mRNA_D-dichotoma_M_contig110.873.1 (mRNA) Dictyota dichotoma ODC1387m male
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Overview
Homology
BLAST of mRNA_D-dichotoma_M_contig110.873.1 vs. uniprot
Match: D8LQ20_ECTSI (Proteasome subunit alpha type n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ20_ECTSI) HSP 1 Score: 455 bits (1171), Expect = 6.740e-153 Identity = 227/251 (90.44%), Postives = 243/251 (96.81%), Query Frame = 2
Query: 596 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILAKDGIVMAAERKVVSKLLAPAKTSEKTYRLYENASCVVAGLTADANLLVNNARLSAQRYMYMYGENMPVEQLVKQVCNYKQAYTQFGGLRPFGVSFLFTGWDEHHGFQLYHSDPSGNYGGWKATAIGANNQARAGKALLKSEYEEGSSVEDCLKLAVKVLNKTMDSTTPSPDKMEFTTITRVNGKVVHKILTDEETDKVLKEVEPETSTQGDV 1348
MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILAKDGI+MAAERKVVSKLLAP+KTSEKTYRLYENASCVVAGLTADANLLVN+AR+SAQRY+Y YGE MP+EQLVK+VCNYKQAYTQFGGLRPFGVSFLFTGWDEHHGFQLYHSDPSGNYGGWKATAIGANNQA GKALLK++Y E SSV++CLKLAVKVLNKTMDSTTPSP+KMEFTTITRVNGK+VHKILTDEE+DK+LKEV ET+TQGDV
Sbjct: 1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILAKDGIIMAAERKVVSKLLAPSKTSEKTYRLYENASCVVAGLTADANLLVNHARVSAQRYLYQYGEQMPLEQLVKEVCNYKQAYTQFGGLRPFGVSFLFTGWDEHHGFQLYHSDPSGNYGGWKATAIGANNQA--GKALLKTDYVEESSVDECLKLAVKVLNKTMDSTTPSPEKMEFTTITRVNGKIVHKILTDEESDKILKEVAAETATQGDV 249
BLAST of mRNA_D-dichotoma_M_contig110.873.1 vs. uniprot
Match: A0A6V1N066_HETAK (Proteasome subunit alpha type n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1N066_HETAK) HSP 1 Score: 391 bits (1004), Expect = 7.530e-128 Identity = 193/251 (76.89%), Postives = 224/251 (89.24%), Query Frame = 2
Query: 596 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILAKDGIVMAAERKVVSKLLAPAKTSEKTYRLYENASCVVAGLTADANLLVNNARLSAQRYMYMYGENMPVEQLVKQVCNYKQAYTQFGGLRPFGVSFLFTGWDEHHGFQLYHSDPSGNYGGWKATAIGANNQARAGKALLKSEYEEGSSVEDCLKLAVKVLNKTMDSTTPSPDKMEFTTITRVNGKVVHKILTDEETDKVLKEVEPETSTQGDV 1348
M+RRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVG+LAKDGIVMAAER+ VSKLLAPAKTSEK YR+ ++ S VVAGLT+DAN+L+ ARL++QRY+Y YG MP+EQLV++VCNYKQAYTQ+GGLRPFGV+F+F GWDEH GFQLYHSDPSGNY GW A AIGANNQA GK+LLK+EYE+ S+VE CLKLA KVLNKTMD+TTPSP+KMEF T+ V+GKVVHKILTD ET K+L+EV+ E ST+GD+
Sbjct: 1 MSRRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGLLAKDGIVMAAERRTVSKLLAPAKTSEKVYRIDDHVSAVVAGLTSDANILLQQARLASQRYLYSYGAPMPLEQLVQRVCNYKQAYTQYGGLRPFGVAFMFAGWDEHFGFQLYHSDPSGNYSGWFANAIGANNQA--GKSLLKNEYEQDSTVEQCLKLAAKVLNKTMDTTTPSPEKMEFFTLQMVDGKVVHKILTDAETAKILEEVQAEVSTEGDM 249
BLAST of mRNA_D-dichotoma_M_contig110.873.1 vs. uniprot
Match: A0A836CL31_9STRA (Proteasome subunit alpha type n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL31_9STRA) HSP 1 Score: 384 bits (985), Expect = 5.400e-125 Identity = 198/252 (78.57%), Postives = 219/252 (86.90%), Query Frame = 2
Query: 596 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILAKD-GIVMAAERKVVSKLLAPAKTSEKTYRLYENASCVVAGLTADANLLVNNARLSAQRYMYMYGENMPVEQLVKQVCNYKQAYTQFGGLRPFGVSFLFTGWDEHHGFQLYHSDPSGNYGGWKATAIGANNQARAGKALLKSEYEEGSSVEDCLKLAVKVLNKTMDSTTPSPDKMEFTTITRVNGKVVHKILTDEETDKVLKEVEPETSTQGDV 1348
MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILA D GIV+AAERK VSKLLAP+KTSEKTY+L + SCVVAGLTADAN+L+N ARL+AQRY+Y Y E MPVEQLV++VCN KQAYTQFGGLRPFGV+FLF GWD HHGFQLY SDPSGNYGGWKATAIGANNQA GK+LLK++Y E S+ED L+LAVKVL KTMDST PS DKME TTI RVN KVV+K+L D E +VLK VE + ST+GDV
Sbjct: 1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILAGDNGIVLAAERKTVSKLLAPSKTSEKTYKLDDATSCVVAGLTADANILINQARLAAQRYLYQYQEAMPVEQLVQRVCNMKQAYTQFGGLRPFGVAFLFAGWDAHHGFQLYQSDPSGNYGGWKATAIGANNQA--GKSLLKNDYAENMSMEDALQLAVKVLTKTMDSTAPSADKMELTTIQRVNDKVVYKVLDDAEVTRVLKLVESQKSTEGDV 250
BLAST of mRNA_D-dichotoma_M_contig110.873.1 vs. uniprot
Match: A0A7S2XZ80_9STRA (Proteasome subunit alpha type n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ80_9STRA) HSP 1 Score: 371 bits (952), Expect = 4.400e-120 Identity = 183/251 (72.91%), Postives = 220/251 (87.65%), Query Frame = 2
Query: 596 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILAKDGIVMAAERKVVSKLLAPAKTSEKTYRLYENASCVVAGLTADANLLVNNARLSAQRYMYMYGENMPVEQLVKQVCNYKQAYTQFGGLRPFGVSFLFTGWDEHHGFQLYHSDPSGNYGGWKATAIGANNQARAGKALLKSEYEEGSSVEDCLKLAVKVLNKTMDSTTPSPDKMEFTTITRVNGKVVHKILTDEETDKVLKEVEPETSTQGDV 1348
MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILA DGIVMAAER+ VSKLLAPAKTSEKTYR+ ++ + VVAGLTADAN+L+ AR+++QRY+Y Y E MPVEQL+++VCNYKQAYTQFGGLRPFGVSFLF GWD+H+GFQLY SDPSGNYGGWKATAIGANNQA GK+LLK+EY + +V++ L+LA KVLNK+MD+TTPS +KMEF T+T +G+V H IL + ET K+L++V+ +T+GD+
Sbjct: 1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILATDGIVMAAERRTVSKLLAPAKTSEKTYRIDDHVAAVVAGLTADANILIQEARVASQRYLYQYQEPMPVEQLIERVCNYKQAYTQFGGLRPFGVSFLFAGWDKHYGFQLYQSDPSGNYGGWKATAIGANNQA--GKSLLKTEYSDTLTVDEALELAAKVLNKSMDTTTPSAEKMEFFTLTLKDGQVQHSILPEAETTKILEKVQAAATTEGDI 249
BLAST of mRNA_D-dichotoma_M_contig110.873.1 vs. uniprot
Match: A0A8K1FDB1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FDB1_PYTOL) HSP 1 Score: 351 bits (901), Expect = 1.800e-112 Identity = 179/252 (71.03%), Postives = 210/252 (83.33%), Query Frame = 2
Query: 596 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILAKDGIVMAAERKVVSKLLAPAKTSEKTYRLYENASCVVAGLTADANLLVNNARLSAQRYMYMYGENMPVEQLVKQVCNYKQAYTQFGGLRPFGVSFLFTGWDEHHGFQLYHSDPSGNYGGWKATAIGANNQARAGKALLKSEYEEGSSVEDCLKLAVKVLNKTMDSTTPSPDKMEFTTITR-VNGKVVHKILTDEETDKVLKEVEPETSTQGDV 1348
M+RRYD TTTFSPEGRL QVEYA+ AI+NAG+ VGILAKDG+V+AAE+K VSKLLAP+KTSEKT +L ++ C VAGLTADAN+L+N ARL+AQRY Y E P EQLV+ +CNYKQAYTQFGG RPFGVSFLF GWD HHGFQLYHSDPSGNYGGWKATAIGANN RA K+LLK+EY+E +V D LK AVKV++KTMDST+ S +K+EFTT+TR NGKVVH+ LT ETD +LKEVE E ++ GD+
Sbjct: 1 MSRRYDGRTTTFSPEGRLFQVEYAMAAIDNAGSAVGILAKDGVVIAAEKKTVSKLLAPSKTSEKTIKLDDHLLCAVAGLTADANILINYARLTAQRYELAYQEKQPCEQLVQALCNYKQAYTQFGGQRPFGVSFLFAGWDRHHGFQLYHSDPSGNYGGWKATAIGANN--RAAKSLLKNEYDENLNVSDALKFAVKVMSKTMDSTSLSAEKLEFTTVTRDENGKVVHRQLTQAETDALLKEVEAEKASAGDI 250
BLAST of mRNA_D-dichotoma_M_contig110.873.1 vs. uniprot
Match: K3XBK9_GLOUD (Proteasome subunit alpha type n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XBK9_GLOUD) HSP 1 Score: 347 bits (891), Expect = 5.730e-111 Identity = 174/253 (68.77%), Postives = 206/253 (81.42%), Query Frame = 2
Query: 596 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILAKDGIVMAAERKVVSKLLAPAKTSEKTYRLYENASCVVAGLTADANLLVNNARLSAQRYMYMYGENMPVEQLVKQVCNYKQAYTQFGGLRPFGVSFLFTGWDEHHGFQLYHSDPSGNYGGWKATAIGANNQARAGKALLKSEYEEGSSVEDCLKLAVKVLNKTMDSTTPSPDKMEFTTITR--VNGKVVHKILTDEETDKVLKEVEPETSTQGDV 1348
M+RRYD TTTFSPEGRL QVEYA+EAINNAG+ VGILAKDGIV+AAE+K +SKLL P+KTSEKT +L ++ C VAGLTADAN+LVN ARL+AQRY Y E P EQLV+ +CNYKQAYTQFGG RPFGVSFL+ GWD HHGFQLYHSDPSGNYGGWKATAIGANN A K+LLK+EYE+ +VED LK AVKV+ KTMD+T PS +K+EFTT+TR GK++H+ LT +ETD +L E T++ GD+
Sbjct: 1 MSRRYDGRTTTFSPEGRLFQVEYAMEAINNAGSAVGILAKDGIVIAAEKKTISKLLTPSKTSEKTIKLDDHLICAVAGLTADANILVNYARLAAQRYELAYQEKNPCEQLVQTICNYKQAYTQFGGQRPFGVSFLYAGWDRHHGFQLYHSDPSGNYGGWKATAIGANNGAA--KSLLKNEYEDTMTVEDALKFAVKVMGKTMDTTAPSSEKLEFTTVTRDAATGKIIHRQLTQQETDALLASAEASTASSGDI 251
BLAST of mRNA_D-dichotoma_M_contig110.873.1 vs. uniprot
Match: A0A024URF4_9STRA (Proteasome subunit alpha type n=10 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024URF4_9STRA) HSP 1 Score: 347 bits (889), Expect = 1.100e-110 Identity = 175/252 (69.44%), Postives = 209/252 (82.94%), Query Frame = 2
Query: 596 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILAKDGIVMAAERKVVSKLLAPAKTSEKTYRLYENASCVVAGLTADANLLVNNARLSAQRYMYMYGENMPVEQLVKQVCNYKQAYTQFGGLRPFGVSFLFTGWDEHHGFQLYHSDPSGNYGGWKATAIGANNQARAGKALLKSEYEEGSSVEDCLKLAVKVLNKTMDSTTPSPDKMEFTTITR-VNGKVVHKILTDEETDKVLKEVEPETSTQGDV 1348
M+RRYD TTTFSPEGRL QVEYA+EAINNAG+ VGILAKDGIV+AAE+K VSKLLAP K SEKT +L ++ C VAGLT+DAN+LVN ARLSAQRY Y E+ P EQLV+ +CNYKQAYTQFGG RPFGVSFL+ GWD H GFQLYHSDPSGNYGGWKATAIGANN RA K LLKS+Y+EG +VE+ LK +VKV+ KTMD+TTP+ +K+EF+T+TR GK+VH++LT ETD +LK+V +T+ GD+
Sbjct: 1 MSRRYDGRTTTFSPEGRLFQVEYAMEAINNAGSAVGILAKDGIVIAAEKKTVSKLLAPVKNSEKTMKLDDHIICAVAGLTSDANILVNYARLSAQRYQLSYQEHQPCEQLVQTICNYKQAYTQFGGQRPFGVSFLYAGWDRHFGFQLYHSDPSGNYGGWKATAIGANN--RAAKNLLKSDYQEGMTVEEALKFSVKVMAKTMDTTTPTAEKLEFSTLTRNEQGKLVHRLLTAAETDALLKDVGAQTADSGDI 250
BLAST of mRNA_D-dichotoma_M_contig110.873.1 vs. uniprot
Match: A0A0W8DG73_PHYNI (Sodium/potassium-transporting ATPase subunit alpha-2 n=9 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DG73_PHYNI) HSP 1 Score: 355 bits (910), Expect = 7.250e-108 Identity = 177/254 (69.69%), Postives = 215/254 (84.65%), Query Frame = 2
Query: 590 TAMARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILAKDGIVMAAERKVVSKLLAPAKTSEKTYRLYENASCVVAGLTADANLLVNNARLSAQRYMYMYGENMPVEQLVKQVCNYKQAYTQFGGLRPFGVSFLFTGWDEHHGFQLYHSDPSGNYGGWKATAIGANNQARAGKALLKSEYEEGSSVEDCLKLAVKVLNKTMDSTTPSPDKMEFTTITR-VNGKVVHKILTDEETDKVLKEVEPETSTQGDV 1348
+ M+RRYD TTTFSPEGRL QVEYA+EAINNAG+ VGILAKDGIV+AAE+K VSKLL P+KTSEKT +L ++ C VAGLTADAN+LVN ARLSAQRY Y E P EQLV+ +CNYKQAYTQFGG RPFGVSFL+ GWD HHGFQLYHSDPSGNYGGWKATAIGANN RA K++LKS+YEEG +VED L +VKV+NKTMDST+PS +K+EFTT+TR +GK+VH+ LT++ET+++L++ +T++ GD+
Sbjct: 440 STMSRRYDGRTTTFSPEGRLFQVEYAMEAINNAGSAVGILAKDGIVIAAEKKTVSKLLTPSKTSEKTIKLDDHLICAVAGLTADANILVNYARLSAQRYELAYQEKEPCEQLVQTICNYKQAYTQFGGQRPFGVSFLYAGWDRHHGFQLYHSDPSGNYGGWKATAIGANN--RAAKSMLKSDYEEGMTVEDALAFSVKVMNKTMDSTSPSAEKLEFTTVTRNPDGKIVHRQLTEKETEELLQKAAADTASSGDM 691
BLAST of mRNA_D-dichotoma_M_contig110.873.1 vs. uniprot
Match: A0A7S2FKK0_9STRA (Proteasome subunit alpha type n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FKK0_9STRA) HSP 1 Score: 339 bits (870), Expect = 1.620e-107 Identity = 174/263 (66.16%), Postives = 209/263 (79.47%), Query Frame = 2
Query: 563 PRLLWSTCATA-MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILAKDGIVMAAERKVVSKLLAPAKTSEKTYRLYENASCVVAGLTADANLLVNNARLSAQRYMYMYGENMPVEQLVKQVCNYKQAYTQFGGLRPFGVSFLFTGWDEHHGFQLYHSDPSGNYGGWKATAIGANNQARAGKALLKSEYEEGSSVEDCLKLAVKVLNKTMDSTTPSPDKMEFTTITRVNGKVVHKILTDEETDKVLKEVEPETSTQGDV 1348
PR L + T M+RRYDSSTTTFSPEGRLHQVEYAIEAINNAGT VGILA DGIV+A E++ + LL P+K+SEK Y+L ++ VVAGLTADAN+L+NNARL +QRY+Y Y E MPVEQLV++VCNYKQAYTQ+GGLRPFGV+FLF GWDEHH +QLY SDPSGNY GWKAT IG NNQA GK LLK+EYEE ++V D LKLA KVL KTMD+T+ + +K+EF +T+ GK+V +IL + ET VL V + S +GDV
Sbjct: 13 PRALARSRTTVVMSRRYDSSTTTFSPEGRLHQVEYAIEAINNAGTAVGILAADGIVLAGEKQKSTSLLQPSKSSEKMYKLDDHVVTVVAGLTADANILINNARLQSQRYLYTYQEPMPVEQLVQRVCNYKQAYTQYGGLRPFGVAFLFAGWDEHHNYQLYMSDPSGNYSGWKATCIGQNNQA--GKGLLKNEYEETATVSDALKLAAKVLQKTMDATSATAEKVEFMVLTKEGGKLVQRILPESETTAVLAAVAADASNEGDV 273
BLAST of mRNA_D-dichotoma_M_contig110.873.1 vs. uniprot
Match: A0A7S2VZK5_9STRA (Proteasome subunit alpha type n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VZK5_9STRA) HSP 1 Score: 336 bits (861), Expect = 2.750e-106 Identity = 179/267 (67.04%), Postives = 209/267 (78.28%), Query Frame = 2
Query: 596 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILAKDGIVMAAERKVVSKLLAPAKTSEKTYRLYENASCVVAGLTADANLLVNNARLSAQRYMYMYGENMPVEQLVKQVCNYKQAYTQFGGLRPFGVSFLFTGWDEHHGFQLYHSDPSGNYGGWKATAIGANNQARAGKALLKSEY------EEGSSVED----------CLKLAVKVLNKTMDSTTPSPDKME-FTTITRVNGKVVHKILTDEETDKVLKEVEPETSTQGD 1345
MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILAKDGIVMA+ER++ S LLAPAK+SEKTY+L ++A+C VAGLTADAN+L++ AR A +Y + Y E++P+E LV+ VCNYKQAYTQ+GGLRP+GV+FLF G+D HHGFQLY SDPSGNY GWKAT IGA NQ GK+LLK+EY EE + ED L+LAVKVLNKTMD+T S DKME FT +G+ VHKIL EET KV+ EV+ ETST GD
Sbjct: 1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILAKDGIVMASERRITSGLLAPAKSSEKTYKLCQHAACTVAGLTADANILIDQARRRAGQYQHQYDEHIPIELLVEHVCNYKQAYTQYGGLRPYGVAFLFAGYDSHHGFQLYQSDPSGNYSGWKATVIGATNQT--GKSLLKNEYGASKDGEEMKTGEDDEVSMPDVSEALRLAVKVLNKTMDATASSSDKMELFTMSLDESGQCVHKILNAEETQKVIDEVDKETSTAGD 265 The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig110.873.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dichotoma_M_contig110.873.1 >prot_D-dichotoma_M_contig110.873.1 ID=prot_D-dichotoma_M_contig110.873.1|Name=mRNA_D-dichotoma_M_contig110.873.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=252bp MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILAKDGIVMAAERKback to top mRNA from alignment at D-dichotoma_M_contig110:38296..45140+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dichotoma_M_contig110.873.1 ID=mRNA_D-dichotoma_M_contig110.873.1|Name=mRNA_D-dichotoma_M_contig110.873.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=6845bp|location=Sequence derived from alignment at D-dichotoma_M_contig110:38296..45140+ (Dictyota dichotoma ODC1387m male)back to top Coding sequence (CDS) from alignment at D-dichotoma_M_contig110:38296..45140+ >mRNA_D-dichotoma_M_contig110.873.1 ID=mRNA_D-dichotoma_M_contig110.873.1|Name=mRNA_D-dichotoma_M_contig110.873.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=1512bp|location=Sequence derived from alignment at D-dichotoma_M_contig110:38296..45140+ (Dictyota dichotoma ODC1387m male)back to top |