAAAAACTGAAAAAATAAGTTACA
AGAATGCGCCATCGACTCTACGGCCTCCATTCCTTCGGGGTCGGGCGCCT
GTGTGACTTGTACTTCTTGTACGTCTTCTTGCCCTCAGGCCCTACCACAC
GCGTCTCGCGGTACATGAGGGCGTGTGTGTACGCCTTCTTGCAGTAGCCC
TGGACTACCGAAACAGCCTGCCTGTCCTTCTCTGGTCTAAAACTCAGCGG
CACGTTCTTGCGCAAAAATTCCAACGAATATTTGCAGTTCTTGCTGTAGG
GAGAGCACCATCTGTTGCTCGAGCTCCATGAGGTTGCCGGTCTTCACAAC
AATATGTGTACATCTACCGGTGCAGTGCGCGCTGCGGGCAAACCTAACGG
TTCGACCGCAATTTTTTGAATTTGCTGTCTTGGTTATTTTCTCCCTGGAG
CCAGGCAACACAGGGTTCAGACCCGGGCGATCTAGAACCAGTTTTTTGCG
ACGATTCCGAAGGAATAGATTTTTTTTTTCACAGTGGTGGGGGCTCGGCA
AATCAAAATTTCCTAGTTCCGCCGCATTTTCGCGAAACGGTATATTCGCT
ATAACTCGTCACCAAGGTGTCTGTGAAACGTAAAAGTAGGTTCATTCGAA
AGCCCTGGTCTGTAGCTTTCGAATGGTATGCATTTTATTGGGTGAATACC
CTGGCTCCAGTTAGAAAAAAAAACAAGTGGCCTGTGGGCGGGTCCTTGAC
AATTACCACTTATTTTGAAATATACCACCCCATCTCTGCGATGCCATGCA
AAAGAAAATAACTGTAAGACTGACCTGGATGGAGTCTACATGGAAACCCT
GTTTAGGCGCGGTCGGTTGACGGCCTCTGCTGCTTCTATTGCAGACTACG
GAATACTGCCCCTACTATAGAGCTGCATCGAAGGGACGATTTAAAATGTG
AATGAATGTTATGTTACGCAGCATCGTTCATGACCGATATTACTGTCATC
TCCTGCAGGCATACGCGGACTCCCTTGCCGCCTCGTGCGGCGGGCTCGTT
CACGACAGTACTACTGCGGATGGCGAGAATCTAGCGTACTGTGCCACTGC
CCCTTCACCCGTAGAATCATGCGCCTCCGGATTGGACGCCACTCCACGCT
GGTACGATGAAGTCCAATTCTATGTACCGGGGAGACCGGAAGCAGCAGCG
ACCCCGACGAGGCCATTGGGCACTTTACCCAGGTATGGCGGGCTCTCTCT
ATGGCTCTTTGTCGCCAGGCGACGAGGGCAAGTACATATATGAGCATATT
CCACAGGCGCGACGCCAAAGACGGCACGGGTAAAGCAGAACGACCCAAGG
CCTCACGATACCGCACGTAGGAACCCACCGCTGACGAGGTGCCTCTCAGA
AGCTTAAGTGACTTGTACACTTGCATGAGAAACAAGCCGAGTCCGCCCTT
TGCAATATCGCCATGGTACTTGTTCCTCAGACACTGCTGAAAGAAATTCT
TGCATGTCATCCTCATCTTACCTAGAGCCGAACAAGGGCATCCCGGGGTG
AAATCAAATCTCATCCAAGATACTGCAAATAATTTCACACAGACTGTCAC
GTGTTGAACCCTCTATTCGACAATTCAATGACAATCTTCAATCTTTGAAT
GTCTCGAATCCAAAATACAGAAGGCGCCAATCAATCCTCGTGTTCCGAGC
GGCCCGTGAGATCACCTAACACACCAAAAGAACTCCTTGATTTCAAGTTG
GTGAGGTGTCTCATGTCGGTTTCAAACTCACCATTACTCCCACCTAGTTA
CGGCATTTAATAGTCGATTTGCGTCAGATCTAACATCCTATCTCTGCCCG
TCATGTCTTCAACCATGTGCTGCCAACCCCACGGTAACACTTGCCTCAGG
TAGTGTGGAAGAATACCCAGGAGCTGGGATGCGCCTCTGCCCAGTGCACG
TTTCAGCACGGGCGATGGACGTTCTACAAAACGTACGTCGTGTGCCGCTA
CAGCCCTCCTGGGAACTACGTGGGGCAGTACCTTGAGAACGTCGAGGCCA
ATGCAAGCAAGACCTACGACGAGTGCAACGACCTTTACGGCTAGCCTTGG
CCAAGGTCGAGTGAGGGTGAGCCGGATCCCGCGTTATCCTGGTAGTGCTA
GTCTCGAACGTATTTTCATAATAGGATCCGTTCTGCGCAAACCTCGGCGG
ACACGAGTTTCGGGAACACTCGTAAAATGCTGCATGCCGAAGCCGTATAG
ATAGATCGATGAGTCGACCATCAGGTGGCAGGGAAAGGATTTGAGGGAAA
TTGAACGCGGCCAGAAGCCACGGAGATGTGATGAGCATTTGTAAGATACG
AATGGGACACGACAAGTGTGCCCGCATATCCAATAGTAGCCCACATGCCG
TCTTCTCGGTCGTTGTGACATTACCTATCTTGAGTGGGTGGTGGACGTCG
GGGAACTATGGAGGTAGAAAGCCCGCATTGTAGGTCTCGAGCTGTGTTGC
GCTGTGTTGAGCTCTACAGAGCGTCCTCGTAACATCTCCATTTCTTTGGG
GACAGTGTGAGCACCAGCGCAACGGATTGGGATGAAACGAGGACATGGTG
ATCAATCTATATTTTCCCATGAGTCTGGGGAGTGTACCGCGACATTTCTA
CTGTAGAAAGGTGACTTTCCGAGTATCCATTGGAAGAGATCAAAGGTCGG
CCATAAATGACCTTAGATCTGTAAGCACCCCAATGTGGCTTCGGAACATC
CTTTGCATCCGCGTTCTTTGAGGGGCGAGCTTTCGCACGGACAACGCCTT
TGGAATGCATTCTTACGGGTGAAAGATGAAGAGAACCTGAGAGAGTCCCT
AAGGTCGCACTAGGGGATCAGATTCCCAATGCCGTACGTGCGGCTAGAGA
GTGTCTAACCTGGGACCCGGAACCTGTGCCTTCCTCGCCCGCATGCACCG
TGCAGTGAGCTCGGAGAGAGGCTGGGCAGCTTTTGCCGTACCTACACAGG
TGCCGTGAAGCGACTTCATATACGAGGCTGCATCTCGACGTGCCCATCGC
ATTTCCGCGTCTGCAGACGTTAGATTCCTCCACACGTCTTAGGGTACACT
TTTGGAGCCAGCCCTCGGGCTTGGAGAACTGCATCTCTTTGATTCGGTGC
AAGGCTTACCTTCATGTTGAATATGTTGGGTGAAATTGGTTCAAGGGGGT
ATCAGGGCGAAAGCAGTCTTTTGGTCGCCTCCTGGATCTCCCGGATTAGG
GTTCAGTAGGAAGGAGGGTGTCCGCACGCGGGATTGTAACAGTTCAAGGG
CAAGAAGGGGTAGGATGCGCTCCACAGCAACTGGTTGAAGGGGTATGTGG
GGCCTAGAAGTTGGTTCCTGGGGGATGACAACGCAATGCACGAGCGGAAG
GATTATGTTCTGTGACCGTCGTGGATCATGCTCCGGGTGTCTCGGGCGAA
GTGGGAACTCATTCTTTGCTGTGCAAACCATTAAAGTTCATATTCGACCG
ACAATAGTCGCGGCGTCTGAGAAGGTGTTCTCGAGGTTATTCTCGCTCAC
TGGTGAGGTCCCGTCCCAACTACGGGCCTATTGAAGGATGGAAGCCACCG
TTACATTGCCGGTTACGGCGTGTGACCCCAGAGAGGGCTGTCGATCCCGG
AGCGGGGTAGTGGCCGTGGATTGTAGGGCATAGACGTTGGAATGTTGTGG
TGAGCTCGACCAGGTACTGTGGTTACCTGCTCTTGGTTGAGCGGCCCAAG
GGAGCAAACAGGCTTCTCCGTGTCGTGATAAGGCTCATGGACCATAGTAG
ATATGCCTGTTGGTGTCATGGTTAAAGGTTAGAAGATTGTGATGGAATCA
GCATTCAGTTCTTATCCATTCGGGTGTGATCCCTGATCAACCTACTGTTT
GACATTCTTGTGACGGACCTGTGCTTGTGGCTGATGGTGGCTGGTGTATG
TGGTTGTGGATCTTGTGCCCTACGTTGGGTGATAATGCATCTGTGAAACA
AGGAGTGAGTTCTGTCGTACGGTGTGTTCAACACTGCGCAATATCTTAAA
AGATTATTTCCGTTAATGTGTTGCAAGCATCAACCCTCAACACCTTGCTA
GCGAATGAAGAGTAAGTACAATCAACATCACTAGACATGTTCAAGGTTAT
TGAGTTGGATGGAGCCTTCCGCTTGATCCTGAAATTGTGTCTTTTTGGAG
TGGATTATTTTCGTCATGAATCAGCGCCCTCCGTTGGTGAATGTAACCAG
AGG
back to top

Coding sequence (CDS) from alignment at D-dichotoma_M_contig1103:623..9275+

>mRNA_D-dichotoma_M_contig1103.908.1 ID=mRNA_D-dichotoma_M_contig1103.908.1|Name=mRNA_D-dichotoma_M_contig1103.908.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=564bp|location=Sequence derived from alignment at D-dichotoma_M_contig1103:623..9275+ (Dictyota dichotoma ODC1387m male)
ATGCACAACGCCGATCCTCTAACGTACAACGACGGCATGGCTACGGAGGC
ACAGATGCACAACGCCGATCCTCTAACGTACAACGACGGCATGGCTACGG
AGGCACAGGCATACGCGGACTCCCTTGCCGCCTCGTGCGGCGGGCTCGTT
CACGACAGTACTACTGCGGATGGCGAGAATCTAGCGTACTGTGCCACTGC
CCCTTCACCCGTAGAATCATGCGCCTCCGGATTGGACGCCACTCCACGCT
GGTACGATGAAGTCCAATTCTATGTACCGGGGAGACCGGAAGCAGCAGCG
ACCCCGACGAGGCCATTGGGCACTTTACCCAGGCATACGCGGACTCCCTT
GCCGCCTCGTGCGGCGGGCTCGTTCACGACAGTACTACTGCGGATGGCGA
GAATCTAGCGTACTGTGCCACTGCCCCTTCACCCGTAGAATCATGCGCCT
CCGGATTGGACGCCACTCCACGCTGGTACGATGAAGTCCAATTCTATGTA
CCGGGGAGACCGGAAGCAGCAGCGACCCCGACGAGGCCATTGGGCACTTT
ACCCAGGTAGGTAG
back to top