mRNA_D-dichotoma_M_contig1006.140.1 (mRNA) Dictyota dichotoma ODC1387m male
Overview
Homology
BLAST of mRNA_D-dichotoma_M_contig1006.140.1 vs. uniprot
Match: D8LC47_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC47_ECTSI) HSP 1 Score: 209 bits (531), Expect = 2.920e-59 Identity = 98/217 (45.16%), Postives = 135/217 (62.21%), Query Frame = 2 Query: 242 RCGCLGHNLIQGDDYKAVLRHIRLGQELLEGQDEDTKRTVVKMICDSNSNPGDHLQSISPLDPVFWPIHPTIERLWQYKLLSGTMTNMSWPDENIDASMTDGTSKREIISLYSEDCDGHRGSDVYPFGLLDGVLDDM-VRTGLMDAILKSESDSGDVAGERGNATNRQAAGNTLTNRELLAALDPRRDSLTYIYDAFRWDHCMGEGFDFNDVWNASR 889 +CGCLG++L QG+DY+ + + + + +L D+D KR V +IC + N GDHLQ+ S LDP FWP HPT+ERLW Y +L+G +T+ +WPD+++ + DGT + E ISLY E C GHRGSDV+PFGLLD D ++TG+ RGN GN LTNRE L A D R +SL Y+YD F+W HC +G +F+D W ++ Sbjct: 61 QCGCLGYDLTQGNDYEDIFDRLTMAESILGDADDDVKREVTSIICSTPVNDGDHLQASSSLDPSFWPTHPTMERLWMYSILTGHITDFTWPDDDVTVTKPDGTVEVESISLYGETCSGHRGSDVFPFGLLDSDTDGFTIKTGI-----------------RGNLD----TGNQLTNREALQAFDARSNSLPYVYDTFKWTHCEADGVNFDDAWENAK 256
BLAST of mRNA_D-dichotoma_M_contig1006.140.1 vs. uniprot
Match: A0A6H5J7R8_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7R8_9PHAE) HSP 1 Score: 206 bits (523), Expect = 5.860e-54 Identity = 96/217 (44.24%), Postives = 135/217 (62.21%), Query Frame = 2 Query: 242 RCGCLGHNLIQGDDYKAVLRHIRLGQELLEGQDEDTKRTVVKMICDSNSNPGDHLQSISPLDPVFWPIHPTIERLWQYKLLSGTMTNMSWPDENIDASMTDGTSKREIISLYSEDCDGHRGSDVYPFGLLDGVLDDM-VRTGLMDAILKSESDSGDVAGERGNATNRQAAGNTLTNRELLAALDPRRDSLTYIYDAFRWDHCMGEGFDFNDVWNASR 889 +CGCLG++L QG DY+ + + + ++ D++ KR V +IC + +N GDHLQ+ S LDP FWP HPT+ERLW Y +L+G +T+ +WPD ++ + DGT + E ISLY + C GHRGSDV+PFGLLD DD ++TG+ RGN GN LTNRE+L A D R +SL Y+YD F+W HC +G +F+D W ++ Sbjct: 529 QCGCLGYDLTQGTDYQDIFDRLTMADSIIGDVDDEVKREVTSIICGTPANDGDHLQASSSLDPSFWPTHPTMERLWMYSILTGHITDFTWPDGDVTVTKPDGTVEVESISLYGDTCTGHRGSDVFPFGLLDSDTDDFTIKTGI-----------------RGNPD----TGNQLTNREVLQAFDARSNSLPYVYDTFKWTHCEADGVNFDDAWENAK 724
BLAST of mRNA_D-dichotoma_M_contig1006.140.1 vs. uniprot
Match: A0A6H5J676_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J676_9PHAE) HSP 1 Score: 202 bits (514), Expect = 1.030e-52 Identity = 97/214 (45.33%), Postives = 134/214 (62.62%), Query Frame = 2 Query: 245 CGCLGHNLIQGDDYKAVLRHIRLGQELLEGQDEDTKRTVVKMICDSNSNPGDHLQSISPLDPVFWPIHPTIERLWQYKLLSGTMTNMSWPDENIDASMTDGTSKREIISLYSEDCDGHRGSDVYPFGLLDGVLDDM-VRTGLMDAILKSESDSGDVAGERGNATNRQAAGNTLTNRELLAALDPRRDSLTYIYDAFRWDHCMGEGFDFNDVWNA 883 CGC G++L QGDDY + + +EL+ DE+TKR +V+++C + N GDHLQS S LDP FW HPT+ERLW Y +L+G +T+ WPD ++ + +DGT+ + IS YSE+C GHRGSDV+PF +L ++D V+TG+ + L GNT+TNRE+LAA DPR ++L Y+YD F W HC +GFD D W A Sbjct: 512 CGCHGYDLTQGDDYLQIFESMVFMKELMGDSDENTKRELVRVMCSTPINEGDHLQSSSSLDPSFWSTHPTMERLWMYSVLTGQVTDFEWPDADVTYTASDGTTYSQPISKYSEECLGHRGSDVFPFDILANEVNDFTVQTGIKGSPL--------------------GGGNTMTNREVLAAFDPRINALPYVYDTFEWAHCAEDGFDLRDAWLA 705
BLAST of mRNA_D-dichotoma_M_contig1006.140.1 vs. uniprot
Match: D8LC46_ECTSI (Tyrosinase_Cu-bd domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LC46_ECTSI) HSP 1 Score: 202 bits (514), Expect = 1.380e-52 Identity = 97/216 (44.91%), Postives = 133/216 (61.57%), Query Frame = 2 Query: 242 RCGCLGHNLIQGDDYKAVLRHIRLGQELLEGQDEDTKRTVVKMICDSNSNPGDHLQSISPLDPVFWPIHPTIERLWQYKLLSGTMTNMSWPDENIDASMTDGTSKREIISLYSEDCDGHRGSDVYPFGLLDGVLDDM-VRTGLMDAILKSESDSGDVAGERGNATNRQAAGNTLTNRELLAALDPRRDSLTYIYDAFRWDHCMGEGFDFNDVWNAS 886 +CGC G++L QGDDY+++ +I +L+ D D KR VV +C + N GDHLQ+ S LDP F+ HPT+ERLW Y +L+G +T+ +WPD+++ + DGT + E +SLY E C GH GSDV+PFG+LD D V+TG+ GNTLTNRELL A D R +S++Y+YD F+W HC +GFDFND WN + Sbjct: 564 QCGCRGYDLTQGDDYESIYYNIVDLDDLIGDFDADVKRQVVAALCTTTMNDGDHLQASSSLDPSFYATHPTMERLWMYAVLTGQITDFTWPDDDVTITKPDGTVEVESLSLYGETCQGHGGSDVFPFGILDSDTDGFEVKTGVKG----------------------MENGNTLTNRELLQAFDARSNSVSYVYDTFKWTHCEADGFDFNDAWNGA 757
BLAST of mRNA_D-dichotoma_M_contig1006.140.1 vs. uniprot
Match: D8LC42_ECTSI (TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC42_ECTSI) HSP 1 Score: 200 bits (509), Expect = 5.700e-52 Identity = 100/237 (42.19%), Postives = 137/237 (57.81%), Query Frame = 2 Query: 242 RCGCLGHNLIQGDDYKAVLRHIRLGQELLEGQDEDTKRTVVKMICDSNSNPGDHLQSISPLDPVFWPIHPTIERLWQYKLLSGTMTNMSWPDENIDASMTDGTSKREIISLYSEDCDGHRGSDVYPFGLLDGVLDDM-VRTGLMDAILKSESDSGDVAGERGNATNRQAAGNTLTNRELLAALDPRRDSLTYIYDAFRWDHCMGEGFDFNDVWNASRH-----DLQPDSQVGLSRFP 934 RCGCLG+NL +G+DY+ + + + +++ D DTKR VV+ IC + GDHLQ+ S LDP FW HPT+ERLW Y +L+G +T+ SWPD ++ + DGT E +S Y E C GH GSDV+PFGLLD D ++TG+ + A GN LTNRE L A DPR ++L Y+YD F W+HC +G+DF D W +S +P + G+ R P Sbjct: 549 RCGCLGYNLTEGNDYERIYHTMSVIDDVIGDYDADTKRQVVEAICTTTLVDGDHLQASSSLDPSFWSTHPTMERLWMYVVLTGQITDWSWPDADVTYTTPDGTVVTESLSEYEESCFGHHGSDVFPFGLLDTDTDGFEIKTGI---------------------SFNSATGNELTNREALQAFDPRINALPYVYDTFNWEHCAADGYDFGDAWQSSTKKSKSTSARPAFEDGVPRAP 764
BLAST of mRNA_D-dichotoma_M_contig1006.140.1 vs. uniprot
Match: D8LC28_ECTSI (TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC28_ECTSI) HSP 1 Score: 195 bits (496), Expect = 1.800e-50 Identity = 99/226 (43.81%), Postives = 139/226 (61.50%), Query Frame = 2 Query: 242 RCGCLGHNLIQGDDYKAVLRHIRLGQELLEGQDEDTKRTVVKMICDSNSNPGDHLQSISPLDPVFWPIHPTIERLWQYKLLSGTMTNMSWPDENIDASMTDGTSKREIISLYSEDCDGHRGSDVYPFGLLDGVLDDM-VRTGLMDAILKSESDSGDVAGERGNATNRQAAGNTLTNRELLAALDPRRDSLTYIYDAFRWDHCMGEGFDFNDVWNASRHDLQPDSQV 916 +CGC G++L QG DYK V+ + ++L+ D+ T+R VV+ +C N G H QS S DP+FWPIHPT+ERL+Q+ +L+G++ + W D + + + DGT+ EI S+YS+ C GH GSDV+P+ LLD D V+TG+ RG + GN LTNRE+LAALDPR +SL+Y+YD F W HC +GFDFND W+ D +P S+ Sbjct: 491 QCGCHGYDLTQGSDYKIVMESMEYLEDLIGDFDDTTQRKVVETLCTGVVNFGSHTQSSSSYDPLFWPIHPTMERLYQFPVLTGSIDDFFWTDADTNVTFADGTTVSEITSVYSDHCIGHHGSDVFPYYLLDTDTDGFEVKTGI-----------------RG----QPILGNMLTNREILAALDPRANSLSYVYDKFEWSHCEADGFDFNDAWD----DTEPSSRT 691
BLAST of mRNA_D-dichotoma_M_contig1006.140.1 vs. uniprot
Match: D8LB18_ECTSI (ShTK domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB18_ECTSI) HSP 1 Score: 186 bits (473), Expect = 1.310e-48 Identity = 95/217 (43.78%), Postives = 129/217 (59.45%), Query Frame = 2 Query: 242 RCGCLGHNLIQGDDYKAVLRHIRLG-QELLEGQDEDTKRTVVKMICDSNSNPGDHLQSISPLDPVFWPIHPTIERLWQYKLLSGTMTNMSWPDENIDASMTDGTSKREIISLYSEDCDGHRGSDVYPFGLL-DGVLDDMVRTGLMDAILKSESDSGDVAGERGNATNRQAAGNTLTNRELLAALDPRRDSLTYIYDAFRWDHCMGEGFDFNDVWNAS 886 +CGCLG++L QGDD+K + + L +++ D+ TKR VV +C S GDHL + S LDP FWP+HPT+ERL+ + L+G +T+ WPD S +DG + E S Y + C GH GSDV+PFGLL D ++TG++ GN + GN LTNRE+LA LD R + L Y+YD FRWDHC+ +G DF D W+AS Sbjct: 317 KCGCLGYDLSQGDDWKTIYTNSTLDFDDVIGDYDDKTKRQVVAAVCASTIYDGDHLHAGSSLDPTFWPMHPTMERLFMFSSLTGQLTDFYWPDSEFSYSDSDGNTVVETTSKYGDTCHGHSGSDVFPFGLLEDDDAGFKIKTGML-----------------GN----EETGNKLTNREVLAVLDARYNMLPYVYDDFRWDHCLQDGIDFYDAWDAS 512
BLAST of mRNA_D-dichotoma_M_contig1006.140.1 vs. uniprot
Match: D7G9A4_ECTSI (Ortho-aminophenol oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A4_ECTSI) HSP 1 Score: 188 bits (477), Expect = 4.420e-48 Identity = 95/216 (43.98%), Postives = 130/216 (60.19%), Query Frame = 2 Query: 242 RCGCLGHNLIQGDDYKAVLRHIRLG-QELLEGQDEDTKRTVVKMICDSNSNPGDHLQSISPLDPVFWPIHPTIERLWQYKLLSGTMTNMSWPDENIDASMTDGTSKREIISLYSEDCDGHRGSDVYPFGLLDGVLDDM-VRTGLMDAILKSESDSGDVAGERGNATNRQAAGNTLTNRELLAALDPRRDSLTYIYDAFRWDHCMGEGFDFNDVWNA 883 +CGCLG++L QGDD+K + + L +++ D++TKR VV +C S GDHL + S LDP FWP+HPT+ERL+ + L+G +T+ WPD S +DG + E S Y + C GH GSDV+PFGLLD D ++TG+ +GN + GN LTNRE+LA LD R + L Y+YD FRWDHC+ +G DF D W+A Sbjct: 488 KCGCLGYDLNQGDDWKTIYTNSTLDFDDVIGDYDDETKRQVVAAVCASTIYDGDHLHAGSSLDPTFWPMHPTMERLFMFSSLTGQLTDFHWPDSEFSYSDSDGNTVVETTSTYGDTCHGHGGSDVFPFGLLDDDDDAFKIKTGM-----------------QGN----EETGNKLTNREVLAVLDARYNMLPYVYDNFRWDHCLQDGIDFYDAWDA 682
BLAST of mRNA_D-dichotoma_M_contig1006.140.1 vs. uniprot
Match: D7FW00_ECTSI (Ortho-aminophenol oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW00_ECTSI) HSP 1 Score: 181 bits (459), Expect = 1.470e-45 Identity = 92/217 (42.40%), Postives = 127/217 (58.53%), Query Frame = 2 Query: 242 RCGCLGHNLIQGDDYKAVLRHIRLG-QELLEGQDEDTKRTVVKMICDSNSNPGDHLQSISPLDPVFWPIHPTIERLWQYKLLSGTMTNMSWPDENIDASMTDGTSKREIISLYSEDCDGHRGSDVYPFGLLDGVLDDM-VRTGLMDAILKSESDSGDVAGERGNATNRQAAGNTLTNRELLAALDPRRDSLTYIYDAFRWDHCMGEGFDFNDVWNAS 886 +CGCLG++L QGDD+K + + + +++ D++TKR VV +C S GDHL + S LDP FW +HPT+ERL+ + L+G +T+ WPD + +DG E +Y + C GH GSDV+PF LLDG D ++TG+ GN GN LTNRE+LA LD R + L Y+YD FRWDHC+ +G DF D W+AS Sbjct: 490 KCGCLGYDLSQGDDWKTIYTNSTVDFDDVIGDYDDETKRQVVAAVCASTIFDGDHLHAGSSLDPTFWAMHPTMERLFMFSSLTGQLTDFHWPDSEFSYTDSDGNIVVETTGIYGDTCHGHGGSDVFPFDLLDGDDDAFQIKTGMP-----------------GNGE----TGNKLTNREVLAVLDARFNMLPYVYDNFRWDHCLKDGIDFEDAWDAS 685
BLAST of mRNA_D-dichotoma_M_contig1006.140.1 vs. uniprot
Match: A0A6H5K485_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K485_9PHAE) HSP 1 Score: 180 bits (456), Expect = 9.770e-45 Identity = 99/251 (39.44%), Postives = 138/251 (54.98%), Query Frame = 2 Query: 170 SLPAFLVDYFLVNSVVV*GLSPPVRCGCLGHNLIQGDDYKAVLRHIRLG-QELLEGQDEDTKRTVVKMICDSNSNPGDHL----------QSISPLDPVFWPIHPTIERLWQYKLLSGTMTNMSWPDENIDASMTDGTSKREIISLYSEDCDGHRGSDVYPFGLLDGVLDDM-VRTGLMDAILKSESDSGDVAGERGNATNRQAAGNTLTNRELLAALDPRRDSLTYIYDAFRWDHCMGEGFDFNDVWNAS 886 S F + F + L +CGCLG+NL QGDD+K + + + + D++TKR VV +C S GDHL ++ S LDP FWP+HPTIERL+ + L+G +TN WPD + + T+G + E S Y + C GH GSDV+PFGLLD D + ++TG+ +GN GNTLTNRE LA +D R ++L Y+YD F+W+HC+ G DF+D W+AS Sbjct: 575 SYGMFGCEGFAAEGIPTDELLSSGKCGCLGYNLSQGDDWKTIYANPTSNLDDFIGDYDDETKRQVVAAVCASTIYYGDHLHVSVRALFGHEAGSSLDPTFWPMHPTIERLFVFSALTGQLTNFHWPDSELSYTDTNGDTVVETTSNYGDKCYGHGGSDVFPFGLLDNDDDALKIKTGM-----------------QGNGE----TGNTLTNREALANMDGRFNNLPYVYDNFKWEHCLDSGIDFDDAWDAS 804 The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1006.140.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dichotoma_M_contig1006.140.1 >prot_D-dichotoma_M_contig1006.140.1 ID=prot_D-dichotoma_M_contig1006.140.1|Name=mRNA_D-dichotoma_M_contig1006.140.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=207bp MICDSNSNPGDHLQSISPLDPVFWPIHPTIERLWQYKLLSGTMTNMSWPDback to top mRNA from alignment at D-dichotoma_M_contig1006:36518..39038- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dichotoma_M_contig1006.140.1 ID=mRNA_D-dichotoma_M_contig1006.140.1|Name=mRNA_D-dichotoma_M_contig1006.140.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=2521bp|location=Sequence derived from alignment at D-dichotoma_M_contig1006:36518..39038- (Dictyota dichotoma ODC1387m male)back to top Coding sequence (CDS) from alignment at D-dichotoma_M_contig1006:36518..39038- >mRNA_D-dichotoma_M_contig1006.140.1 ID=mRNA_D-dichotoma_M_contig1006.140.1|Name=mRNA_D-dichotoma_M_contig1006.140.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=1242bp|location=Sequence derived from alignment at D-dichotoma_M_contig1006:36518..39038- (Dictyota dichotoma ODC1387m male)back to top |