mRNA_D-dichotoma_M_contig1099.848.1 (mRNA) Dictyota dichotoma ODC1387m male
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Overview
Homology
BLAST of mRNA_D-dichotoma_M_contig1099.848.1 vs. uniprot
Match: A0A6H5KUF8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUF8_9PHAE) HSP 1 Score: 60.1 bits (144), Expect = 8.320e-8 Identity = 34/87 (39.08%), Postives = 41/87 (47.13%), Query Frame = 2
Query: 140 SIDIHVAAKNGDVAAIAEYIRNGGNLDVQDHQGNRPLHLASRHGQEESVAALLGAGVDPSAVNSTGQTSLVFAEENGHHGCASLIQG 400
SIDIH AA+ G+V AI YIR GGN+ VQD QGN PLH+ +NGH GCA L++G
Sbjct: 4 SIDIHDAAQQGNVTAIEAYIRLGGNMYVQDKQGNPPLHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNGHDGCAMLLRG 90
BLAST of mRNA_D-dichotoma_M_contig1099.848.1 vs. uniprot
Match: A0A1Y6CIS9_9PROT (Uncharacterized protein n=1 Tax=Pseudobacteriovorax antillogorgiicola TaxID=1513793 RepID=A0A1Y6CIS9_9PROT) HSP 1 Score: 58.2 bits (139), Expect = 1.210e-7 Identity = 31/86 (36.05%), Postives = 49/86 (56.98%), Query Frame = 2
Query: 149 IHVAAKNGDVAAIAEYIRNGGNLDVQDHQGNRPLHLASRHGQEESVAALLGAGVDPSAVNSTGQTSLVFAEENGHHGCASLIQGKP 406
++ AAK + +AEY++ GG L+VQD +G PL A+ +G E+ + LLG G DP ++ G T+L+ A G+ A + P
Sbjct: 37 VNRAAKTNNQNLLAEYVKQGGPLNVQDQKGYTPLIFAAYYGHEQLITFLLGHGADPCLKDTRGNTALMGAIFKGNLKIAYQLMKTP 122
BLAST of mRNA_D-dichotoma_M_contig1099.848.1 vs. uniprot
Match: A0A8C4S9P1_ERPCA (Cyclin dependent kinase inhibitor 2C n=2 Tax=Polypteridae TaxID=8289 RepID=A0A8C4S9P1_ERPCA) HSP 1 Score: 57.4 bits (137), Expect = 1.540e-7 Identity = 28/75 (37.33%), Postives = 42/75 (56.00%), Query Frame = 2
Query: 152 HVAAKNGDVAAIAEYIRNGGNLDVQDHQGNRPLHLASRHGQEESVAALLGAGVDPSAVNSTGQTSLVFAEENGHH 376
H AA+ G + + NG ++++QDH+GN PLHLA+R G + V L+ +DP N G T+ AE + H
Sbjct: 77 HDAAREGFLETLMVLTENGADVNLQDHRGNLPLHLAAREGHLDIVRHLIDLTIDPLVRNKEGHTASDLAEMHDRH 151
BLAST of mRNA_D-dichotoma_M_contig1099.848.1 vs. uniprot
Match: A0A7J7QHG7_9CHLO (GPCR-chaperone-domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QHG7_9CHLO) HSP 1 Score: 57.8 bits (138), Expect = 5.470e-7 Identity = 37/96 (38.54%), Postives = 51/96 (53.12%), Query Frame = 2
Query: 140 SIDIHVAAKNGDVAAIAEYIRNGGN--LDVQDHQGNRPLHLASRHGQEESVAALLGAGVDPSAVNSTGQTSLVFAEENGHHGCASLIQGKPLRTLR 421
S ++H AA DVA +A ++N + D GN PLH+A+ G E+VAALL AG+ PSA +S G L A CA L+Q L ++
Sbjct: 22 SYNLHRAAFENDVAKLAALLQNTSQEQRSLLDLHGNNPLHIAAMRGHAEAVAALLDAGLSPSARSSRGWVPLDEACAARSTACARLLQRALLAEVK 117
BLAST of mRNA_D-dichotoma_M_contig1099.848.1 vs. uniprot
Match: A0A6M8W2H7_9PROT (Uncharacterized protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A6M8W2H7_9PROT) HSP 1 Score: 55.8 bits (133), Expect = 2.590e-6 Identity = 29/90 (32.22%), Postives = 49/90 (54.44%), Query Frame = 2
Query: 149 IHVAAKNGDVAAIAEYIRNGGNLDVQDHQGNRPLHLASRHGQEESVAALLGAGVDPSAVNSTGQTSLVFAEENGHHGCASLI----QGKP 406
+H AA+ V+ +++ ++ +D GN PLH+A +HG E + LL G DP +S G T++ AE+ H+ +L+ +GKP
Sbjct: 692 LHQAAEKARVSLTKKFVAAKLPVNRKDVNGNTPLHIAIKHGNEPVIEYLLENGADPKIADSVGFTAVDLAEQRNHYQITNLVKAYAEGKP 781
BLAST of mRNA_D-dichotoma_M_contig1099.848.1 vs. uniprot
Match: A0A7S2SRK5_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRK5_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 6.290e-6 Identity = 36/90 (40.00%), Postives = 46/90 (51.11%), Query Frame = 2
Query: 149 IHVAAKNGDVAAIAEYIRNGGNLDVQDHQGNRPLHLASRHGQEESVAALLGAGVDPSAVNSTGQTSLVFAEENGHHGCASLIQGKPLRTL 418
+HVA K+G A+A R ++D + GNRPLHLA RHG LL AG P+AVN+ +T L H A Q P+R L
Sbjct: 359 LHVAVKHGHRRAVAMMSRVA-DVDCESDDGNRPLHLACRHGFAGIAEDLLEAGAAPNAVNANSETPL--------HMAARHNQPLPVRVL 439
BLAST of mRNA_D-dichotoma_M_contig1099.848.1 vs. uniprot
Match: A0A8C4S8N6_ERPCA (Cyclin dependent kinase inhibitor 2C n=1 Tax=Erpetoichthys calabaricus TaxID=27687 RepID=A0A8C4S8N6_ERPCA) HSP 1 Score: 52.4 bits (124), Expect = 1.170e-5 Identity = 25/68 (36.76%), Postives = 39/68 (57.35%), Query Frame = 2
Query: 152 HVAAKNGDVAAIAEYIRNGGNLDVQDHQGNRPLHLASRHGQEESVAALLGAGVDPSAVNSTGQTSLVF 355
H AA+ G + + NG ++++QDH+GN PLHLA+R G + V L+ +DP N G ++ F
Sbjct: 77 HDAAREGFLETLMVLTENGADVNLQDHRGNLPLHLAAREGHLDIVRHLIDLTIDPLVRNKEGGKAVPF 144
BLAST of mRNA_D-dichotoma_M_contig1099.848.1 vs. uniprot
Match: A0A7T7C0M7_9GAMM (Ankyrin repeat domain-containing protein n=13 Tax=Halomonadaceae TaxID=28256 RepID=A0A7T7C0M7_9GAMM) HSP 1 Score: 52.8 bits (125), Expect = 1.290e-5 Identity = 27/70 (38.57%), Postives = 43/70 (61.43%), Query Frame = 2
Query: 143 IDIHVAAKNGDVAAIAEYIRNGGNLDVQDHQGNRPLHLASRHGQEESVAALLGAGVDPSAVNSTGQTSLV 352
IDI AA++GD AAI EY++ GG+L V + + P LA+ +G +++A L AG D A++ G + +
Sbjct: 43 IDIFDAARDGDNAAIQEYVQQGGDLSVTNSRSYTPFILAAYYGHTDTLALLKTAGADACALDEKGSNAFM 112
BLAST of mRNA_D-dichotoma_M_contig1099.848.1 vs. uniprot
Match: A0A8E0RU64_9TREM (Transient receptor potential cation channel subfamily A member 1 n=1 Tax=Fasciolopsis buski TaxID=27845 RepID=A0A8E0RU64_9TREM) HSP 1 Score: 53.5 bits (127), Expect = 1.710e-5 Identity = 31/83 (37.35%), Postives = 44/83 (53.01%), Query Frame = 2
Query: 149 IHVAAKNGDVAAIAEYIRNGG-NLDVQDHQGNRPLHLASRHGQEESVAALLGAGVDPSAVNSTGQTSLVFAEENGHHGCASLI 394
+H AA G+ A + ++ G ++++ DH G RPLHLA H + V +LL AG DP AV G + FA G+ LI
Sbjct: 187 LHYAAIRGNEVATYQLLKEPGIDIELSDHDGMRPLHLAVAHNETGIVHSLLTAGADPFAVTQRGNLPIHFACITGNVELVELI 269
BLAST of mRNA_D-dichotoma_M_contig1099.848.1 vs. uniprot
Match: A0A0D9V7D2_9ORYZ (MSP domain-containing protein n=1 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9V7D2_9ORYZ) HSP 1 Score: 53.1 bits (126), Expect = 2.030e-5 Identity = 33/87 (37.93%), Postives = 46/87 (52.87%), Query Frame = 2
Query: 149 IHVAAKNGDVAAIAEYIRNGGNLDVQ--DHQGNRPLHLASRHGQEESVAALLGAGVDPSAVNSTGQTSLVFAEENGHHGCASLIQGK 403
+H+AA G AIA + G +D++ D +G+RPLHLA G E+V LL G D A G T L A G+ A L++G+
Sbjct: 319 LHLAAIKGHCDAIA-LLAGSGCMDIECEDVEGHRPLHLAVEGGSAEAVEMLLDMGADVHAATRRGATPLQMAVTMGYDAIAQLLRGR 404 The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1099.848.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dichotoma_M_contig1099.848.1 >prot_D-dichotoma_M_contig1099.848.1 ID=prot_D-dichotoma_M_contig1099.848.1|Name=mRNA_D-dichotoma_M_contig1099.848.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=96bp MSIDIHVAAKNGDVAAIAEYIRNGGNLDVQDHQGNRPLHLASRHGQEESVback to top mRNA from alignment at D-dichotoma_M_contig1099:227925..228840+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dichotoma_M_contig1099.848.1 ID=mRNA_D-dichotoma_M_contig1099.848.1|Name=mRNA_D-dichotoma_M_contig1099.848.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=916bp|location=Sequence derived from alignment at D-dichotoma_M_contig1099:227925..228840+ (Dictyota dichotoma ODC1387m male)back to top Coding sequence (CDS) from alignment at D-dichotoma_M_contig1099:227925..228840+ >mRNA_D-dichotoma_M_contig1099.848.1 ID=mRNA_D-dichotoma_M_contig1099.848.1|Name=mRNA_D-dichotoma_M_contig1099.848.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=576bp|location=Sequence derived from alignment at D-dichotoma_M_contig1099:227925..228840+ (Dictyota dichotoma ODC1387m male)back to top |