mRNA_D-dichotoma_M_contig1088.758.1 (mRNA) Dictyota dichotoma ODC1387m male
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Overview
Homology
BLAST of mRNA_D-dichotoma_M_contig1088.758.1 vs. uniprot
Match: D8LBS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBS2_ECTSI) HSP 1 Score: 109 bits (273), Expect = 8.760e-22 Identity = 80/186 (43.01%), Postives = 101/186 (54.30%), Query Frame = 1
Query: 892 ELMTGRASGAATKFAKQLDEARKARRKGAGDVLLEALAERNLTDTRECERDVHGALRHLRRCRDLARRAGSIALETDTYRRLSSIYAEIAAEAAQHDPLGRGREAVRGARAAVADRDGFIASSVVGDGWDEDSMEETDVEA-------REDVDIKFLRERAAERARLFAERYANAARGLAWPMGRG 1428
+LMTGR AA +F QL EA+ AGD +LEALAERNL DTRE + D+ GAL HLRRCR LA+R+ + ALE D RRLSS+YAEIA ++ + D E + ++ RED D++FL+ AA+RARLFAERY A GL WP+ G
Sbjct: 216 DLMTGRPVQAAERFELQLKEAQ-----NAGDPILEALAERNLADTREVDEDLPGALAHLRRCRALAQRSRNSALEADACRRLSSVYAEIAGQSGXXXXXXXXXXXXXXSPEREKGGDHGDGXXXXXXXTQERNRSDSGXXXXXXXXXXREDSDVEFLKSTAADRARLFAERYETAVFGLEWPVSSG 396 The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1088.758.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dichotoma_M_contig1088.758.1 >prot_D-dichotoma_M_contig1088.758.1 ID=prot_D-dichotoma_M_contig1088.758.1|Name=mRNA_D-dichotoma_M_contig1088.758.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=516bp MTAVEVANSRGLCTLSAGARAYIDPPPPFGVGDAARKTRRSLQLAVGTPAback to top mRNA from alignment at D-dichotoma_M_contig1088:224005..228300+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dichotoma_M_contig1088.758.1 ID=mRNA_D-dichotoma_M_contig1088.758.1|Name=mRNA_D-dichotoma_M_contig1088.758.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=4296bp|location=Sequence derived from alignment at D-dichotoma_M_contig1088:224005..228300+ (Dictyota dichotoma ODC1387m male)back to top Coding sequence (CDS) from alignment at D-dichotoma_M_contig1088:224005..228300+ >mRNA_D-dichotoma_M_contig1088.758.1 ID=mRNA_D-dichotoma_M_contig1088.758.1|Name=mRNA_D-dichotoma_M_contig1088.758.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=3096bp|location=Sequence derived from alignment at D-dichotoma_M_contig1088:224005..228300+ (Dictyota dichotoma ODC1387m male)back to top |