mRNA_D-dichotoma_M_contig1004.131.1 (mRNA) Dictyota dichotoma ODC1387m male
Overview
Homology
BLAST of mRNA_D-dichotoma_M_contig1004.131.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 134 bits (337), Expect = 8.780e-35 Identity = 64/76 (84.21%), Postives = 70/76 (92.11%), Query Frame = 1 Query: 34 FTRSKRVVVQQDGASPHTGKNNPEILHSAGMGRGWIVELVTQPAQSPDLNVNDLGFFASLKSRVWGMNASSIDELV 261 + RSKRVVVQQDGASPHTGK NPEIL+SAG+ RGW+VELVTQPAQSPDLN+NDLG FASLK RVWG+NA SIDELV Sbjct: 289 WLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLKPRVWGVNAFSIDELV 364
BLAST of mRNA_D-dichotoma_M_contig1004.131.1 vs. uniprot
Match: A0A7S3GU94_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GU94_9STRA) HSP 1 Score: 105 bits (261), Expect = 1.600e-25 Identity = 52/150 (34.67%), Postives = 85/150 (56.67%), Query Frame = 1 Query: 34 FTRSKRVVVQQDGASPHTGKNNPEILHSAGMGRGWIVELVTQPAQSPDLNVNDLGFFASLKSRVWGMN--ASSIDELVETIFDQYEKYDGDTLERVWHSLFKVYNQTLRQLGNNDFSVEHTGVTARQRAGTLERVVKYDKEAFTTAWDYL 477 + R++R+ +Q DGA PHT + +H+ GW + +V Q AQSPDLNV DLG F SLK +V + A +IDEL++ + Y++Y DTL+++W + + +R +G+N + H G T ++ + D +A+ A DY+ Sbjct: 9 WMRNRRLKIQHDGARPHTAGGLEDEVHATASTEGWHITMVRQRAQSPDLNVMDLGLFHSLKVQVIQLKDGAHNIDELIQKVRVVYQQYSRDTLDQIWGHQVACWTEIMRAMGSNQYKAPHHGGTVSRKEEGSAVNLSIDADAYNAAVDYV 158
BLAST of mRNA_D-dichotoma_M_contig1004.131.1 vs. uniprot
Match: UPI00053F7236 (uncharacterized protein LOC104908485 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F7236) HSP 1 Score: 98.6 bits (244), Expect = 6.820e-22 Identity = 49/135 (36.30%), Postives = 80/135 (59.26%), Query Frame = 1 Query: 43 SKRVVVQQDGASPHTGKNNPEILHSAGMGRGWIVELVTQPAQSPDLNVNDLGFFASLKSRVWGMNASSIDELVETIFDQYEKYDGDTLERVWHSLFKVYNQTLRQLGNNDFSVEHTGVTARQRAGTLERVVKYDK 447 SK + +QQD A H + N E +A G+ ++L+ QPAQSPDLNV DLGFF ++++ ++ +IDEL+E + D Y+K+D + ++ W L V + L+ G N++ H G +R G L + V++D+ Sbjct: 123 SKEIFIQQDNARAHI-QGNDEAFKAAATQNGFNIKLIQQPAQSPDLNVLDLGFFRAIQALMYQTFPKNIDELIENVQDAYDKFDPNVVKYTWLKLHWVMVEILKVKGGNNYKNPHHGKARLERLGLLPKNVQFDQ 256
BLAST of mRNA_D-dichotoma_M_contig1004.131.1 vs. uniprot
Match: UPI000B7825C5 (uncharacterized protein LOC110701536 n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B7825C5) HSP 1 Score: 97.1 bits (240), Expect = 1.540e-21 Identity = 50/145 (34.48%), Postives = 79/145 (54.48%), Query Frame = 1 Query: 43 SKRVVVQQDGASPHTGKNNPEILHSAGMGRGWIVELVTQPAQSPDLNVNDLGFFASLKSRVWGMNASSIDELVETIFDQYEKYDGDTLERVWHSLFKVYNQTLRQLGNNDFSVEHTGVTARQRAGTLERVVKYDKEAFTTAWDYL 477 SK +++Q D A PH + E L +A G+ ++ V QPAQSPDLNV DLG F +++S + +++DEL+E + + +E +D W +L + L + G N+F+ H G R G LE ++K DK+ +YL Sbjct: 78 SKNIIIQWDNARPHQVPKDEEFL-AATQANGFNIQFVFQPAQSPDLNVLDLGLFKAIQSNQYQSFPTNLDELIEKVDEAFEMFDPTLNRYTWITLQSCMIKVLEKQGGNNFNPPHMGKARLDRQGALEDILKVDKKLVANTVEYL 221
BLAST of mRNA_D-dichotoma_M_contig1004.131.1 vs. uniprot
Match: A0A0N7L738_PLAHL (Predicted methyltransferase n=4 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L738_PLAHL) HSP 1 Score: 99.8 bits (247), Expect = 3.860e-21 Identity = 57/147 (38.78%), Postives = 81/147 (55.10%), Query Frame = 1 Query: 46 KRVVVQQDGASPHTGKNNPEILHSAGMGRGWIVELVTQPAQSPDLNVNDLGFFASLKSRVWGMNASSIDELVETIFDQYEKYDGDTLERVWHSLFKVYNQTLRQLGNNDFSVEHTGV-TARQRAGTLERVVKYDKEAFTTAWDYLAS 483 KRVV+QQD A PH ++PE+ HSA GW ++L QPA SPD N NDLGFFASL+S M A +I++LV + D + K L++V+ +L V +T+ G N + + H T R G L + + A +L+S Sbjct: 604 KRVVLQQDNAKPHVTVDDPEV-HSACSAGGWDMKLTAQPANSPDFNANDLGFFASLQSLQHKMKAKTIEDLVNNVDDAFAKLHYTALDKVFLTLQSVLQETMHIDGCNKYKIPHLAKDTLRTSTGLLPPSLTCSDRVYDKARRFLSS 749
BLAST of mRNA_D-dichotoma_M_contig1004.131.1 vs. uniprot
Match: UPI000B771AE9 (uncharacterized protein LOC110737253 n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B771AE9) HSP 1 Score: 94.0 bits (232), Expect = 2.350e-20 Identity = 53/158 (33.54%), Postives = 83/158 (52.53%), Query Frame = 1 Query: 10 VVKASLSYFTRS--KRVVVQQDGASPHTGKNNPEILHSAGMGRGWIVELVTQPAQSPDLNVNDLGFFASLKSRVWGMNASSIDELVETIFDQYEKYDGDTLERVWHSLFKVYNQTLRQLGNNDFSVEHTGVTARQRAGTLERVVKYDKEAFTTAWDYL 477 V+ A +S + S K V++Q D A PH + E + +A G+ + V QPAQSPDLNV DLG F S++S + ++DELVE + + Y + + + +W +L + + L+ G N + + H + GTL VV +E T A +YL Sbjct: 65 VIPAIISKWPESQPKNVIIQWDNARPHQIPTDDEFI-AATTSNGFNIHFVFQPAQSPDLNVLDLGLFRSIQSLQYQSFPKNVDELVEKVIESYNTFKPEVNKYIWVTLQRCMIKILKAEGGNKYKIPHMNKKKLENLGTLPNVVHVQEEVVTEAVEYL 221
BLAST of mRNA_D-dichotoma_M_contig1004.131.1 vs. uniprot
Match: A0A7S2FC44_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FC44_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 4.620e-20 Identity = 55/123 (44.72%), Postives = 73/123 (59.35%), Query Frame = 1 Query: 58 VQQDGASPHTGKNNPEILHSAGMGRGWIVELVTQPAQSPDLNVNDLGFFASLKSRVWGM-NASSIDELVETIFDQYEKYDGDTLERVWHSLFKVYNQTLRQLGNNDFSVE--HTGVTARQRAG 417 +QQDGA PHT L G G+ +++ TQPAQSPDLNVNDLGFF SLK + A S++E+++ I YE+ D L+R++ SL Y L+ G+NDFS E H G +QR G Sbjct: 34 IQQDGAKPHTAAET--WLKGQGKKEGFDLKVTTQPAQSPDLNVNDLGFFRSLKCAATNVAEAFSVEEMIKYIRQAYEEMPADKLDRMFMSLINNYRLLLKHDGDNDFSQEELHLG---KQRKG 151
BLAST of mRNA_D-dichotoma_M_contig1004.131.1 vs. uniprot
Match: UPI000B778AD2 (uncharacterized protein LOC110722901 n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B778AD2) HSP 1 Score: 92.8 bits (229), Expect = 5.650e-20 Identity = 52/145 (35.86%), Postives = 78/145 (53.79%), Query Frame = 1 Query: 46 KRVVVQQDGASPHTGKNNPEILHSAGMGRGWIVELVTQPAQSPDLNVNDLGFFASLKSRVWGMNASSIDELVETIFDQYEKYDGDTLERVW-HSLFKVYNQTLRQLGNNDFSVEHTGVTARQRAGTLERVVKYDKEAFTTAWDYL 477 K + +QQD A PH ++PE L A G+ + L+ QPAQSPDLNV DLGFF ++++ S++ELVE++ Y YD + W HS++ V + ++ G N+F H G QR G L V+ E + ++L Sbjct: 79 KTIWIQQDNARPHINIDDPEFLEEANKD-GFDMHLICQPAQSPDLNVLDLGFFRAIQAIQHQEFPESVEELVESVLTSYASYDPRIINMTWLHSMY-VMEEIMKVKGGNNFKNPHKGKKRLQRLGLLPSYVEVSNELVLDSINFL 221
BLAST of mRNA_D-dichotoma_M_contig1004.131.1 vs. uniprot
Match: UPI000B8A6B46 (uncharacterized protein LOC110779611 n=1 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8A6B46) HSP 1 Score: 95.5 bits (236), Expect = 1.050e-19 Identity = 52/144 (36.11%), Postives = 75/144 (52.08%), Query Frame = 1 Query: 46 KRVVVQQDGASPHTGKNNPEILHSAGMGRGWIVELVTQPAQSPDLNVNDLGFFASLKSRVWGMNASSIDELVETIFDQYEKYDGDTLERVWHSLFKVYNQTLRQLGNNDFSVEHTGVTARQRAGTLERVVKYDKEAFTTAWDYL 477 K + +QQD A PH N+PE L A G+ + L+ QPAQSPDLNV DLGFF ++S ++ ELV+++ D Y +YD +L W L V + L+Q G N++ H G +R L + + A D+L Sbjct: 407 KTIWIQQDNARPHIFPNDPEFLEEANK-YGFDIHLICQPAQSPDLNVLDLGFFRGIQSLQHQKFPKNVTELVQSVHDAYMEYDPKSLNHTWLQLQYVMVEILKQKGGNNYKSPHQGKKRLERLRLLPTDTQIQQHIIDDAVDFL 549
BLAST of mRNA_D-dichotoma_M_contig1004.131.1 vs. uniprot
Match: A0A484KKG0_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484KKG0_9ASTE) HSP 1 Score: 92.8 bits (229), Expect = 1.050e-19 Identity = 47/149 (31.54%), Postives = 76/149 (51.01%), Query Frame = 1 Query: 46 KRVVVQQDGASPHTGKNNPEILHSAGMGRGWIVELVTQPAQSPDLNVNDLGFFASLKSRVWGMNASSIDELVETIFDQYEKYDGDTLERVWHSLFKVYNQTLRQLGNNDFSVEHTGVTARQRAGTLERVVKYDKEAFTTAWDYLASSPS 492 K +++QQD A PH N+PE + A G+ +EL QP SPDLN+ DLGFFAS++S + ++DELV+ + Y + L VW S + ++ G N++ + H G +R G L ++ + + + L P+ Sbjct: 111 KHIIIQQDNAKPHIDVNDPEFVQVANAD-GYSIELTCQPPNSPDLNILDLGFFASIQSLQHQTSTRNVDELVQHVAQAYANLEAKKLNYVWISYQLAMTEIMKVQGGNNYKLAHIGKARLEREGALPNQLQVSTKLYQASVCALQGVPA 258 The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1004.131.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dichotoma_M_contig1004.131.1 >prot_D-dichotoma_M_contig1004.131.1 ID=prot_D-dichotoma_M_contig1004.131.1|Name=mRNA_D-dichotoma_M_contig1004.131.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=129bp MGRGWIVELVTQPAQSPDLNVNDLGFFASLKSRVWGMNASSIDELVETIFback to top mRNA from alignment at D-dichotoma_M_contig1004:83759..84284+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dichotoma_M_contig1004.131.1 ID=mRNA_D-dichotoma_M_contig1004.131.1|Name=mRNA_D-dichotoma_M_contig1004.131.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=526bp|location=Sequence derived from alignment at D-dichotoma_M_contig1004:83759..84284+ (Dictyota dichotoma ODC1387m male)back to top Coding sequence (CDS) from alignment at D-dichotoma_M_contig1004:83759..84284+ >mRNA_D-dichotoma_M_contig1004.131.1 ID=mRNA_D-dichotoma_M_contig1004.131.1|Name=mRNA_D-dichotoma_M_contig1004.131.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=774bp|location=Sequence derived from alignment at D-dichotoma_M_contig1004:83759..84284+ (Dictyota dichotoma ODC1387m male)back to top |