mRNA_D-dichotoma_M_contig1088.756.1 (mRNA) Dictyota dichotoma ODC1387m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dichotoma_M_contig1088.756.1
Unique NamemRNA_D-dichotoma_M_contig1088.756.1
TypemRNA
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Homology
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BLAST of mRNA_D-dichotoma_M_contig1088.756.1 vs. uniprot
Match: D8LBS0_ECTSI (eIF-5a domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBS0_ECTSI)

HSP 1 Score: 311 bits (796), Expect = 1.870e-95
Identity = 151/163 (92.64%), Postives = 158/163 (96.93%), Query Frame = 2 
Query: 1862 ATMATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTAVPVVRRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPSFPEGFGQEIKKQFDDGKTLTVTVMAAMGHEQIVTYKEEA 2350
            +TMATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTT+VPVV RNEYQLLDISDDGFCSLLTEEGDTKDDLQLP++PEGFG EIK +FD+G TL VTVMAAMGHEQIVTYKEE+
Sbjct:   37 STMATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPEGFGNEIKAKFDEGATLCVTVMAAMGHEQIVTYKEES 199
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BLAST of mRNA_D-dichotoma_M_contig1088.756.1 vs. uniprot
Match: A0A6H5KDL5_9PHAE (eIF-5a domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDL5_9PHAE)

HSP 1 Score: 310 bits (793), Expect = 3.260e-94
Identity = 151/169 (89.35%), Postives = 159/169 (94.08%), Query Frame = 2 
Query: 1844 PNCPIAATMATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTAVPVVRRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPSFPEGFGQEIKKQFDDGKTLTVTVMAAMGHEQIVTYKEEA 2350
            P     +TMATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTT+VPVV RNEYQLLDISDDGFCSLLTEEGDTKDDLQLP++PEGFG EIK +F++G TL VTVMAAMGHEQIVTYKEE+
Sbjct:   85 PTTQSLSTMATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPEGFGNEIKAKFEEGLTLCVTVMAAMGHEQIVTYKEES 253
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BLAST of mRNA_D-dichotoma_M_contig1088.756.1 vs. uniprot
Match: A0A835Z7R2_9STRA (Eukaryotic translation initiation factor 5A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7R2_9STRA)

HSP 1 Score: 255 bits (652), Expect = 1.930e-75
Identity = 119/164 (72.56%), Postives = 143/164 (87.20%), Query Frame = 2 
Query: 1856 IAATMATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTAVPVVRRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPSFPEGFGQEIKKQFDDGKTLTVTVMAAMGHEQIVTYKEE 2347
            +A T AT++ LN+YDFT +DAGASHT P +AGQIRKGGYIVIKG PCKV NVSTSKTGKHGHAKANFTA DIFTGKKLED++P++H T+VP V R +YQLLDISDDGF SLLTE GDTKDDL+LP FPEGF ++++ +FD GKTL VTV++AMGH+Q++ YKE+
Sbjct:    1 MAETSATDEALNNYDFTSSDAGASHTFPMDAGQIRKGGYIVIKGRPCKVANVSTSKTGKHGHAKANFTAIDIFTGKKLEDIVPTSHATSVPNVARVDYQLLDISDDGFLSLLTESGDTKDDLKLPGFPEGFDEQLRTEFDAGKTLIVTVVSAMGHDQVMAYKED 164
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BLAST of mRNA_D-dichotoma_M_contig1088.756.1 vs. uniprot
Match: W7U6Y6_9STRA (Eukaryotic translation initiation factor 5A n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6Y6_9STRA)

HSP 1 Score: 229 bits (583), Expect = 6.470e-66
Identity = 111/155 (71.61%), Postives = 132/155 (85.16%), Query Frame = 2 
Query: 1886 LNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTAVPVVRRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPSFPEGFGQEIKKQFDDGKTLTVTVMAAMGHEQIVTYKEEA 2350
            + DYDF+GT AGAS   PSEAGQI+KGGYI+IKG PCKVVNVSTSKTGKHGHAKANFTA DIF GKK+EDV+P+THTT VP V R+EYQLLDI +DGF SLL E+G T+DDL+LP +PEGF QEI K + DGK+L+V+V++A G +QI+ YKEEA
Sbjct:    9 IEDYDFSGTTAGASDVFPSEAGQIKKGGYIMIKGRPCKVVNVSTSKTGKHGHAKANFTAIDIFNGKKVEDVVPTTHTTYVPNVNRSEYQLLDI-EDGFVSLLQEDGGTRDDLKLPDYPEGFDQEILKAYQDGKSLSVSVLSACGIDQIIAYKEEA 162
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BLAST of mRNA_D-dichotoma_M_contig1088.756.1 vs. uniprot
Match: A0A7S2UU65_9STRA (Eukaryotic translation initiation factor 5A n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU65_9STRA)

HSP 1 Score: 226 bits (577), Expect = 4.510e-65
Identity = 108/157 (68.79%), Postives = 133/157 (84.71%), Query Frame = 2 
Query: 1883 KLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTAVPVVRRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPSFPEGFGQEIKKQFDDGKTLTVTVMAAMGHEQIVTYKEEAA 2353
            KL+D+ F   ++GAS TIP EAGQIRKGG+IVIKG PCKVVNVSTSKTGKHGHAKANFTA DIFTGKK ED++P+THTT+VP V R EYQL+DISDDG+ SLLT+ GDTKDDL LP+ PEGF  EI+  FD+GK++ +TV++AMG +Q+V+ KE+ +
Sbjct:    7 KLDDFHFDTGESGASLTIPMEAGQIRKGGHIVIKGKPCKVVNVSTSKTGKHGHAKANFTAIDIFTGKKYEDIVPTTHTTSVPNVSRAEYQLIDISDDGYLSLLTDSGDTKDDLVLPTHPEGFADEIRAAFDEGKSMVLTVLSAMGTDQVVSMKEDTS 163
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BLAST of mRNA_D-dichotoma_M_contig1088.756.1 vs. uniprot
Match: M4B4L4_HYAAE (Eukaryotic translation initiation factor 5A n=18 Tax=Peronosporaceae TaxID=4777 RepID=M4B4L4_HYAAE)

HSP 1 Score: 224 bits (571), Expect = 2.740e-64
Identity = 107/160 (66.88%), Postives = 131/160 (81.88%), Query Frame = 2 
Query: 1868 MATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTAVPVVRRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPSFPEGFGQEIKKQFDDGKTLTVTVMAAMGHEQIVTYKEE 2347
            MA E++  D+ F  TDAGAS T PSEAGQIRKGG+I+IKGHPCKVVN+STSKTGKHGHAK NFTA DIFT KK ED++PSTHTT+VP V R EY LLDI+DD FCSL+ + GDT++D++LP+FPE FG+EI+  F+DGK L +TV+ A G EQI+  KE+
Sbjct:    1 MAEEEQ--DFTFHSTDAGASETYPSEAGQIRKGGFIMIKGHPCKVVNMSTSKTGKHGHAKCNFTALDIFTNKKYEDIVPSTHTTSVPFVSRAEYTLLDITDDDFCSLMDDSGDTREDIKLPTFPETFGEEIRADFNDGKQLVLTVLKACGTEQIIAKKED 158
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BLAST of mRNA_D-dichotoma_M_contig1088.756.1 vs. uniprot
Match: A0A6A3TKK1_9STRA (Eukaryotic translation initiation factor 5A n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TKK1_9STRA)

HSP 1 Score: 222 bits (566), Expect = 2.520e-63
Identity = 104/165 (63.03%), Postives = 130/165 (78.79%), Query Frame = 2 
Query: 1853 PIAATMATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTAVPVVRRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPSFPEGFGQEIKKQFDDGKTLTVTVMAAMGHEQIVTYKEE 2347
            P+  +   E + +D++F  TDAGAS T PSEAGQIRKGG+I+IKGHPCKVVNVSTSKTGKHGHAK NFTA DIFT KK ED++PSTHTT+VP V R EY LLDI+DD F SL+ + G+T++D++LP+FPE F  EI+  FDDGK L +TV+ A G EQ++  KE+
Sbjct:   12 PLPLSTMAEHEEHDFEFHSTDAGASETYPSEAGQIRKGGFIMIKGHPCKVVNVSTSKTGKHGHAKCNFTALDIFTNKKYEDIVPSTHTTSVPFVSRAEYTLLDITDDDFVSLMDDSGETREDIKLPTFPETFADEIRADFDDGKQLVLTVLKACGTEQVIAKKED 176
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BLAST of mRNA_D-dichotoma_M_contig1088.756.1 vs. uniprot
Match: A0A8K1CGM3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGM3_PYTOL)

HSP 1 Score: 221 bits (563), Expect = 3.350e-63
Identity = 104/153 (67.97%), Postives = 125/153 (81.70%), Query Frame = 2 
Query: 1889 NDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTAVPVVRRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPSFPEGFGQEIKKQFDDGKTLTVTVMAAMGHEQIVTYKEE 2347
            +DY F  TDAGAS T P EAGQI+K G+I+IKGHPCKVVNVSTSKTGKHGHAK NFTA DIFT KKLED++PSTHTT+VP V R EY LLDIS+D F SL+ E GDT++D++LPS+P+GF  EI+  F+DGK L VTV+ A G EQI++ KE+
Sbjct:    3 DDYTFESTDAGASETYPMEAGQIKKNGFIMIKGHPCKVVNVSTSKTGKHGHAKCNFTALDIFTNKKLEDIVPSTHTTSVPFVSRKEYTLLDISEDDFVSLMDESGDTREDVKLPSYPDGFANEIRSDFEDGKQLVVTVLKACGTEQIISKKED 155
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BLAST of mRNA_D-dichotoma_M_contig1088.756.1 vs. uniprot
Match: A0A5D6XTX1_9STRA (Eukaryotic translation initiation factor 5A n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTX1_9STRA)

HSP 1 Score: 218 bits (554), Expect = 5.780e-62
Identity = 104/152 (68.42%), Postives = 123/152 (80.92%), Query Frame = 2 
Query: 1892 DYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTAVPVVRRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPSFPEGFGQEIKKQFDDGKTLTVTVMAAMGHEQIVTYKEE 2347
            DY F  TDAGAS T P EAGQIRKGG+I+IKGHPCKVV+VSTSKTGKHGHAK NFTA DIFT KKLED++PSTHTT+VP V R EY LLDISDD F +L+ + GDT+DD++LP+FP+ F  EI+  FD GK L VTV+ A G EQI++ KE+
Sbjct:    5 DYTFESTDAGASDTYPCEAGQIRKGGFIMIKGHPCKVVSVSTSKTGKHGHAKCNFTALDIFTNKKLEDIVPSTHTTSVPFVARAEYTLLDISDDDFVTLMDDGGDTRDDIKLPTFPDNFADEIRADFDSGKQLVVTVLKACGIEQIISKKED 156
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BLAST of mRNA_D-dichotoma_M_contig1088.756.1 vs. uniprot
Match: K3WUI8_GLOUD (Eukaryotic translation initiation factor 5A n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUI8_GLOUD)

HSP 1 Score: 216 bits (550), Expect = 2.050e-61
Identity = 100/153 (65.36%), Postives = 126/153 (82.35%), Query Frame = 2 
Query: 1889 NDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTAVPVVRRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPSFPEGFGQEIKKQFDDGKTLTVTVMAAMGHEQIVTYKEE 2347
            +DY F  TDAGAS T P EAGQIRKGG+I+IKGHPCKVV+VSTSKTGKHGHAK NFTA DIFT KKLED++PSTHTT+VP V R+EY LLDI+DD F SL+ + G+T++D++LP+FP+ F +EI+  FD GK L +TV+ A G EQ+++ KE+
Sbjct:    3 DDYTFESTDAGASDTFPCEAGQIRKGGFIMIKGHPCKVVSVSTSKTGKHGHAKCNFTALDIFTNKKLEDIVPSTHTTSVPFVSRSEYTLLDITDDDFLSLMDDSGETREDIKLPTFPDNFAEEIRADFDAGKQLVLTVLKACGTEQVISKKED 155
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1088.756.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBS0_ECTSI1.870e-9592.64eIF-5a domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KDL5_9PHAE3.260e-9489.35eIF-5a domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835Z7R2_9STRA1.930e-7572.56Eukaryotic translation initiation factor 5A n=2 Ta... [more]
W7U6Y6_9STRA6.470e-6671.61Eukaryotic translation initiation factor 5A n=2 Ta... [more]
A0A7S2UU65_9STRA4.510e-6568.79Eukaryotic translation initiation factor 5A n=1 Ta... [more]
M4B4L4_HYAAE2.740e-6466.88Eukaryotic translation initiation factor 5A n=18 T... [more]
A0A6A3TKK1_9STRA2.520e-6363.03Eukaryotic translation initiation factor 5A n=3 Ta... [more]
A0A8K1CGM3_PYTOL3.350e-6367.97Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XTX1_9STRA5.780e-6268.42Eukaryotic translation initiation factor 5A n=1 Ta... [more]
K3WUI8_GLOUD2.050e-6165.36Eukaryotic translation initiation factor 5A n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig1088contigD-dichotoma_M_contig1088:200355..206905 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score308.1
Seed ortholog evalue2.4e-81
Seed eggNOG ortholog2880.D8LBS0
Preferred nameEIF5A2
KEGG koko:K03263,ko:K10447
KEGG Pathwayko04120,map04120
GOsGO:0000003,GO:0002119,GO:0002164,GO:0002181,GO:0002182,GO:0002184,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0003746,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005642,GO:0005643,GO:0005737,GO:0005739,GO:0005777,GO:0005783,GO:0005789,GO:0005829,GO:0005840,GO:0006403,GO:0006405,GO:0006406,GO:0006412,GO:0006413,GO:0006414,GO:0006415,GO:0006417,GO:0006446,GO:0006448,GO:0006449,GO:0006452,GO:0006518,GO:0006611,GO:0006807,GO:0006810,GO:0006873,GO:0006874,GO:0006875,GO:0006886,GO:0006913,GO:0006915,GO:0007204,GO:0007275,GO:0007276,GO:0007283,GO:0007548,GO:0007568,GO:0008079,GO:0008104,GO:0008135,GO:0008150,GO:0008152,GO:0008219,GO:0008284,GO:0008360,GO:0008406,GO:0009058,GO:0009059,GO:0009653,GO:0009719,GO:0009725,GO:0009791,GO:0009887,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010509,GO:0010556,GO:0010557,GO:0010564,GO:0010604,GO:0010608,GO:0010628,GO:0010660,GO:0010661,GO:0010662,GO:0010663,GO:0010665,GO:0010666,GO:0010941,GO:0010942,GO:0012501,GO:0012505,GO:0015031,GO:0015833,GO:0015931,GO:0016020,GO:0016043,GO:0017069,GO:0017070,GO:0019222,GO:0019538,GO:0019725,GO:0019953,GO:0022411,GO:0022414,GO:0022603,GO:0022604,GO:0022626,GO:0030003,GO:0030425,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031344,GO:0031503,GO:0031967,GO:0031975,GO:0031984,GO:0032268,GO:0032270,GO:0032465,GO:0032467,GO:0032501,GO:0032502,GO:0032504,GO:0032870,GO:0032984,GO:0032991,GO:0033036,GO:0034248,GO:0034250,GO:0034613,GO:0034641,GO:0034645,GO:0035262,GO:0036477,GO:0042127,GO:0042175,GO:0042221,GO:0042579,GO:0042592,GO:0042886,GO:0042981,GO:0042995,GO:0043005,GO:0043021,GO:0043022,GO:0043025,GO:0043043,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043243,GO:0043244,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044087,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044297,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044445,GO:0044446,GO:0044463,GO:0044464,GO:0044703,GO:0044877,GO:0045137,GO:0045138,GO:0045184,GO:0045595,GO:0045597,GO:0045727,GO:0045787,GO:0045901,GO:0045905,GO:0045948,GO:0046661,GO:0046907,GO:0047485,GO:0048232,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048608,GO:0048609,GO:0048731,GO:0048856,GO:0048878,GO:0050657,GO:0050658,GO:0050789,GO:0050793,GO:0050794,GO:0050801,GO:0050896,GO:0051028,GO:0051094,GO:0051128,GO:0051130,GO:0051147,GO:0051149,GO:0051168,GO:0051169,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051236,GO:0051246,GO:0051247,GO:0051302,GO:0051480,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0051726,GO:0051781,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0060255,GO:0060491,GO:0060548,GO:0061458,GO:0065007,GO:0065008,GO:0070727,GO:0070887,GO:0071166,GO:0071310,GO:0071426,GO:0071427,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072503,GO:0072507,GO:0080090,GO:0090068,GO:0090342,GO:0090343,GO:0090598,GO:0097066,GO:0097067,GO:0097159,GO:0097447,GO:0097458,GO:0098589,GO:0098771,GO:0098805,GO:0098827,GO:0120025,GO:0120038,GO:1900247,GO:1900249,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903270,GO:1903272,GO:1990904,GO:2000112,GO:2000377,GO:2000379,GO:2000765,GO:2000767
EggNOG free text desc.eukaryotic translation initiation factor
EggNOG OGsCOG0231@1,KOG3271@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03012,ko04121
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionTranslation protein SH3-like domain
Ec32 orthologEc-27_002930.1
Exons4
Model size3256
Cds size489
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig1088.756.1prot_D-dichotoma_M_contig1088.756.1Dictyota dichotoma ODC1387m malepolypeptideD-dichotoma_M_contig1088 201255..205038 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927587.6890268-UTR-D-dichotoma_M_contig1088:200354..2012541622927587.6890268-UTR-D-dichotoma_M_contig1088:200354..201254Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1088 200355..201254 -
1690798050.2875636-UTR-D-dichotoma_M_contig1088:200354..2012541690798050.2875636-UTR-D-dichotoma_M_contig1088:200354..201254Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1088 200355..201254 -
1622927587.7617629-UTR-D-dichotoma_M_contig1088:205038..2069051622927587.7617629-UTR-D-dichotoma_M_contig1088:205038..206905Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1088 205039..206905 -
1690798050.3332357-UTR-D-dichotoma_M_contig1088:205038..2069051690798050.3332357-UTR-D-dichotoma_M_contig1088:205038..206905Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1088 205039..206905 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927587.7044299-CDS-D-dichotoma_M_contig1088:201254..2013201622927587.7044299-CDS-D-dichotoma_M_contig1088:201254..201320Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1088 201255..201320 -
1690798050.2984123-CDS-D-dichotoma_M_contig1088:201254..2013201690798050.2984123-CDS-D-dichotoma_M_contig1088:201254..201320Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1088 201255..201320 -
1622927587.7180274-CDS-D-dichotoma_M_contig1088:201462..2015571622927587.7180274-CDS-D-dichotoma_M_contig1088:201462..201557Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1088 201463..201557 -
1690798050.309115-CDS-D-dichotoma_M_contig1088:201462..2015571690798050.309115-CDS-D-dichotoma_M_contig1088:201462..201557Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1088 201463..201557 -
1622927587.7302938-CDS-D-dichotoma_M_contig1088:204068..2042641622927587.7302938-CDS-D-dichotoma_M_contig1088:204068..204264Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1088 204069..204264 -
1690798050.3171005-CDS-D-dichotoma_M_contig1088:204068..2042641690798050.3171005-CDS-D-dichotoma_M_contig1088:204068..204264Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1088 204069..204264 -
1622927587.7435577-CDS-D-dichotoma_M_contig1088:204906..2050381622927587.7435577-CDS-D-dichotoma_M_contig1088:204906..205038Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1088 204907..205038 -
1690798050.3250928-CDS-D-dichotoma_M_contig1088:204906..2050381690798050.3250928-CDS-D-dichotoma_M_contig1088:204906..205038Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1088 204907..205038 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dichotoma_M_contig1088.756.1

>prot_D-dichotoma_M_contig1088.756.1 ID=prot_D-dichotoma_M_contig1088.756.1|Name=mRNA_D-dichotoma_M_contig1088.756.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=163bp
MATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVST
SKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTAVPVVRRNEYQLLDIS
DDGFCSLLTEEGDTKDDLQLPSFPEGFGQEIKKQFDDGKTLTVTVMAAMG
HEQIVTYKEEAA*
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mRNA from alignment at D-dichotoma_M_contig1088:200355..206905-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dichotoma_M_contig1088.756.1 ID=mRNA_D-dichotoma_M_contig1088.756.1|Name=mRNA_D-dichotoma_M_contig1088.756.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=6551bp|location=Sequence derived from alignment at D-dichotoma_M_contig1088:200355..206905- (Dictyota dichotoma ODC1387m male)
CTCCCGCAGCGATTCCCAACCCAGTCTGTTCCCCTGTCCTTCCGTTGCTA
GCAAGCATCCACAGGTAAGGAGTTAAAGAAACTGTTGCCTGACTTCATTG
CCAGGGAAGTGAATCTGTGTGGAATATTGTGGGGCGTACTGTAGCTGGTG
ACGGTTTTGTGGTGTACGGCTGTCAGTCCGCATGGAAGTACAAGGCTACG
GCATCCACCAGTGCCATCCCAGAGTTGATGTAAAAATTACCGAATGCAAA
GGAGGGTCGACGCGGAGCTGATTTTGTCCAGAAATTATGTAATTTCATTG
CACGTCAATAGTTGGAGGCAGCTGATTCTTCTCGTCGTGCAGATGAAGCT
TTCTCCCTACCGGATGTGGCTTGTTCCGAAGGTGTTTCCGCGGCAGCTCG
AGCCTGAATTTGAGTTGGGGATGATACGCATGTACACTATGTTTGAGCCG
TTGCTGCCGAAGTATCTGGAAAGGAGACGTGGCCGATCACAACCGTCGGA
GATTGGGTAGGTCGTTAAGACTACTATCAGGGTGATGGCCACTACGGCTT
GACTCGCTGTAGGCGGCAACACACCCAGGCATACGGGACCTGAGGAGGAT
GGGCGTTGCACTCTCAGTTCTCTCTAATTTCAGGTCTTCGTAGAACATCA
ACATGCCACCTTGTAGAAGGACGATTTCGTTCTTATGACAAGTCATCTGC
GCCCAAGATACTTTACCAACGACGCGTCACTCCGTTCTCTTCATAGGGTT
GCCTGCTTGCCTTTAAAATGCCCTGGGATATGTCCCAGTATATTTTCCCC
TTTGCAGAGGCGTTGTGTGGTGCGCTTCTGGGTACTTGCGTGTCCATCGC
GAGAAATGGTTCGCATGCAATTCTAAATCAGGTTCAAGGGAAGCAGAGAG
ATTCGCATGGTAGTCCTCAGCAGGTTCGCTCCAAGCCAAGACGTTGGGAC
GGGAGCGCTGTACCCCCCACTGAACTGCTCAATTTGAACTTAACCTGTGG
GGGAAATATGCGCAGCTTACTGGCTTGAGCTCGGCTGTGTTCAACCCAAA
CCTCCGCCCTGTCATTCGTTCGTCCTCTCCCCTAATTTCACAGCATGGGG
GCACAGGCTAGTCAAGGTTGCCCTTGTGACGTAGGGCATACTCATAAAAA
GAATGCCGTGGTCGACTGGTCGTAGCACCGTCCCCGCGTCGCTCATGGTT
GTGTTATCCCAACCTACGCGCGTCCTTGACAGGGACCGCTTCCATATGAG
CCTATTTATTTTATTTATCTGGGATCGATTGGCAAGAGCGCAAGATGCTC
AAGCTGGTGTAGACCACCCGCCTTCTGTTTTGATAACTGCCCCCTTCGAC
TATGGATCATGTGCTACGTTTGTTCGCAATCCCAATGCGCTGCAACATTT
TAAAGCCGCATACGCTTCAACCTTCAGTGAGATCGATACGTGGAGACTGT
GCGAGCCCGTACGAGCGAAGTTATCTGTTTTCTCGCGGAAACAGACTATT
AAGCGAGGCTGGGGACTCGGAAACGACCCCGTCAGCCCGTGTGGTCCGTG
GTGCCCTAGGGTAACGCTACGTTTCTTAAGGGGAGAGAATCTGAGTTTTT
GTCTGATCGCCGCCTGATACGTTCACCCCTGGGGCATGAACTGGATATAC
CATTTGATGTCGTTTGCCTCTCTCGCCCTTAGGCGATGCCACGAGCGATG
GCCGCAAGGACCACCGGTCTCAGACTGGTCAGCTTTGCTCGGGCTGAAGA
GACTTGTCCCTGCTCTCCCCATTGACTTCTGAATCGATGATGGGTGTAGT
GTTCTTGCTAAAGTAGTATCGCGCGTTGGGGTTTTGTTCGGTGCCAAATT
GTCCGATCGCAGCTACAATGGCCACCGAGGACAAGCTGAACGACTACGAC
TTCACGGGGACGGATGCCGGTGCCTCGCACACCATCCCCTCCGAGGCTGG
CCAAATTCGTAAAGGCGGATACATCGTGATCAAGGGGCACCCCTGCAAGG
TGAGTGAGTGGAGGGAGGAGGACACTTACCCGTTCGTTCGTTACTGCTCC
TCATTCCCTGTGCATTGCGTTGTGTCCTGGCTGTGTTTGATGCTCTCCTC
CCTACTGAGCGATGATTGCAGGGTTCAAGATAATAATAAAAAAAGAGATT
TTGATCGAGAGGCACTCGGCGTTGAGAATTTGCGTGCGAAGCTTGTTGGC
CTCCTGTGTTTCGACCCATGAGAAATGCAGTGCAATGCTGCGAGGTTCGC
CGTCCGGTCTCCGTGGCTTAACGTTCGTTCTGGTGACGTGTCGCCGGGGA
GGTTGGGGTGCATGCGGCACCTTCCTCTCATTTGCGGGCTGCATGGTGTC
AACGAAACCTGTTGAGGTGCTTCCCCGCAATGGTTAACTCGACGAGGATT
TGAGCCTAGAGCATGCCCCAGCTCTGCCGCAGTCTGTCGCAGAACGAAAC
ATCTGTCTTGTGCCTGACGTCATCCGCCCTTCTGTTTCCCCCTGGCTGCA
TGTTGACAACCACATTGCGCTCATTCCTTCGATGCCGATGTATTTGTTGC
CCATATTGAGTTTTTCGGTATCATTGAACTGTGCGTCGTGGCATAACATA
ATGAGAGACACCGTTTCCTTGCCCGTGGATACATGGATCAGGTGGTGAAC
GTTTCCACCTCGAAGACCGGCAAGCACGGACACGCCAAGGCTAACTTCAC
GGCGACCGACATCTTCACCGGGAAGAAGCTGGAAGATGTGATCCCCTCCA
CCCACACCACCGCCGTTCCCGTGGTTCGCCGCAACGAGTACCAGCTCCTC
GACATCTCCGATGACGGATTCTGCTCTCTGCTCACCGGTGGGTAACGGTC
CGAGCGGGGCAAAATGTGGAGTCATCCCGCACAGCAAGTTATCCGCGCTT
GTTGTCTGTAGAGTAATACTGCCTAGTAAGTGTATGGAGGTGAACAGAAA
GGAATGGAGGCGTGCGTGGTCCGCGTTCGTTCGTTTGGGACCTCGATGAC
GCGGCCAGCGTGCATGCAGTGTTGGTGCGCGCGAAGCTTATTAATAGGCT
GTGCTCTTCACGCACTTGAAACAGATGCTACTGTCGAGCTGCTGTTCCGA
AATATGAGCCTTGCTTGATGGTTGTGGTTGAATGACGTGGTTCCGGGGAG
CATCTGCCGAGGCGTTTGAGGTATAAACGTAATGCGTGCAGGGGGAAGGA
TGCCTTGAGATGCCGGGTTGCTATTATAAGTCGCCAGCGTTCATGGGGTG
CGTATTACGTAGACAGGTAGCGTACAGGGAGGAAAGGGTAGCTGGTGTTG
GGCTTGAGTTCGAGAGGACGGTGCCCTCCAACTCTGCACAAGTCCCAATT
CGAGAGGTGTTCGATGGACTATAGGAGTTCTCGGTGTTGACTCGGGTGAT
GCGTTTTGTCCCTCTCTTTCAACGACGGTTTGTGGCTGACGGATGCACTT
GCGCATGACTGTTGGCGTGGCCAGATTGGTTGGGTGGGTTCGTGAAAATA
TTTCCCGTGAAGGTACTTGTGATTGTAACCAAACGAGTCGTGTTCCAATT
AACTTGGATTTAGTATACATACAACCAAAGATCCTTAGTGTTACGATTTG
AATATGTGTAACCCTAAATGTGCCTAGTCCACAAATTTCGGAACACTTGA
ACCCTTTGGACGCTCGGGTTGGGTTCGGTTAGTTAGGTAGTGCTCATCGC
CCGAAACCCTTGAGGGAAATGCTAGCCGAGATGAAGTCCAAGATAAGTGT
TTCATGAGGAGCGTATGTATATATGTATGTTTGCATGCATGTGTGCATGT
ACGTAGGTATGTACGTGTATATAGGATTCAATGAGGCCTGCTGTAACAAT
TGTGCAGTTCTCATCCTGGGCGTTAGTGTGAAAGGCGACAGAAAGCGCAG
GATCCCAGAGAAAAAGAACGGATGCGAAACTTTGGATACTTTTCTGTTCT
ATGGGGTCACGTGCCGTTTCCGCTGACAGGGTGTGTTTTGAAAGTGTTCG
GGATAGCGGACGGAACTACATCAAACCCCAATTTCAGCCCCGCTAAGTAT
CTTAACCCCGACCGATTTGATCGATTGGACGAAAAACACATAATGAGTAA
GATGCTCGCAGATAGATGACTTGGATTATCTCTCAGGCGTGTTTATCTAG
CCTGGCGTTTCCCTCCCTCGGCTTAGGGTTAGTTCGGGCGATAGGGACTA
AAGGGTGAAGAGTCAAGTACTCTCGATGAACTCTTGACGTCGGTAATCCG
TCAGTAGTTTTCGGAGACGATATGTTGGATATTTTTGTGTATCGTTATTG
CGCACCGCGCTACTCGACTTGTGACTTGTATAGGCTGATTTTTATTTTGC
CGTTCCCTAGTCGAGGATACTCGTACCGTACCGTACCGTACCGTACCGTA
CCACGGCAAAAAAAAGGTCGTCTCCAGGAAGTCTAGAAGTTGAACCATTT
TAATGTGAAGGTCCAGTCACTGTCTGGAATTTCTTGTTGAAGATGTGAAG
TGGCGTGTCATCACGAGAATTTCAACCGTGTTGTCATGATGGTCTCTTCT
GGGCAAGTTCTACAAAGGCTGCTCACGAAGGGGGGGTGTTCTTTACTTGC
CAGTTACATGTGGTGTACTTTAGCCTCCAAGACAGTTTTTCGGAGCTCGC
CGAGTTTTTTTCTGCAAGCTCTTGTGACTTCTGCATTTTATGCTATGGGC
TTGGCTGGGCTGGAGGTGTGGATGCAGTCGAATCTGCTGGGCGTTAGGGC
TACCTTCGCATCAGTAGAGAGCTGATGTGGATTCACAGTCTACGTGCGCG
ATTTGGTGTCTGATGACCAATGTCTTGCAGAGCAAGCTCTCCACGTAAAC
TTCAACACGAAGGCTTTGCTCTTCGCATGATTCGACCGACCGACTGCATC
GAAAAATACCATAAAATGGGCCCTCGTTTTTTTCGTTTGAAGTAGTGTGC
TTCGTGAAGGATGTTTGTTTTGCTGAATGTTGTGTGAGAAATTCAACACA
CAACTCCGGGAGGCAACCTGCGATGACGGTTGAATACAAGTATCTGAATA
GGGTTGCGTGACGAGGGAGGAACGGTGCGAACATCGTGCATGACATGACG
TACACGAAATGTCGGAGGATATTTGTGCAGGTTAACTAGGGCTTTGGGTT
GAACATGTCGTGTGATGTAATGCCATGTCGGGCATATTCGAGTTGGGAGT
GGAAACTGCTTTCCAGCGGGCTAATAGTAAGTTTAGGCTTTGCATGCGCA
TCCCTGTTGGTGATGCGTGATACCTGGGTGTGACTCTTGGTGCGATGTAG
AGGCTGAACGTGTCTGTTGTCCGATCGTCGTGTTTTGGTTGCGGACAGAG
GAGGGTGACACCAAGGATGACCTTCAGCTGCCTTCGTTCCCCGAAGGCTT
CGGACAGGAGATCAAGAAGCAGTTCGATGATGGGAAGACGCTGGTGAGGG
TCTGGGGCGTAGGGGTCGTGTTGGGGGGTGCTTCGCTGGTTTTGCAGTGC
GTGCGCTGGCGTTGTGTCGCGTTGATCTCACGCTGGTCGTTGGTCCCTGC
CGTACTTCGTCGCCGTTTGTGTGTGACTTGCGCAGACGGTGACCGTCATG
GCTGCCATGGGGCATGAACAGATCGTCACCTACAAGGAAGAGGCCGCCTA
AATCGGTCTGGACGACCCGAGACGCTTGACACGGTTTGCGCTGTGTCCAT
TCGGCGGCCGGGAGCTTGAGCTGAGCTGAGCTGTGACCAGCTCTGGTTGA
AGGCCCATCAGTACGGCAAATCAACTCCCCACCTGGACGTAGCGTAGCTT
GTGGAGGGTGCTCCTCTAGGCATGAGGGGTGGGATGGGGGTGGGGGTGGG
GTGCGAAGACTGGAAATGATGAACGCACGATCTGAGTCGTGTCTCTTACC
GTTTGCCACCTTGTGTAACTGTCTCTAGAGAGTGTTGACAAAGGCAGGTT
GGGCTGCCTGGATTGATTGTGCGCAGGAGTTAGTGTATGGATGATGATGA
ATCGATTGATGCATGCATGCATGGATGAACAGGTTTTGTTTAGTGTGCAA
GGTGAAGAGGTGACGAGGTGAGGTGCCAAGGGGAAAAGGTCCAAAGGGAT
CGGCGATGTCGGGAGGGATGGGATATGGAGGCTAGGGGATTGTTGCCGCG
GAGTTTGGGAGCGATGATTGATTGGTTGGCTGAGAGTTGAACTTGAGCGC
CAGGTGCAACTGGTGAGCTGTAGCCAAACGACGGTGGCATGAGGCGAGGG
GAAGAGAAGAGAGGGAAGGCGAAATCTTCGTGGGGAATAATCTGTGCAAC
CTTCTGAGTACTGCCGGGAAGGTTGGGGGTGGGAGGAGTAGATCACCATC
CTCTTTCATCCGTTTGCACTTCAGTGCATGGCGTATACGCGTGAGGTCGT
GAGGATTTGAAACACGAAGTAGCACCTGCGTGAGGTGTACGGGGGGGGAC
ACGGCGAGCGATTTGGGCCTGTCATGGTTTGGCGTAGCCATCCCCGCCCG
AACTCCTTTGCGGCCTCTTGTGACCTCATGCGCCTCGTAATTTCCGAGGA
T
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Coding sequence (CDS) from alignment at D-dichotoma_M_contig1088:200355..206905-

>mRNA_D-dichotoma_M_contig1088.756.1 ID=mRNA_D-dichotoma_M_contig1088.756.1|Name=mRNA_D-dichotoma_M_contig1088.756.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=978bp|location=Sequence derived from alignment at D-dichotoma_M_contig1088:200355..206905- (Dictyota dichotoma ODC1387m male)
ATGGCCACCGAGGACAAGCTGAACGACTACGACTTCACGGGGACGGATGC
CGGTGCCTCGCACACCATCCCCTCCGAGGCTGGCCAAATTCGTAAAGGCG
GATACATCGTGATCAAGGGGCACCCCTGCAAGATGGCCACCGAGGACAAG
CTGAACGACTACGACTTCACGGGGACGGATGCCGGTGCCTCGCACACCAT
CCCCTCCGAGGCTGGCCAAATTCGTAAAGGCGGATACATCGTGATCAAGG
GGCACCCCTGCAAGGTGGTGAACGTTTCCACCTCGAAGACCGGCAAGCAC
GGACACGCCAAGGCTAACTTCACGGCGACCGACATCTTCACCGGGAAGAA
GCTGGAAGATGTGATCCCCTCCACCCACACCACCGCCGTTCCCGTGGTTC
GCCGCAACGAGTACCAGCTCCTCGACATCTCCGATGACGGATTCTGCTCT
CTGCTCACCGGTGGTGAACGTTTCCACCTCGAAGACCGGCAAGCACGGAC
ACGCCAAGGCTAACTTCACGGCGACCGACATCTTCACCGGGAAGAAGCTG
GAAGATGTGATCCCCTCCACCCACACCACCGCCGTTCCCGTGGTTCGCCG
CAACGAGTACCAGCTCCTCGACATCTCCGATGACGGATTCTGCTCTCTGC
TCACCGAGGAGGGTGACACCAAGGATGACCTTCAGCTGCCTTCGTTCCCC
GAAGGCTTCGGACAGGAGATCAAGAAGCAGTTCGATGATGGGAAGACGCT
GAGGAGGGTGACACCAAGGATGACCTTCAGCTGCCTTCGTTCCCCGAAGG
CTTCGGACAGGAGATCAAGAAGCAGTTCGATGATGGGAAGACGCTGACGG
TGACCGTCATGGCTGCCATGGGGCATGAACAGATCGTCACCTACAAGGAA
GAGGCCGCCTAAACGGTGACCGTCATGGCTGCCATGGGGCATGAACAGAT
CGTCACCTACAAGGAAGAGGCCGCCTAA
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