mRNA_D-dichotoma_M_contig1101.903.1 (mRNA) Dictyota dichotoma ODC1387m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dichotoma_M_contig1101.903.1
Unique NamemRNA_D-dichotoma_M_contig1101.903.1
TypemRNA
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Homology
BLAST of mRNA_D-dichotoma_M_contig1101.903.1 vs. uniprot
Match: A0A6H5KRG7_9PHAE (GP-PDE domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRG7_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 1.030e-29
Identity = 59/72 (81.94%), Postives = 66/72 (91.67%), Query Frame = 3
Query:  567 RLGVDVIEFDVLTTVDGVVICHHNPLVEETGEWIQTLTLAQVRKRFAHNVSTFEEMLQEEVLVESGVHLYVD 782
            RLGVDVIEFDVLTT DGVVICHH+PL+EE+GEWI+ LTLAQ R+R  HNVSTFEEMLQE+VL ESGVHLY+D
Sbjct:  142 RLGVDVIEFDVLTTSDGVVICHHDPLIEESGEWIENLTLAQTRERLKHNVSTFEEMLQEKVLSESGVHLYID 213          
BLAST of mRNA_D-dichotoma_M_contig1101.903.1 vs. uniprot
Match: A0A835YQF6_9STRA (PLC-like phosphodiesterase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQF6_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 1.960e-9
Identity = 51/128 (39.84%), Postives = 66/128 (51.56%), Query Frame = 2
Query:  233 LSHDLMSSVLVFLSIRELLEWRAVT-------NSTKR----IWASSDHVLQVARRLRAELLHGRELLKHVLLL-----KPSPRISGDMPMAHRDVPPSRWRACLNIGHKGANGHAKGNTMASYIKAVE 568
            L  DL  + L++L  R LL W AV+       +S+ R    I+AS  H  +  +RL  EL H ++ L HV  L     KP+P        A    PP R    LNIGHKGA GH KGNT+ S+ +AVE
Sbjct:    1 LHADLQGACLLYLDTRSLLRWAAVSRGSFSTGSSSNRNFNGIFASQGHAQRHIQRLLLELHHSKDHLHHVSQLAGHSIKPAPPAWATAAGATA-TPPKR---VLNIGHKGAEGHVKGNTLDSFHRAVE 124          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1101.903.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KRG7_9PHAE1.030e-2981.94GP-PDE domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A835YQF6_9STRA1.960e-939.84PLC-like phosphodiesterase (Fragment) n=1 Tax=Trib... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig1101contigD-dichotoma_M_contig1101:221851..234925 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons4
Model size784
Cds size555
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig1101.903.1prot_D-dichotoma_M_contig1101.903.1Dictyota dichotoma ODC1387m malepolypeptideD-dichotoma_M_contig1101 222008..234853 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927615.8505177-UTR-D-dichotoma_M_contig1101:221850..2220071622927615.8505177-UTR-D-dichotoma_M_contig1101:221850..222007Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1101 221851..222007 +
1690798062.938848-UTR-D-dichotoma_M_contig1101:221850..2220071690798062.938848-UTR-D-dichotoma_M_contig1101:221850..222007Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1101 221851..222007 +
1622927615.9193716-UTR-D-dichotoma_M_contig1101:234853..2349251622927615.9193716-UTR-D-dichotoma_M_contig1101:234853..234925Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1101 234854..234925 +
1690798062.9936008-UTR-D-dichotoma_M_contig1101:234853..2349251690798062.9936008-UTR-D-dichotoma_M_contig1101:234853..234925Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1101 234854..234925 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927615.8689616-CDS-D-dichotoma_M_contig1101:222007..2221741622927615.8689616-CDS-D-dichotoma_M_contig1101:222007..222174Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1101 222008..222174 +
1690798062.9494457-CDS-D-dichotoma_M_contig1101:222007..2221741690798062.9494457-CDS-D-dichotoma_M_contig1101:222007..222174Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1101 222008..222174 +
1622927615.8835921-CDS-D-dichotoma_M_contig1101:229031..2292291622927615.8835921-CDS-D-dichotoma_M_contig1101:229031..229229Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1101 229032..229229 +
1690798062.9617352-CDS-D-dichotoma_M_contig1101:229031..2292291690798062.9617352-CDS-D-dichotoma_M_contig1101:229031..229229Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1101 229032..229229 +
1622927615.8960645-CDS-D-dichotoma_M_contig1101:232083..2322181622927615.8960645-CDS-D-dichotoma_M_contig1101:232083..232218Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1101 232084..232218 +
1690798062.9765842-CDS-D-dichotoma_M_contig1101:232083..2322181690798062.9765842-CDS-D-dichotoma_M_contig1101:232083..232218Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1101 232084..232218 +
1622927615.9091558-CDS-D-dichotoma_M_contig1101:234798..2348531622927615.9091558-CDS-D-dichotoma_M_contig1101:234798..234853Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1101 234799..234853 +
1690798062.985046-CDS-D-dichotoma_M_contig1101:234798..2348531690798062.985046-CDS-D-dichotoma_M_contig1101:234798..234853Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1101 234799..234853 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dichotoma_M_contig1101.903.1

>prot_D-dichotoma_M_contig1101.903.1 ID=prot_D-dichotoma_M_contig1101.903.1|Name=mRNA_D-dichotoma_M_contig1101.903.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=185bp
MGEVENESNALQLASAKDLEFWPVPLSHDLMSSVLVFLSIRELLEWRAVT
NSTKRIWASSDHVLQVARRLRAELLHGRELLKHVLLLKPSPRISGDMPMA
HRDVPPSRWRACLNIGHKGANGHAKGNTMASYIKAVEARGGRDRVRRSHD
GRRGRYLSPQPSRRGNRRVDPNSYPCSSSEEVRA*
back to top

mRNA from alignment at D-dichotoma_M_contig1101:221851..234925+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dichotoma_M_contig1101.903.1 ID=mRNA_D-dichotoma_M_contig1101.903.1|Name=mRNA_D-dichotoma_M_contig1101.903.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=13075bp|location=Sequence derived from alignment at D-dichotoma_M_contig1101:221851..234925+ (Dictyota dichotoma ODC1387m male)
CAGTTCGTCACTCCATACCCAGGCACTCTGAGCCGATACGCCTCTCCTTG CAGTCCGGACTCTCTGGTGGCCAACTTGATCAGTGCTCTGAACTCTCTGG TCAGAGACTCTTCCCGAGCAGTCTTTGGTTATCGCTCCGCACGTCGGAAC GCGAAATATGGGCGAGGTGGAAAACGAAAGCAATGCTCTTCAGTTAGCGA GCGCCAAGGATCTGGAATTCTGGCCGGTGCCTTTGTCCCATGACCTAATG TCATCTGTGCTGGTATTTTTGTCCATAAGGGAACTGTTGGAGTGGCGTGC GGTGACCAACTCGACAAAGAGAATGTGAGTCCTTGTCGAGGCTCCCATCT GTATACGTCCCTTTTAGATTCGGGTGAGGTGATGGCATGGATTCACCTCC TCGTACTCACTCTGAGCAATCTGCACCCCGAGTACGGATGCCCTGCGGTC CAGCTTTACCACCATTATGATTCCTTGGATATTTTACCCTGATCGAACTC TCCTGAGGTGGTAACTTGACGTGATGCAGGCAGTAGTGATCTCACTCTCT CGGGAACAACGAGGTGCTTGCAACGAATCTGATGATTCACCTATTGATGA TCTTCGACGAGAAGACCCTTCGACGTACAATAATTATACATGTTGCTCAG TCCCGCAAGAGCGTTTCCAATAGACCCAGCTCGCTCGTGCATGTAACAAG GTACCGATGGTTGCGGGATCAGATTTCAATCCTCCTACACATCGTCGACA CTCCAAAGGAGGGCGGAGCTGGCGCATCCTTGGCCTCCTCGTCTTGGTGT GGTGTCTGTCCGTTCGGTCGGTCACGCACATACAGAGTTACAAGCCCGAA TGCAAGCTCGGGACGGAAAGCGCATCGCTTTGTGCTCGAACAATCGATAG TCAATCTTGACCTTCGGACCATTCAACAAGAATGTGAACTCTAGCCAACG ATGATCGGGTTTTTACCCCGAACGAAGCTCTCGTCGTCGGTGTGACGAAG TGCCCGCCCTTCCCCCTGAGAAGGGCAGGGAACCTCTTCTTGCCCCGCGA TTATTGGATCCCTCCTGCAGTACACTGTATATACAATGCCGCGTGGATCA GCAAGTAGTCGTCGTTCATGTTTATCTTCTTCTTAGAGTAACCGCTGATT CCTCAAGTCGTCGCAACGTTGAGAAACCTTCTCCTATTGAAGTACTGTTA ACATGACCCTCCACTCGGAGGAGGACGAGGAAGAGTAGTATCGCGCTTCG AGTCGTACCCTCTTCTAGTAGCTCTGTTCCCACCGGAGACATCATGCTCT GTCCGAGGAGGTGGCCAGAGTCATGGCAATGCTGCCCGCTGAGATACGCT TCCCTTGTAGGAGCGAGTGACCCCACCACTGTTCTCTCGGCGAAACGAGA CGCCTGAAGTAGAGTTAGGTATCGTCGGGTACCGAGGGTCATCGCTTGCT GACGTTGATCGCAGGGAGAAAAATGCCTCCTGCACGCTTGTTACGTCGTC CTCGGCAACCTCAGGATCGAAAAGAATACCGTGATGCAGGTTATCATCCT CGGGCGGGTTGGCGTGATCGAAGGAACCCGTTTCGTCTTCTACGGCGGCG GTGGTGGGGGTACCTGCCCTCCTCACGTCTTGAATCGTAGGAGGATTTCT TGAGCGTGGCGTGAGAGAATTGACGAGCGTCTAGAGGATCAACAAACGAA CGAACGAACGAACGAATGAATGAACGAACGAACGAACGAATGAACGCGCG TACTACATGGATTGAATGCCGTGCTAGCGCCCTCCACTGGGGAGAGAAAG CTTCTTCGTACTTGTGTCCCGAGAAGCGTGGATATAGGAGGGCAACAACT ACTGTTGAGTGGGAGGAGGCAGGTGTGTCGTGTCATATGGGGATGGAAGA AACGCTATTGTCGAGTGCAGTAGTAGCCGAAAGGAGGAGCATTCGTTTGT GCTTCGCAAGACTTGCGCACCCCTCCCCCCTCCTCCAACCCGATCGTTTG TTTTCCCGCGGGGTCAATCGGGCTTCTGCTTTCGCCGCACCTCCGTGCCT CGAAAGCCATCATCCGCGCCGAGGGAGAAGGTGGTAACGCAGAGGCACGG GATGACCCTCCGCTCGGAGAAAACGCAGAAGGCCGTTCGTTCGTCCGTCC GTTCGTTTGCCCTCGCGCGCGATATCCTCCGCCCTGCTGCACCGGGGGGT ACGGAAGGCTCAGTCAGGCCGTGTTGCTACGACATCGAGTCGGCAGACGT TCCGTCGCGGACGATCGATGGCTGGCGGCGTGTTCGTACGGTGCTACGGT CGTAATAGCTGCTACGGTCCACGTGAGGTTTCGTCAAGTCCCTCATGGTT GTTTGTGAGCACATCTGCACGGGTGGTGACCGTTTCGCCAATCAATCGTC GGAGGCAAATCAGAGGGGCAAGATGGATTTACTACACGAAGTCAGCCCTG AGTTAGTGACAGTCTGTTTGGGTCCGAAACCCGGCCATATGCCCCAAGGT CGCCATCCCTGTAGGTCAGTCGGCCTGACCACCCTCGTCCAGGTCAGCAG CCCTTCTATCTCTCTCTCTGCTGCACCGAGGCCGCTATCTACTGTATCTG CTGCAGTATCGTTGGCGCTCGATTCGCTTCGTAACTTCTCCACATGGAAA GGTCTTGCCCACGATGGCCGGGAAACTGTCCGCCCTTGTGCATCTCTTAC CTCCTGAATTTGTCCGGGGATGGATGATCCGCTCGAAGCAGCGTCGATAC TTTTGAAGGAAACATCCATCTCTGCTTGGATATATCCCAGTCGTCGTCCC AACCCAGTCGTCTTTCCTCCGAACATCATCACCCACCGCTGGACGCGAAC AACGTCAGAATGGAGGAAGAGGACGAGGAGGAGGAGTGAAACCCGTACGT TCCATGGAGTCTGGGCTGCCGCTATATCTCTTGATGTCCAGGATAATAGG GTAAGAGATGAAGAAAACGACGATGGATGCAGTACTTAGAACCATAAAAA GATTGAGATTCGAATGATTGCATAGTAAATCCAAGTTAATTCGGTCTGAA CATTTGTTTTTGTTTTTTTTACTGTCAAGTGCTCTATTTACTACGCCCAT CGCTCTACGCAACAAAGCACTAATCTTGGGATCCATAGTACTGGCATTTA GTACGAAGTCGGTCGGATCTTCATACATATATATATATATATATATTTGA TAGTTACAACCACTGTAGGTACAGTACCGCGATGCCCTACAGCCGAGTCG TGAACACGAGGAGGTGAACGCCTCCGCCCGTCGGGAAACGAATCACATTT CTTCGGCAGACGACAAGAAGAACGAATGATGTACCACGTCGCGGGGCCAG TCGTCGAATTTCAAACATGCTGTTCGCTGCAAGAGACATTTTAAGGGTTT TCCGAGGTCCATCGACCGGCGAACATGCGACGACAGTCGACCGGACCGTA GTCGTCATTTTCACCCTCCGTCGAGTCGCCCACTATAACCCCAACCTCCA GGGAGTTCGTCAGTTTCATCTGCTCATGAAACTGCTACGGCCCTACGGCG CGGATGAACGTTCCATCTCATTTCGTTTCATCTCATTTCGTTTCATCTCA TCTCATCTCATCTCATCTCATCTAATATCATCTCATCTAATTTCATCTCA TCCCATTTCCTTGGTCCATTGCATTTCACTTGACTTCAATCGTGTCGATC ACGCGCTCTCATCCAAACCCCGGGGATGGCTGCCTTCTTCCCCGTTGTAT TGCGATTGCATAGCTGCCCAAAATCGTTAACACCGTGGATCATGGAATGT TTGACTTGGATTTTGTATAAAGTCATCCAATTAAAGATTCTTTTTGCTTC GATTCGGATTACTGTTATGAGCTCTTGTCCATCTGTCGTATTTAGGTCGG CTGTGAACCTCAGGGTTCCTGGGATACATTAGATTTGACTCCATGATACA GTATGGACCAGTCGCTTTTCGTCTATATTGGGTTGGGATGTTCCATACGG GATGGTGCCCCTGCTGAAGCGGTCGTTCCCCAGTACAGAGTTGTACCGCT TGCCGAATATGCTTTCTGGGCCAGTCCTCTATCGTTGCCCCTTGTCGACT GACACGCAGGCTGTGTCAAGGGTCGACACTGTTACAGTATGTGATGTGTA TGTTGTGGATATCATATTACCCTCTTGATTTGAGGTGGGCTCATCAGCAA TGAAGTTATTCGACGGTTCACCGTGGGATGCCAGCTGCATGTTAAATCTA CGGTGGACACATGCTCAAGACCTCGTGATGAACAAGCCGCTCGTGTAAGT CACCGCAGCCAAACAAGGCACTGCAACCAGAACCTACACTTTCTGCTAGG AGGAAACTGGCTTGAATATCCAGCCCTCTTATCCTTAACATTGCTGTACT GTAGTCGTCCCCTTAAGTAAGGCTGCTTGTCAAGGAGAGCCGTCGCGTTC CTCATGGCCGCGTTATGCAAGGCTTCCTGTCGACTGTGATTGGTGTAACG CTGGCTGCCCTCGTGCTTTGGTTGGTCCGGGGAAAAGTGGTGCTAGCAAC CGCAAACCGCGGGAAGCTGGCGAGAGGGGCTAATGGAGCGCGGAGAGACT CCCGGGCGCACGAACCTTCTGTGTCAACGATGCGGGGGACTCGCCCCACC CCCTCACCTACGGTAGACGTGTATTGCCGTAATCCAAGCCATAACAAAAT GGATAGTTGGATTGGGTACATACTAAATCCAAGTAAAATATTTAAAGATT CATTTTGTTACGATTTGAATTATTACTGTATTGCGTCGCGGTGTGTTGCA GTGCGATCGCGGCGGTGTGTGTGTGCATGCATGTCGTCTTCGGTAGCGAA GAAACGCGACTATATCATGCAAACCTGCAAGTCACGGGGATGGGACGCGC TATTGCCCCGTAATCCATGTATCGTAAGTAGGATGTGCAATCCAAGAAGC TGTACTGAAAGAAAAAGAAGATGGATTCAAGTGTAGTTACACAACACAAT CATGTGTGAAAGGGATCCTAACCCTAGCCCCCCCGAATGCATATAATCTA AAGGGTACCGGCTCTAGAGGCAGGATTATCTGCAATCCTTCGTATTTCAG TATTATACTATCGTTAGACCATGTTTCTCTCGTGTAGTAATGCATGGACT ACGAATGGTGCTATTGTCGCGACTCACACGTCGCTGGGAGACGTGGGGTG TGGAGCGTGGCGAGGGTGCGCCGTCGATAGGTCTGATTTTTCTCGGAAAT TTTCTATAGTGGGGGCAGCAATAAAAGAATGGCTCTTCGCCCTTTTTTAG TTGGATTTAGTGTGTAACCAAGCAAAGAACCATATTTTTATTGCTCCCCC AACTGTACTTGACGGTGCGAGGCGTACGGCGGGAGTCAAGGTGCTGCTGT AGGTCAGTGGCGCGTGCGGGTACATCGACGGGGCCCGAACTGTACCGTAT GTTGCGGTATGAATTGCTCGAAGAATCATCTTGAACGACGCCACCGTCAT TGGATGCAATGATCCAACGACCCAGGAAACCTTATTATTGTAGAACTCTC TTTCACTTTGGAGGGGTCTATTTTTCTCTCTTTGTTTCTATGAGTCAGTC ATCTTGCGTGCTATTTTTCTATCCGCTTATTCCCTTCAGGTTTCATTTTT TTAAAATCAAACTCAGGCCAATTGTTTAGCGGTTCAAAATCCCGGCCGGT TATAGCTTTTCAAGGGTGTATTCTGTAGGGTATAACAGAGTGTACCCGGG GGTATTTCTCCGGGTAACGACCCGTACCCGATAGTTCAACGACAGATTTG TACCGAGATTTTTATTGAAAGTGTACAAATCTCAGAACTATCGGGTACGG GTCGTTACCCGTAGAAATACCCCCGGGTACACTCTGTAATACCCTACAGA ACACACCCTTGCATTATGCGTTACAGTCGAACCTCCAGATGAAGGCCTCC CTTCCCTGAGTAGCGCGGTACCTCACATGAAGGCCATACTTTCCCCAACC TCAGGTTTTTCGTTCGATTGCGATGAAGTAAAGAGAAACGAGAGATATAA TAGTAGCCCGCGGGGTCGAAGCATCACTCGACCGAATATTCGTTTCAATC CCTCTTCGTTTCAACAACCCTGAATGGAACCAGCGAACGCTTATCCCAGT CGTGCTTCGGTGCTCCCCGTGTCCCCCGACACGCCAAAGCGCGCTGCCCT CGGGGTTCCAAGCTGACCGTCCCGTGAAGTTGCTGAAGAAAGTACGATGG AGGGTTTCGCGAGGATGTCTTTTTGTTTTCCGCCATCCACGTCGTCTTAT TGGTACAGTGCTTCACAGCGTAACAGAAGGATTAATATAGTGTAAGATGC AATTTGCTTGGATTCAGTCTGTAAACCGTCGGATCAACAATCTACGTTTG CTGTGATTCGATGTGAAACCAACCTTATTGGCGTGCACGGTACTCGCAAA CCGTAACATAAAACATGACGTTTTTTTTTCAACATGATTTACTTGAACTT AAAGAGAATTCGATCGAATATCGAACAGGTTACTACGGTATTGGAAGTAC TGTACTAGCAGCGATGTTGTATATCATTTGTCGGGTCAGGCATTCAATAA GGTGAAGGAGAACCGAGCAAGGATAATATAGGCAGGGAGAACTCGAGCGC TTCGCAGGAGCACCGCATCCGGATGACCTCCTGCGTCGCAGGGCGCCGTG CACGGCGCCGTTTCGACGATGATGGCCATCCGCATACAGTCGAGGACCAA AGTTACCATCGCCATTTGCTGATGTTAACTGGGAAATTATGCGAACGCGG CAAGTACAATCCATCCATGAACGCGGCAAATAGCTACAGCTCCGATCTCT GTACAATATAGTACCGTACTGCAGTTTCACCTGCACCTGCTCATCAAACC GCTTGCTCAACGGCGCGGATGAAAATTTGATGCTGGGGATCACCCTAATC ATCCCAAACCTCTTTTTGTGTTACCATGATCTGATGTTAACTTGGGTCCG CGCGCTACTCGAGAAGATGTTAACTCAGGTCCTCGACTGTAAAACGTTGT TGGCACTAGTCGCCGTTCGAGATGGCCTTCGTCCCACCGATCTCGTCAAT CGATCACCGCCGCCCCGGATTCGTCACGCACGCACTGCCCCGTCTCCAAA CGCGCGCGCGCGCGTGTGTATGTATGCGCAGCTGGGCCTCGTCCGATCAC GTGTTGCAGGTCGCCCGCCGTCTCCGAGCGGAGCTGCTCCATGGCCGCGA GCTGCTCAAGCACGTGCTCCTGCTCAAGCCGAGCCCGCGCATCAGCGGGG ACATGCCAATGGCACACCGCGACGTGCCTCCGTCGAGGTGGCGGGCGTGT CTGAATATCGGCCACAAAGGCGCCAACGGGTGAGAACCGATCGGACTAGG ATCTGGGCTGCAGGTAGGCGGGTTCCACGCGCGTCTGGCTTTTCGGTTCG GACAAGATAACCGCCCCCCCCGGATGACTCGGTTGTTGCCGTTAGCATTA CCGTTACCGTTACCGCTACCGTTACCGTTACCGTTACCATTGTGTACTGC ACGCTCCGACCAAGGAACGTTCTCGGAGCGTTCTGTAGGCGCACAGGATC TGCTCGGAGCAGAGTCATGGGATAGTTTTGCTTCAACCTCGCCGTGAAAG AGTTCATTTTTACTTGTTTGCTTTGGTGTACCATTGTCCGCATCAACTTT TATCGTGATATTTTTTTCTTGTTTTCTGCACATCTACTCCATGATTCCCA TCTCTTCTTTTCTCCTCTTTTCCATTCTTTTTTCTATTTGTTCCGCCTTT TTCTATTTGTTCCACCTTTTCCATTTGCTCCCTTTCATTTTTCCTCTTTT TTCCTTTTTTTTCTTTTTCCTCGTTTTTCCCTCGTTTTTCCCTCTTTTTC CCTCTTTTTCCCCCTTTTTCCTTCTTTTCCCTCTTTTTCCCTCTTTTTTC TTTTTCCTCTTTTTTTTTTTCGCGAACCCTGCTCGTGTCCCCGCGTGGGC CAGGGCAGTGGCGCCTAAGGGGCTCTCACTACCGTGACATCAAACATGAG CGATATGAGTCGTACTTTGTGCTCTCGCGGAACAGGGTCCCATGGTCGGT GACCACATCCTTGCGGAGGCGTCCTCGGCTATGTGCCGTCTCATATTTTA TTGGTTGGGGATTACTCCTCATGAGGGATTTGTGTGTTTGTGTGGCAAGA TATAGACGTAGAACACTGCCATGTACAGTGTATGCTATGGTCTCACTGGG GACCTCAACAAATTGAATGAACTCAAGGCTCCCATAGGGTGACCATATGA CTTATACCACGTGTGTGTATATGGGCGTCATTAGTCACATAAAACCAGGC TGTGACCCTGCTCTATATCAGACAATCCCCAACATGTACATCACTTCTGT TGCAACATATATACGTAGGACACTGCTGTGTCTATTCTGTTACTCACTGG AGGCCTCAAGAAGATGAACGTACTCAACGCTTCCATAGGATAACCAGACG ACTCCTATCACTCCTAGGTACCACACCGAGATCTTAAATCGCACCGAATC CAAGCTGTGGAAGATCGATTACCATTTACAGGTAGTGGACGACACGTAGA AACTGCGGCTACGGGAGATCCGGGGTCGTCCATGATCCGGGGTCCATGGA CTCCCTCATTTGACAACATCACTTGGGAAGGCTCACTCTCGCCATGCTGG CTCGCTTGGGCAGCGAGTTACAAAGGTCATCTGGCTTGCTGCGCCAACGC TCTGGGATATGCTGTCGTCCGACGCATCGGAGCATACGATACGCGGATAC TTTTTGCGTCCCTATCGATAGCCTGCGGCGCAGTCTGCCCGTCTCCCACG CGCGCGCGTGTGTGCTACACCAGTTATAAACGACCACCCTGTGTCCTGGC TTCGGTCCTAGACCCGTCTTTTCGGTTTAGCTAGATCCACCTGGGGAGCT CTTCGCTTTAGTTCCTCTACATGCTCTATCATGCTCTATCATGCCTCAAC TTTTGAGACCTGCACGTCTGTTTTCAGTCTTCACATAGGATACATTTATC AAGAACTCCTCTCGTCGTATCATCGCCCGTCATCGCCCATCACGGCCCAG GATCCAACTGATGTGCGCGTTTGGTTTCAGGAGAGCGGGATACTTTTCTT GAAACGTTCTCGGTGGCCGTGAAAAGGCGTCATTCGCCGCCCTTCGCCGC CCTTCGCCACCCTTCGCCATAGCCTCGTACGACAAGCGAGGGACCTCGTT GGGCGAGTGCTCACCGTTTCGGTTTCGAACGCGACCCCGAGAGCCCGCCC GGCAGAGATAGCCTCCTGTCCCTATTCGAGGGTCCTGCGCGGGGCTTGCG CGGGCTTCGAGCGTCGTGATCCGTTGGATCAACCAGGCTTGCTTGTTTCT GAGCGGTACCAAACGGGCCTCGCTGTTGAGGGGCTTTGGGATGTCATTGG GTGGGCTCACGGGTAACCTCGTTGCTCCGCCGTCGTGTCATGTCATGTCA TCGTCTCGCGTCGAACCTCATAGATAGGGATCCCAATCGTAACAAAAATG AGGTTCGACCGGCGTCTCATTAAATTCAATTAAATGGTTCAGCATCGTAG CAAAATGGGGATTCGACTGGTGCCTCATTAAATTCAAGTAAATGGATTAC ATGTTAATTTTGTTACGGTTTGAAGTACCGTAACTAATAGGAAAATTACT GCTGGGCCTCTTTCCGGGGAATAATTCGGAACCAAACGGAACAACTTCGG GCGTTCCGGGTGTCAAAACACGTCTGGATTCCGCCGACATTCCTGGAATT TTTCTGAACACGTTCGACTTTGGGGAACAGTCGACCCCTCAGACTAAAGA GCCCTATAGTTTCCATACTTAACTCCTATAGTACCTTTGTGGTGGTCTTA ATATGAGAGAAGGCCCTAATCATGGGGTGTGGTGCCTTAATTTGGCGGGT CGACTGTATCATTTTCTTGTTTTCTGACGGGTGTGATCGCGCTTCTATTG CTGTTCGAGTCTCCCGGGCTCTGCCTGGTGGGGGCTCGTCTTTGCGACGT GGGCGGTAGGCATCGCTACCCTGTTTGCTTGAGCCGTCCGTCACCTCGTT GTTGATAACTCACGGCGATGATTGGGCGGAGATACTTCGGCAGGCGACGT AGGAGTGCCGTGGAGGAAGCGGGGTCTCCGGTGGTCGAGACCAATCGTTG ACGAGCGCAATCGCTGCCGCTGGGACGTTGCAGGCACGCTAAGGGCAACA CCATGGCGTCCTACATCAAGGCCGTGGAGGCTCGGGGTGGACGTGATCGA GTTCGACGTTCTCACGACGGTCGACGGGGTCGTTATCTGTCACCACAACC CTCTCGTCGAGGAAACAGGTGCGGGAAAGGTTGACTGAGTACCGTACCGA GGGCCTTGTCGGTTGCCACGTGGACACGATCTCGTCCCCTCCGGCGCGTC GCCATGATCCGAGTGATTCGATCCGAGAGGGTGAGCTTGGTCTTGAGTTC TGTTTGACATACGCTTCTATCTTCGGTGCAGGGATACCTGGCAAGATACT CGCAGCGCCCGAAAGTTCCGACACCATCATCTCGAGGTCTCTAAATCATG CTTCCTGTCAGCACCAGATGTCCAGGATGACCTGTCTCCCGAAACAGCAC TCACTGTCCAGTATTTTTTCCAAGCAATCGCGATAATCATTGCCATCTAA CTCTTGTCGTGGTTCTAGCCGAAATCCAGCATGGTCTGTTCCCCAAGCAT CGCCATCCTGTTGAGGCCCTGAGATATCAACGTCATCTTGCTCTAGGTCG TATGTGTGTATGTGTATGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTG TGTATGTGTGTATGTGTGTATGTGTGTGTTTTACATTAGTCACATATAAC CACGCTGTGACCTGGTGTAGGTTCCGGCGACTCGCCTAACAACAGACACA GACACCATTTCATAGCAGGGGACACGTGGGCTACACCTCTTGCGATGCTC CGACTTCCAGGGCTGCGTCTCCCTGATCCTATGCATGCAGGTTCTCACCA ACAGAAGAATGTCACAGATGATTGTGTGTGTGTGTGTATGTGTATGTGTG TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTTTTACAT TAGTCACGTATAACCACGCTGTGACCCGGCGTAGGTTCCTACGACTCTCC TCTCACAACAGTCACAGACAGAACTTCATAGCAGGGGACACGTGGACTAC ACCTCTGGCGACACGCAGAGTTCCGAAGCTGCGTCTCCTAATCCTATGCA TGCAGGTTCTCACCAACAGAAAGAGTGCCACAAATTACTGTCTCCTTGGT TGCCACTCAGTCGAAACTGTTGGCCTGCTACGCCATCATGTCCCAGACAC CTTCCCCGCCCTTCCTCAGTTGACCCCTACTAAAGTTGGAATCTGTATGT TCAACAAGTGGGACTCTGCAAACGGGGAGTCTAGGTTATCAGTGCCGCCG AGCGCGCTTGGCGAATGGTGACGGAGAACGCGTTGTCTGTAGGGCACTCT CCGCGGTGGTCTCTCATTTGTCTTGGCAGTGTTGACGGCGGACGTAGCGC AGGCTACGGTAGGCGAGTGCCCGTTGGGTTGTCAGCGATAGTAGGCGCCG CAGCCTTCCCGTCTCCTTTGCTCGGATGGCGAGTTTTTCCCCCTCTCCCG CCATGAGGTAGTCTTCACTAAGCTCGGCCTTGAGCCTGCCCAGGTCCTTG ACAAGGTCGCCCACACTCGAGGAGTAGTCACCACATATGGAAAAAGCCAA AGGTAGGAGTTTATATGTGGGGGGCGGTGTGTGCCGCCATGCTTGGTCTT TTGGCTTGTGTGTGTGTGTGTGTTGTATCAATCACATAAAACCAGGCTGT GACCCGGCGCTGTATCGGACGGTCCCAGCACGTATGTACCCCTAGTGGGG AACTTCCTGAGAGCGTTGCTACTCCACTAACTCACCGCCGACTGAAAGAC GAGAAACGCCATAAAATGACCGAGACAACTCCAGCGGGGGGCTAGGCAAG GTAATCAAGCAGAGCCTCGTACCATTCTAAGAAAAGTGTGTGTGTGTGTG TGTGTGTGTGTGTGTGTGTCATTAGTCGCATAAAACCACGCTGTGACCAC GGCTCGATATCAGATAGTCCCCAACTCCTAGAGGACTCTCATGGGCACAT GCAGCGAACTTTGATACGTCTATGTGTGTTTGTGTTTTTGAGTTGGTCAC GAATAACCAAGGTGTAAACTTGGGTCATTTTTCAGCAAACACGTAAAGGA AACTCCACCGATCCATCATCTCGTGTTCTCCCAAAGTTGCTTCCTATCAA CACTAGATATACGGTCTCCGAAAGCAGTGCAATCCGGCCAACATCCCTAG CAGTCAATGCCATCGAGCCCTCTTACGATTGCAATTTGCTGTCTCGAGAT CTGGAATGGTTTGTTCTAACACACATGTGTTTTGTTTCTTTGTTTGTTTA TTTTACGTACTAGTCATATAGTCTATAGCCATATCAGCTTCAGACAAGTC ATACATCATACCCGATGGATCGTGGTATCGACCGGCGTACGTGCTCCTAG GAGAAGACACAGTTTTTTCGATGAAGTGGGCCAGGCAGGTTGGTCCATCT TGGCGTAGATAGGCGTGTGTCTCTTGAGGAGTAGACGCATCTCATCCCGC CTTTACGAAGGTATCAATCTGTCTGTGATCTACCTCTAATCGCTTCCCAA GTTTTGTGTGCTGTATGCCAGCCCATCACCCGCGTTGGTGAGTGTCGGGC ACGTCGCGTGCTCTAGGCTCGTACCCGGCGGTGCACTGGCACCGGGGGGC ATTTCGGGGGGCGGGGGCGGGGGCAGCGGGGATATCCGGGATTTGTCCCA TGGCGCCGCGATGCGACCCTCTGCCTTCTTTTATCGTCCCATGGCCAGGC GAGTGGATCCAAACTCTTACCCTTGCTCAAGTTCGGAAGAGGTTCGCGCA TAATGTATCGACGTTCGAGGAGATGCTGCAGGAAGAAGTCCTCGTGGAGT CTGGGGTGCACCTGTACGTGGACAT
back to top

Coding sequence (CDS) from alignment at D-dichotoma_M_contig1101:221851..234925+

>mRNA_D-dichotoma_M_contig1101.903.1 ID=mRNA_D-dichotoma_M_contig1101.903.1|Name=mRNA_D-dichotoma_M_contig1101.903.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=1110bp|location=Sequence derived from alignment at D-dichotoma_M_contig1101:221851..234925+ (Dictyota dichotoma ODC1387m male)
ATGGGCGAGGTGGAAAACGAAAGCAATGCTCTTCAGTTAGCGAGCGCCAA
GGATCTGGAATTCTGGCCGGTGCCTTTGTCCCATGACCTAATGTCATCTG
TGCTGGTATTTTTGTCCATAAGGGAACTGTTGGAGTGGCGTGCGGTGACC
AACTCGACAAAGAGAATATGGGCGAGGTGGAAAACGAAAGCAATGCTCTT
CAGTTAGCGAGCGCCAAGGATCTGGAATTCTGGCCGGTGCCTTTGTCCCA
TGACCTAATGTCATCTGTGCTGGTATTTTTGTCCATAAGGGAACTGTTGG
AGTGGCGTGCGGTGACCAACTCGACAAAGAGAATCTGGGCCTCGTCCGAT
CACGTGTTGCAGGTCGCCCGCCGTCTCCGAGCGGAGCTGCTCCATGGCCG
CGAGCTGCTCAAGCACGTGCTCCTGCTCAAGCCGAGCCCGCGCATCAGCG
GGGACATGCCAATGGCACACCGCGACGTGCCTCCGTCGAGGTGGCGGGCG
TGTCTGAATATCGGCCACAAAGGCGCCAACGGCTGGGCCTCGTCCGATCA
CGTGTTGCAGGTCGCCCGCCGTCTCCGAGCGGAGCTGCTCCATGGCCGCG
AGCTGCTCAAGCACGTGCTCCTGCTCAAGCCGAGCCCGCGCATCAGCGGG
GACATGCCAATGGCACACCGCGACGTGCCTCCGTCGAGGTGGCGGGCGTG
TCTGAATATCGGCCACAAAGGCGCCAACGGGCACGCTAAGGGCAACACCA
TGGCGTCCTACATCAAGGCCGTGGAGGCTCGGGGTGGACGTGATCGAGTT
CGACGTTCTCACGACGGTCGACGGGGTCGTTATCTGTCACCACAACCCTC
TCGTCGAGGAAACAGGCACGCTAAGGGCAACACCATGGCGTCCTACATCA
AGGCCGTGGAGGCTCGGGGTGGACGTGATCGAGTTCGACGTTCTCACGAC
GGTCGACGGGGTCGTTATCTGTCACCACAACCCTCTCGTCGAGGAAACAG
GCGAGTGGATCCAAACTCTTACCCTTGCTCAAGTTCGGAAGAGGTTCGCG
CATAAGCGAGTGGATCCAAACTCTTACCCTTGCTCAAGTTCGGAAGAGGT
TCGCGCATAA
back to top