mRNA_D-dichotoma_M_contig1080.703.1 (mRNA) Dictyota dichotoma ODC1387m male
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Overview
Homology
BLAST of mRNA_D-dichotoma_M_contig1080.703.1 vs. uniprot
Match: D7G1T0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1T0_ECTSI) HSP 1 Score: 113 bits (282), Expect = 8.130e-26 Identity = 56/137 (40.88%), Postives = 83/137 (60.58%), Query Frame = 1
Query: 1 MLIENYLTGINALIIILYAKDKLTSKGWFFSHSRLPEVYFYLLELAGGSPGAYVAQRIFNHKLSKERFQQDFFEVLLLQIAGGAAWWYWRGGSIALAGCGTVTMLMLIGTRIQICKL-HKRQPKSRLPKPWQKPVSL 408
M++ Y G NAL + A+DK +SKGW R+PE + +EL GGSPG+++ QR+F HK+SK +Q+ F +VL +QIA AW Y+ G S AL G G +M T ++ L H+ ++R +PWQ+PV +
Sbjct: 1 MILAAYFVGANALSFAMLAEDKASSKGWIPFLGRIPEALLHQVELVGGSPGSFLGQRVFRHKISKLAYQRSFSQVLAVQIAASIAWGYFHGPSWALLGMGLAPAVMFAATARRMSTLKHRDNARNRWNQPWQRPVDV 137
BLAST of mRNA_D-dichotoma_M_contig1080.703.1 vs. uniprot
Match: A0A6H5K9I2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9I2_9PHAE) HSP 1 Score: 108 bits (269), Expect = 5.040e-24 Identity = 55/137 (40.15%), Postives = 84/137 (61.31%), Query Frame = 1
Query: 1 MLIENYLTGINALIIILYAKDKLTSKGWFFSHSRLPEVYFYLLELAGGSPGAYVAQRIFNHKLSKERFQQDFFEVLLLQIAGGAAWWYWRGGSIALAGCGTVTMLMLIGTRIQICKL-HKRQPKSRLPKPWQKPVSL 408
M++ + G+NAL + A+DK +SKG R+PE + +ELAGGSPG+++ QR+F HK+SK +Q+ F +VL QIA AW Y+ G S AL G G ++M T ++ L H+ ++R +PWQ+PV +
Sbjct: 1 MILAAFFVGVNALSFAMLAEDKASSKGLIPFLGRIPEALLHQVELAGGSPGSFLGQRVFQHKISKLAYQRGFSQVLAAQIAANIAWGYFHGPSWALLGVGLAPVVMFAATARRMNTLKHQDSTRNRWHQPWQRPVDV 137
BLAST of mRNA_D-dichotoma_M_contig1080.703.1 vs. uniprot
Match: A0A7V5MHI5_9BACT (DUF1294 domain-containing protein n=1 Tax=Candidatus Moranbacteria bacterium TaxID=2045217 RepID=A0A7V5MHI5_9BACT) HSP 1 Score: 68.9 bits (167), Expect = 1.780e-10 Identity = 36/89 (40.45%), Postives = 50/89 (56.18%), Query Frame = 1
Query: 16 YLTGINALIIILYAKDKLTSKGWFFSHSRLPEVYFYLLELAGGSPGAYVAQRIFNHKLSKERFQQDFFEVLLLQIAGGAAWWYWRGGSI 282
YLT +N + +ILY DK + R+PE +L LAGGSP A++AQR+F HK RF+ FF +++ QI WW G S+
Sbjct: 36 YLTAVNLMTLILYLYDKAVAGT---RAPRVPEAILHLGALAGGSPAAWLAQRLFRHKTISPRFRVIFFSIVVAQILLFLLWWRLSGASL 121
BLAST of mRNA_D-dichotoma_M_contig1080.703.1 vs. uniprot
Match: A0A3D5BF39_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3D5BF39_9PROT) HSP 1 Score: 67.8 bits (164), Expect = 6.810e-10 Identity = 37/82 (45.12%), Postives = 50/82 (60.98%), Query Frame = 1
Query: 1 MLIENYLTGINALIIILYAKDKLTSK--GWFFSHSRLPEVYFYLLELAGGSPGAYVAQRIFNHKLSKERFQQDFFEVLLLQI 240
M + +L IN + I Y DK +K W R+PEV +LLEL GGSPGA+VAQ++F+HK K+ FQ F VL +Q+
Sbjct: 56 MFVPLHLVLINLVTITAYGADKRAAKTKAW-----RVPEVQLHLLELLGGSPGAFVAQKMFHHKTKKKSFQISFVFVLAIQV 132
BLAST of mRNA_D-dichotoma_M_contig1080.703.1 vs. uniprot
Match: A0A6P0ZG43_9CYAN (DUF1294 domain-containing protein n=1 Tax=Sphaerospermopsis sp. SIO1G2 TaxID=2607815 RepID=A0A6P0ZG43_9CYAN) HSP 1 Score: 66.2 bits (160), Expect = 8.050e-10 Identity = 33/75 (44.00%), Postives = 48/75 (64.00%), Query Frame = 1
Query: 16 YLTGINALIIILYAKDKLTSKGWFFSHSRLPEVYFYLLELAGGSPGAYVAQRIFNHKLSKERFQQDFFEVLLLQI 240
YL +N + + Y KDK ++ FS R+PE +LL LAGG+P A++AQR+ HK K+ FQ F+ +LL+QI
Sbjct: 22 YLALVNLITFLAYRKDKQAAR---FSEWRIPESTLHLLMLAGGTPAAFIAQRVLRHKTRKQPFQLVFWFLLLMQI 93
BLAST of mRNA_D-dichotoma_M_contig1080.703.1 vs. uniprot
Match: UPI001671A505 (DUF1294 domain-containing protein n=1 Tax=Paludibacterium paludis TaxID=1225769 RepID=UPI001671A505) HSP 1 Score: 61.2 bits (147), Expect = 6.100e-8 Identity = 35/90 (38.89%), Postives = 50/90 (55.56%), Query Frame = 1
Query: 7 IENYLTGINALIIILYAKDKLTSKGWFFSHSRLPEVYFYLLELAGGSPGAYVAQRIFNHKLSKERFQQDFFEVLLLQIAGGAAWWYWRGG 276
++ YL L ILY+ DK + R+PE +L+ELAGG PGA +AQR+ HK SK R+Q F+ ++ + A AW +W G
Sbjct: 28 VQLYLAA-GCLTFILYSFDKWRAVR---GGRRVPETTLHLMELAGGWPGALIAQRLLRHKCSKSRYQWVFWLIVAVHYAAWGAW-FWVAG 112
BLAST of mRNA_D-dichotoma_M_contig1080.703.1 vs. uniprot
Match: UPI00186884F1 (DUF1294 domain-containing protein n=1 Tax=Microbulbifer taiwanensis TaxID=986746 RepID=UPI00186884F1) HSP 1 Score: 59.7 bits (143), Expect = 3.990e-7 Identity = 36/96 (37.50%), Postives = 53/96 (55.21%), Query Frame = 1
Query: 37 LIIILYAKDKLTSKGWFFSHSRLPEVYFYLLELAGGSPGAYVAQRIFNHKLSKERFQQDFFEVLLLQIAGGAAWWYWRGGSIALAGCGTVTMLMLI 324
L +I+YA DK+ + + R+ E +L+ LAGG PGA +AQ++FNHK +K F+ F+ +L I GG W + G AL G M L+
Sbjct: 45 LALIVYAMDKVAA---LENRRRISENRLHLIALAGGWPGALIAQKLFNHKTTKRPFRIVFWITVL--INGGVVGWTFTDGGSALLTRGMAEMERLV 135
BLAST of mRNA_D-dichotoma_M_contig1080.703.1 vs. uniprot
Match: UPI00100B4394 (cold shock and DUF1294 domain-containing protein n=2 Tax=unclassified Luteimonas TaxID=2629088 RepID=UPI00100B4394) HSP 1 Score: 60.8 bits (146), Expect = 5.430e-7 Identity = 29/71 (40.85%), Postives = 45/71 (63.38%), Query Frame = 1
Query: 46 ILYAKDKLTSKGWFFSHSRLPEVYFYLLELAGGSPGAYVAQRIFNHKLSKERFQQDFFEVLLLQIAGGAAW 258
++YA DK ++G R+PE++ + LELAGG PGA +AQR+ +HK K +Q F+ V+ L ++ AW
Sbjct: 132 LVYAADKRAAQG---RRRRVPEIHLHALELAGGWPGALLAQRMLHHKSRKRSYQAVFWIVVALNVSAVVAW 199
BLAST of mRNA_D-dichotoma_M_contig1080.703.1 vs. uniprot
Match: A0A4Z1R1P2_9GAMM (DUF1294 domain-containing protein n=3 Tax=Luteimonas yindakuii TaxID=2565782 RepID=A0A4Z1R1P2_9GAMM) HSP 1 Score: 60.5 bits (145), Expect = 1.070e-6 Identity = 32/80 (40.00%), Postives = 48/80 (60.00%), Query Frame = 1
Query: 46 ILYAKDKLTSKGWFFSHSRLPEVYFYLLELAGGSPGAYVAQRIFNHKLSKERFQQDFFEVLLLQIAGGAAWWYWRGGSIA 285
++YA DK ++ R+PE++ + LELAGG PGA +AQR+ +HK K +Q F+ V++L +A AW G IA
Sbjct: 151 LVYAADKRAAQA---RRQRVPELHLHALELAGGWPGALLAQRMLHHKSRKRSYQAVFWIVVVLNVAAVIAWPELAGRGIA 227
BLAST of mRNA_D-dichotoma_M_contig1080.703.1 vs. uniprot
Match: UPI001F228B4A (DUF1294 domain-containing protein n=1 Tax=Ideonella sp. A 288 TaxID=1962181 RepID=UPI001F228B4A) HSP 1 Score: 59.7 bits (143), Expect = 1.850e-6 Identity = 30/74 (40.54%), Postives = 46/74 (62.16%), Query Frame = 1
Query: 31 NALIIILYAKDKLTSK--GWFFSHSRLPEVYFYLLELAGGSPGAYVAQRIFNHKLSKERFQQDFFEVLLLQIAG 246
+A+ + YA DK ++ GW R+PE +LL LAGG PGA VAQ++F HK +K F+ F+ +++ +AG
Sbjct: 139 SAITLAFYASDKAAARRGGW-----RVPEQTLHLLALAGGWPGALVAQQVFRHKTTKASFRAVFWGTVIVNVAG 207 The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1080.703.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dichotoma_M_contig1080.703.1 >prot_D-dichotoma_M_contig1080.703.1 ID=prot_D-dichotoma_M_contig1080.703.1|Name=mRNA_D-dichotoma_M_contig1080.703.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=159bp MLIENYLTGINALIIILYAKDKLTSKGWFFSHSRLPEVYFYLLELAGGSPback to top mRNA from alignment at D-dichotoma_M_contig1080:187767..190414+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dichotoma_M_contig1080.703.1 ID=mRNA_D-dichotoma_M_contig1080.703.1|Name=mRNA_D-dichotoma_M_contig1080.703.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=2648bp|location=Sequence derived from alignment at D-dichotoma_M_contig1080:187767..190414+ (Dictyota dichotoma ODC1387m male)back to top Coding sequence (CDS) from alignment at D-dichotoma_M_contig1080:187767..190414+ >mRNA_D-dichotoma_M_contig1080.703.1 ID=mRNA_D-dichotoma_M_contig1080.703.1|Name=mRNA_D-dichotoma_M_contig1080.703.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=954bp|location=Sequence derived from alignment at D-dichotoma_M_contig1080:187767..190414+ (Dictyota dichotoma ODC1387m male)back to top |