mRNA_D-dichotoma_M_contig1087.749.1 (mRNA) Dictyota dichotoma ODC1387m male
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Overview
Homology
BLAST of mRNA_D-dichotoma_M_contig1087.749.1 vs. uniprot
Match: D7FJG8_ECTSI (UDP-galactose translocator, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJG8_ECTSI) HSP 1 Score: 305 bits (780), Expect = 1.990e-100 Identity = 176/251 (70.12%), Postives = 197/251 (78.49%), Query Frame = 1
Query: 28 RPMLQAWTLWGSLQAAAFPAAAYALQNWLAQLAYGNLDSLTFNLLNQTKTLFAALSLYLVMGKRQSLLQIVALSLMLAAALLLNAAASG--DREGS-------KSSESSRRFWLGVLPVMGAAFLSGFTGAVTQRTLQRNCRNSFQLSLELAVYGVATLLVTSA--IWGP--VEGMWKHGLFRGWTPFTCLPVLSQAAGGLIVGQVTKHAGSLQKGFALIAGIFVTAVVQSTLESSTLTEAHWMAAALVVG 741
RPML++WTL GSL+AAA PAA YALQNWL+QLAY NLDSLTFNLLNQTKTLFAAL LYLVMGK+QS LQ+VALSL+LAAALLLN+ +SG + G+ +E S R WLGVLPVM AA +SG GAVTQRTLQR+ RNS QLSLELAVYGV TLL+TS I G V + F+GWT +TC+PVLSQAAGGLIVGQVTKHAGS+QKGFALI GI VTA VQST+E S LT HW AAALV G
Sbjct: 72 RPMLESWTLRGSLEAAALPAAGYALQNWLSQLAYMNLDSLTFNLLNQTKTLFAALCLYLVMGKKQSRLQLVALSLLLAAALLLNSGSSGGDSKAGTGERGLLTSEAEDSARLWLGVLPVMAAALMSGLMGAVTQRTLQRSGRNSSQLSLELAVYGVLTLLLTSGSGIGGSDAVTSAGRSSAFQGWTKWTCVPVLSQAAGGLIVGQVTKHAGSVQKGFALIGGILVTAAVQSTMEKSALTMTHWTAAALVAG 322
BLAST of mRNA_D-dichotoma_M_contig1087.749.1 vs. uniprot
Match: A0A835YMG2_9STRA (Putative UDP-galactose translocator n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMG2_9STRA) HSP 1 Score: 256 bits (653), Expect = 1.120e-81 Identity = 143/236 (60.59%), Postives = 183/236 (77.54%), Query Frame = 1
Query: 43 AWTLWGSLQAAAFPAAAYALQNWLAQLAYGNLDSLTFNLLNQTKTLFAALSLYLVMGKRQSLLQIVALSLMLAAALLLNAAASGDREGSKSSESSRRFWLGVLPVMGAAFLSGFTGAVTQRTLQRNCRNSFQLSLELAVYGVATLLVTS-AIWGPVE----GMWKHGLFRGWTPFTCLPVLSQAAGGLIVGQVTKHAGSLQKGFALIAGIFVTAVVQSTLESSTLTEAHWMAAALV 735
+WTL S++AAA PAA YALQNWL Q+AY NLDSLT+NLLNQTKTL AAL LY+VMG+RQS QIVAL++++AAALLLN+ + D++G+ S + LGV+PVMGA+ LSGF+ AVTQ++LQ RNS+ LS EL +YG+ TLLVT+ A G V+ GM + GL+RGWTP+TCLPV +QAAGG++VGQVTKHAGS++KGFAL+ GI VTA Q LE L+ H+++A LV
Sbjct: 57 SWTLKSSMKAAALPAALYALQNWLIQIAYMNLDSLTYNLLNQTKTLSAALCLYVVMGRRQSGPQIVALAMLVAAALLLNSRTASDKDGA----SGISWELGVVPVMGASLLSGFSAAVTQKSLQERGRNSYLLSAELGLYGIVTLLVTTLAAEGGVQVRRGGMLRDGLWRGWTPWTCLPVFTQAAGGVVVGQVTKHAGSVKKGFALVGGILVTAAAQYVLEREPLSPEHYVSAVLV 288
BLAST of mRNA_D-dichotoma_M_contig1087.749.1 vs. uniprot
Match: A0A835YXE8_9STRA (Putative UDP-galactose translocator n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXE8_9STRA) HSP 1 Score: 229 bits (583), Expect = 7.300e-71 Identity = 134/232 (57.76%), Postives = 169/232 (72.84%), Query Frame = 1
Query: 46 WTLWGSLQAAAFPAAAYALQNWLAQLAYGNLDSLTFNLLNQTKTLFAALSLYLVMGKRQSLLQIVALSLMLAAALLLNAAASGDREGSKSSESSRRFW-LGVLPVMGAAFLSGFTGAVTQRTLQRNCRNSFQLSLELAVYGVATLLVTSAI-WGPVEGMWKHGLFRGWTPFTCLPVLSQAAGGLIVGQVTKHAGSLQKGFALIAGIFVTAVVQSTLESSTLTEAHWMAAALV 735
WTL S++AAA PAA YALQNWL Q+ Y NLDSLTFNLLNQTKTL AA+ L+L+MG+RQS Q++AL +++AAALLLNA + G ++ W LG+LPV+GA+ LSGF+ AVTQ++LQ RNSF LS ELAVYGV TLL+ SA G ++G+W+ GWT T +PV++ A GG+IVGQVTKHAGS++KGFALI GI VTA Q LE L+ H+ +A LV
Sbjct: 83 WTLRSSVKAAALPAACYALQNWLTQIGYMNLDSLTFNLLNQTKTLSAAVCLFLIMGRRQSGPQVLALMMLVAAALLLNA-----QSGGLGDAAAPISWELGILPVVGASLLSGFSAAVTQKSLQERGRNSFLLSAELAVYGVLTLLLPSAASTGSLQGLWE-----GWTIRTVIPVVTNAMGGVIVGQVTKHAGSVKKGFALIGGILVTAAAQFILERQPLSREHYASAVLV 304
BLAST of mRNA_D-dichotoma_M_contig1087.749.1 vs. uniprot
Match: W7THR3_9STRA (Nucleotide-sugar transporter n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7THR3_9STRA) HSP 1 Score: 182 bits (461), Expect = 5.820e-52 Identity = 114/239 (47.70%), Postives = 155/239 (64.85%), Query Frame = 1
Query: 25 RRPMLQAWTLWGSLQAAAFPAAAYALQNWLAQLAYGNLDSLTFNLLNQTKTLFAALSLYLVMGKRQSLLQIVALSLMLAAALLLNAAASGDREGSKSSESSRRFWLGVLPVMGAAFLSGFTGAVTQRTLQRNCRNSFQLSLELAVYGVATL--LVTSAIWGPVEGMWKHGLFRGWTPFTCLPVLSQAAGGLIVGQVTKHAGSLQKGFALIAGIFVTAVVQSTLESSTLTEAHWMAAALV 735
R + WT+ SL+ AA PA+ YALQN +AQ Y LDSL+FNLLNQTKTL AA+ LY+VMG++Q+ LQ+VAL ++L A+++LN ++ S S F LGVLPV+ A+ SG A+TQ+TLQ RNS+ S ELA+YG L +V S + G L + +P LPV+ AAGG+IVG VTK+AG ++KGFALIAGI +TA+ QS ++ + + H +AA LV
Sbjct: 111 RAKLWATWTVRESLRVAALPASLYALQNTMAQFGYQYLDSLSFNLLNQTKTLAAAVCLYVVMGRKQTPLQLVALGMLLVASIILNWPSASP--ASSPSYDPTTFTLGVLPVLLASLTSGVCAALTQKTLQGASRNSYLFSAELALYGQVCLSVIVVSKYFFSSPGTSSLSLPKNLSPLALLPVVINAAGGIIVGLVTKYAGGVKKGFALIAGIALTALCQSMMQRTPPSRGHLLAACLV 347
BLAST of mRNA_D-dichotoma_M_contig1087.749.1 vs. uniprot
Match: A0A812JLU5_9DINO (ROCK1 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812JLU5_9DINO) HSP 1 Score: 179 bits (453), Expect = 7.800e-51 Identity = 106/238 (44.54%), Postives = 157/238 (65.97%), Query Frame = 1
Query: 40 QAWTLWGSLQAAAFPAAAYALQNWLAQLAYGNLDSLTFNLLNQTKTLFAALSLYLVMGKRQSLLQIVALSLMLAAALLL-----NAAASGDREGSKSSESSRRFWLGVLPVMGAAFLSGFTGAVTQRTLQ-RNCRNSFQLSLELAVYGVATLLVTSAIWGPVEGMWKHGLFRGWTPFTCLPVLSQAAGGLIVGQVTKHAGSLQKGFALIAGIFVTAVVQSTLESSTLTEAHWMAAALV 735
++W+L S+ A PA +++Q WL Q+ ++DSL+FNLLNQTKTL AAL YL++GKRQS +Q AL L+ +ALLL ++ +S D G+ + ++ F+ GVLPV+ AA SG T A+TQRTL+ RNS+ S+EL+++G A LL G G ++GW+ + LPV++QA GG++VG VTK++ S++KGFAL++GI +T + Q+ LE + LT H +AA LV
Sbjct: 115 RSWSLRESVLKAGLPAIMFSMQGWLLQVGQAHIDSLSFNLLNQTKTLSAALMCYLLLGKRQSRVQCFALVLLFVSALLLGTKGFSSKSSRDTAGADAGDA---FFFGVLPVVTAALSSGLTAAMTQRTLKGAQGRNSWLYSMELSMWGSACLLAGVCFSSDARGRLVQGPYQGWSALSVLPVMTQAVGGILVGLVTKYSDSVKKGFALVSGIVLTTLAQAVLEDAPLTSGHLIAAVLV 349
BLAST of mRNA_D-dichotoma_M_contig1087.749.1 vs. uniprot
Match: A0A812QLI2_9DINO (ROCK1 protein n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A812QLI2_9DINO) HSP 1 Score: 176 bits (447), Expect = 5.940e-50 Identity = 105/237 (44.30%), Postives = 156/237 (65.82%), Query Frame = 1
Query: 34 MLQAWTLWGSLQAAAFPAAAYALQNWLAQLAYGNLDSLTFNLLNQTKTLFAALSLYLVMGKRQSLLQIVALSLMLAAALLLNA--AASGDREGSKSSESSRRFWLGVLPVMGAAFLSGFTGAVTQRTLQRNC-RNSFQLSLELAVYGVATLLVTSAIWGPVEGMWKHGLFRGWTPFTCLPVLSQAAGGLIVGQVTKHAGSLQKGFALIAGIFVTAVVQSTLESSTLTEAHWMAAALV 735
+++AW+L S+ A PA +++Q WL Q+ ++DSL+FNLLNQTKTL AAL YL++G+RQS +Q AL L+ +ALLL +S + ++ +S F GVLPV+ AA SG T A+TQRTL+ + RNS+ S+EL+++G A L+ I G G ++GW+ + +PVL+QA GG++VG VTK++ S++KGFAL++GI +T + Q LE + LT H +AA LV
Sbjct: 113 IVRAWSLRESILKAGIPAIMFSMQGWLLQVGQAHVDSLSFNLLNQTKTLSAALMCYLLLGRRQSRIQCFALVLLFVSALLLGTKGCSSFKKHSARDGSASDAFVFGVLPVVVAALSSGLTAAMTQRTLKGSAGRNSWLYSMELSMWGSACLIAGVCI-SDKRGRLLQGPYQGWSALSVVPVLTQAVGGILVGLVTKYSDSVKKGFALVSGIVLTTLAQCVLEDAPLTSWHLIAAVLV 348
BLAST of mRNA_D-dichotoma_M_contig1087.749.1 vs. uniprot
Match: A0A7S1UAC1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UAC1_9STRA) HSP 1 Score: 174 bits (442), Expect = 2.280e-49 Identity = 113/246 (45.93%), Postives = 157/246 (63.82%), Query Frame = 1
Query: 28 RPMLQAWTLWGSLQAAAFPAAAYALQNWLAQLAYGNLDSLTFNLLNQTKTLFAALSLYLVMGKRQSLLQIVALSLMLAAALLLNAAASGDREGSKSSESSRRFW--LGVLPVMGAAFLSGFTGAVTQRTLQRNCRNSFQLSLELAVYGVATLLVTSAIWGPVEG--MWKHG----LFRGWTPFTCLPVLSQAAGGLIVGQVTKHAGSLQKGFALIAGIFVTAVVQSTLESSTLTEAHWMAAALVVG 741
R + ++W+L +L PA Y++QN L Q Y LD+LTFNLLNQ KT+FAA+ L+LV+GKRQS LQ+VAL +++ AA++LN G G + +SR W LG LPV+ A+ +SGFT A TQ+ L RNS+ S+ELAV G+ +LL G VEG + + G L G + LPVLS AAGG++VG V K+AG ++KGF L+ GI T +VQS +E +++T + A+ LVVG
Sbjct: 67 RDIAKSWSLRNALYCVVVPAVLYSIQNILVQSGYQYLDALTFNLLNQCKTIFAAVCLFLVLGKRQSFLQVVALLMLVTAAIILNLDKVG---GDAEAVASRDEWFQLGFLPVLLASLISGFTTAFTQKILTEK-RNSYLFSMELAVIGIISLLAKELSSG-VEGQEVLRTGNIAPLLVGMDAYVMLPVLSSAAGGIVVGLVVKYAGGVRKGFGLVLGILFTGLVQSIVEGTSITGLQYAASGLVVG 307
BLAST of mRNA_D-dichotoma_M_contig1087.749.1 vs. uniprot
Match: UPI0009F3639C (UDP-N-acetylglucosamine transporter ROCK1 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=UPI0009F3639C) HSP 1 Score: 173 bits (439), Expect = 3.060e-49 Identity = 95/224 (42.41%), Postives = 148/224 (66.07%), Query Frame = 1
Query: 34 MLQAWTLWGSLQAAAFPAAAYALQNWLAQLAYGNLDSLTFNLLNQTKTLFAALSLYLVMGKRQSLLQIVALSLMLAAALLLNAAASGDREGSKSSESSRRFWLGVLPVMGAAFLSGFTGAVTQRTLQRNCRNSFQLSLELAVYGVATLLVTSAIWGPVEGMW--KHGLFRGWTPFTCLPVLSQAAGGLIVGQVTKHAGSLQKGFALIAGIFVTAVVQSTLESST 699
+ WTL GSL A+ PAA YALQN L Q++Y NLDSLTF++LNQTK F A+ YL++G++QS+ Q+ ALSL++ AA+LL+ G +GS + + + G++PVM A+ LSG ++ Q Q S+ +++E++V G LL ++++ +G+ KHG F GWTP+T +PV+ A GG++VG VT HAG ++KGF +++ + VTA++Q +S +
Sbjct: 74 LFNQWTLMGSLTASGLPAAVYALQNSLLQISYKNLDSLTFSILNQTKLFFTAIFTYLILGQKQSVQQVGALSLLIIAAILLSVG-EGSTKGSGDKNADQVLFYGIVPVMVASVLSGLASSLCQWASQVKKHTSYLMTIEMSVVGSLCLL--ASLYKSPDGVAIKKHGFFYGWTPWTLVPVIFNAVGGILVGLVTAHAGGVRKGFVIVSALLVTALLQFIFDSKS 294
BLAST of mRNA_D-dichotoma_M_contig1087.749.1 vs. uniprot
Match: A0A0K9PYR4_ZOSMR (CMP-sialic acid transporter 5 n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PYR4_ZOSMR) HSP 1 Score: 172 bits (437), Expect = 7.670e-49 Identity = 93/215 (43.26%), Postives = 144/215 (66.98%), Query Frame = 1
Query: 34 MLQAWTLWGSLQAAAFPAAAYALQNWLAQLAYGNLDSLTFNLLNQTKTLFAALSLYLVMGKRQSLLQIVALSLMLAAALLLNAAASGDREGSKSSESSRRFWLGVLPVMGAAFLSGFTGAVTQRTLQRNCRNSFQLSLELAVYGVATLLVTSAIWGPVEGMWKHGLFRGWTPFTCLPVLSQAAGGLIVGQVTKHAGSLQKGFALIAGIFVTAVVQ 678
+++ WTL G+L A+ PAA YALQN L Q++Y NLDSLTF++LNQTK LF ALS+YL++G +QS Q+ AL+L++ AA+LL+ S R GS + ++ F G++PV+ A+ LSG ++ Q Q S+ +++E+++ G LL++++ E + K+G F GWT T +PV A GG++VG VT HAG ++KGF +++ + VTA +Q
Sbjct: 82 LIKEWTLVGALTASGLPAAIYALQNSLLQISYKNLDSLTFSILNQTKLLFTALSVYLILGNKQSPKQLGALALLICAAILLSIGESSGR-GSSGDDPNQTFIYGIIPVLVASVLSGLASSLCQWASQVKKHASYLMTIEMSIVGCLCLLISTSKSPDGEAIRKNGFFYGWTALTLIPVFMNAIGGILVGLVTTHAGGVKKGFVIVSALLVTAFLQ 295
BLAST of mRNA_D-dichotoma_M_contig1087.749.1 vs. uniprot
Match: W1PU78_AMBTC (Uncharacterized protein n=2 Tax=Amborella trichopoda TaxID=13333 RepID=W1PU78_AMBTC) HSP 1 Score: 171 bits (432), Expect = 3.060e-48 Identity = 94/219 (42.92%), Postives = 142/219 (64.84%), Query Frame = 1
Query: 22 PRRPMLQAWTLWGSLQAAAFPAAAYALQNWLAQLAYGNLDSLTFNLLNQTKTLFAALSLYLVMGKRQSLLQIVALSLMLAAALLLNAAASGDREGSKSSESSRRFWLGVLPVMGAAFLSGFTGAVTQRTLQRNCRNSFQLSLELAVYGVATLLVTSAIWGPVEGMWKHGLFRGWTPFTCLPVLSQAAGGLIVGQVTKHAGSLQKGFALIAGIFVTAVVQ 678
P R + WTL GSL A+ PAA YALQN L Q++Y NLDSLTF++LNQTK F AL +YL++G++QS+ QI AL L++ AALL++ G S + + F+ G++P++ A+ LSG ++ Q Q +S+ +++E++ G LL ++ + +HG F GWTPFT +PVL+ A GG++VG VT HAG + KGF +++ + VTA++Q
Sbjct: 66 PLRSFYRQWTLTGSLTASGLPAAIYALQNSLLQISYKNLDSLTFSMLNQTKLFFTALFMYLMLGQKQSVQQIGALVLLIIAALLISIG-EGSGGSSGGANPDQVFFHGIVPILVASVLSGLASSLCQWASQVKKHSSYLMTVEMSFIGSLCLLASTYKSPDGQAFRQHGFFHGWTPFTLIPVLTNAIGGILVGLVTTHAGGVMKGFVIVSALLVTALLQ 283 The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1087.749.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dichotoma_M_contig1087.749.1 >prot_D-dichotoma_M_contig1087.749.1 ID=prot_D-dichotoma_M_contig1087.749.1|Name=mRNA_D-dichotoma_M_contig1087.749.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=247bp RDCPLWKPRRPMLQAWTLWGSLQAAAFPAAAYALQNWLAQLAYGNLDSLTback to top mRNA from alignment at D-dichotoma_M_contig1087:219727..224121- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dichotoma_M_contig1087.749.1 ID=mRNA_D-dichotoma_M_contig1087.749.1|Name=mRNA_D-dichotoma_M_contig1087.749.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=4395bp|location=Sequence derived from alignment at D-dichotoma_M_contig1087:219727..224121- (Dictyota dichotoma ODC1387m male)back to top Coding sequence (CDS) from alignment at D-dichotoma_M_contig1087:219727..224121- >mRNA_D-dichotoma_M_contig1087.749.1 ID=mRNA_D-dichotoma_M_contig1087.749.1|Name=mRNA_D-dichotoma_M_contig1087.749.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=1482bp|location=Sequence derived from alignment at D-dichotoma_M_contig1087:219727..224121- (Dictyota dichotoma ODC1387m male)back to top |