mRNA_D-herbacea_F_contig104.467.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig104.467.1
Unique NamemRNA_D-herbacea_F_contig104.467.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
[Close]
BLAST of mRNA_D-herbacea_F_contig104.467.1 vs. uniprot
Match: A0A6H5JL27_9PHAE (MPN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JL27_9PHAE)

HSP 1 Score: 693 bits (1789), Expect = 1.120e-247
Identity = 339/363 (93.39%), Postives = 353/363 (97.25%), Query Frame = 1 
Query:   28 MADTGFGGGSAAAPSVEISSSSKDSRDTLYSFDETKLDLIRKTKPWMQDPKYFKKVKISPSAAMKMLMHANSGVEKGMAAGGKPVEIMGMMLGRPDTETPNALIVTDVFPLPVEGAETKVLADDQEVANYMIGLGDLLETTRKERFMGWYHSHPFDVEVHSHCFLSSTDISTQLSWQRAEDPHGNPWLAIVVDPLRSLAKSRPEFGAFRVYPPEFNAPLNEAPDGKIMTDDTQRVELWGSCWNRYYAMEIEYFMSSLASDVMGILTENFLWMRTLGSTPILENENRERFSERIGNVADKVEHCDVHMTHGAGASVSGYLVADPSSVKPKEESALSKTTHGSSELAIEHCQGQMTQITKSIVFG 1116
            MADT +GGG+AAAPSVE S+ SKDSRD+LYSFDE KL+L RKTKPWMQDPKYFKKVKISPSAAMKMLMHANSGVEKGMAAGGKPVEIMGMMLGRPDTETPNALIVTDVFPLPVEGAETKVLADDQEVANYMIGLGDLLETTRKERFMGWYHSHPFDVEVHSHCFLSSTDISTQLSWQRAEDPHGNPWLAIVVDPLRSLAKSRPEFGAFRVYPPEFNAPLNE PDGKI+TDD+QRVELWG+CWNRYY+MEIEYFMSSLASDVMGILTENFLWMRTLGSTPILE+ENRERFSERIGNVADKVEHCDVHM HGAGASVSGY+VAD ++ KPKEESA+SK THGSSELAIEHCQGQMTQITKSIVFG
Sbjct:    1 MADTAYGGGAAAAPSVETSAPSKDSRDSLYSFDEAKLELTRKTKPWMQDPKYFKKVKISPSAAMKMLMHANSGVEKGMAAGGKPVEIMGMMLGRPDTETPNALIVTDVFPLPVEGAETKVLADDQEVANYMIGLGDLLETTRKERFMGWYHSHPFDVEVHSHCFLSSTDISTQLSWQRAEDPHGNPWLAIVVDPLRSLAKSRPEFGAFRVYPPEFNAPLNETPDGKIVTDDSQRVELWGACWNRYYSMEIEYFMSSLASDVMGILTENFLWMRTLGSTPILESENRERFSERIGNVADKVEHCDVHMNHGAGASVSGYVVADSAASKPKEESAISKATHGSSELAIEHCQGQMTQITKSIVFG 363
[Close]
BLAST of mRNA_D-herbacea_F_contig104.467.1 vs. uniprot
Match: A0A836CH01_9STRA (COP9 signalosome complex subunit 5A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH01_9STRA)

HSP 1 Score: 479 bits (1232), Expect = 2.330e-162
Identity = 238/353 (67.42%), Postives = 276/353 (78.19%), Query Frame = 1 
Query:   61 AAPSVEISSSSKDSRDTLYSFDETKLDLIRKTKPWMQDPKYFKKVKISPSAAMKMLMHANSGVEKGMAAGGKPVEIMGMMLGRPDTETPNALIVTDVFPLPVEGAETKVLADDQEVANYMIGLGDLLETTRKERFMGWYHSHPFDVEVHSHCFLSSTDISTQLSWQRAEDPHGNPWLAIVVDPLRSLAKSRPEFGAFRVYPPEFNAPLNEAPDGKIMTDDTQRVELWGSCWNRYYAMEIEYFMSSLASDVMGILTENFLWMRTLGSTPILENENRERFSERIGNVADKVEHCDVHMTHGAGASVSGYLVADPSSVKPKEESALSKTTHGSSELAIEHCQGQMTQITKSIVFGN 1119
            A P+V  SSS     D+LYSFDE  L  +R+ KPW  DPKYFKKVKISPSAAMKMLMHANSGVEKG+  GGKPVEIMG++LGRPD E   +L+VTDVFPLP+EGAET+VLADD EV NYMI LG+ LE+TRKERFMGWYHSHPF+VE HSHCFLSSTD+STQLSWQRAEDPHGNPWLAIVVDPLRSLAK RPEFGAFR YPPE+ AP NE PDGK++ DDTQRVE WG+CW+RY A+E+EYFMSSLAS VMG LTENFLWMR L STP+LE EN+ER  E +  + DK++      T  AG ++    V          +SAL KTT  S++LA+EHC  Q +Q  K+ +FG+
Sbjct:   28 APPAVPASSS-----DSLYSFDEESLRKVREAKPWATDPKYFKKVKISPSAAMKMLMHANSGVEKGIKKGGKPVEIMGLLLGRPDMEA-RSLVVTDVFPLPIEGAETRVLADDAEVTNYMIELGESLESTRKERFMGWYHSHPFEVEAHSHCFLSSTDLSTQLSWQRAEDPHGNPWLAIVVDPLRSLAKGRPEFGAFRAYPPEYAAPPNETPDGKVVMDDTQRVERWGTCWDRYCALEVEYFMSSLASTVMGTLTENFLWMRALSSTPLLERENQERVCESMAVLGDKLKQAGTTFTFRAGHTMDANAVGKAGG--KDSDSALQKTTDMSADLAVEHCIEQSSQAIKAAIFGH 372
[Close]
BLAST of mRNA_D-herbacea_F_contig104.467.1 vs. uniprot
Match: A0A6G0WS84_9STRA (MPN domain-containing protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0WS84_9STRA)

HSP 1 Score: 474 bits (1219), Expect = 4.580e-161
Identity = 232/345 (67.25%), Postives = 277/345 (80.29%), Query Frame = 1 
Query:  100 SRDTLYSFDETKLDLIRKTKPWMQDPKYFKKVKISPSAAMKMLMHANSGVEKGMAA-GGKPVEIMGMMLGRPDTETPN--ALIVTDVFPLPVEGAETKVLADDQEVANYMIGLGDLLETTRKERFMGWYHSHPFDVEVHSHCFLSSTDISTQLSWQRAEDPHGNPWLAIVVDPLRSLAKSRPEFGAFRVYPPEFNAPLNEAPDGKIMTDDTQRVELWGSCWNRYYAMEIEYFMSSLASDVMGILTENFLWMRTLGSTPILENENRERFSERIGNVADKVEHCDVHMTHGAGASVS---GYLVADPSSVKP-KEESALSKTTHGSSELAIEHCQGQMTQITKSIVF 1113
            S D+LY+++E +++ +R  K W QDPKYFK+V++SPSA MKML HA SGVEKGM++ GGKPVEIMG++LGRP T+  N   LIVTD FPLP+EGAETKVLADDQEV NYMI LG+ +ETTRKE+FMGWYHSHPFDVEV SHCFLSSTD+STQL WQR+EDPHGNPWLAIV+DPLRSLAK RPE GAFR YPPEF APLNE PDG+I+TDDT RVE WGSCWNRYYA+EIEYFMS++ S+V+ +L+E FLWMRTL STP+LE ENRERFSERIG +A K+E C+  ++     S     GY V + S      EES L K T  ++EL+IE CQGQ  Q+TK+ +F
Sbjct:   27 SGDSLYTWNEDRVNEVRSNKQWSQDPKYFKRVQVSPSATMKMLSHAQSGVEKGMSSPGGKPVEIMGLLLGRPSTDPANLNCLIVTDAFPLPIEGAETKVLADDQEVMNYMISLGEAIETTRKEKFMGWYHSHPFDVEVTSHCFLSSTDLSTQLQWQRSEDPHGNPWLAIVIDPLRSLAKKRPEMGAFRAYPPEFAAPLNETPDGQIVTDDTARVERWGSCWNRYYALEIEYFMSNMGSNVLSVLSEKFLWMRTLSSTPMLERENRERFSERIGLLATKLEGCESVVSSSKAFSSRMNYGYYVPESSKASSANEESTLDKCTQAANELSIEQCQGQAMQVTKAHLF 371
[Close]
BLAST of mRNA_D-herbacea_F_contig104.467.1 vs. uniprot
Match: A0A1V9YMP0_9STRA (COP9 signalosome complex subunit 5 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YMP0_9STRA)

HSP 1 Score: 473 bits (1218), Expect = 6.040e-161
Identity = 226/345 (65.51%), Postives = 273/345 (79.13%), Query Frame = 1 
Query:  100 SRDTLYSFDETKLDLIRKTKPWMQDPKYFKKVKISPSAAMKMLMHANSGVEKGMAA-GGKPVEIMGMMLGRPDTETPN--ALIVTDVFPLPVEGAETKVLADDQEVANYMIGLGDLLETTRKERFMGWYHSHPFDVEVHSHCFLSSTDISTQLSWQRAEDPHGNPWLAIVVDPLRSLAKSRPEFGAFRVYPPEFNAPLNEAPDGKIMTDDTQRVELWGSCWNRYYAMEIEYFMSSLASDVMGILTENFLWMRTLGSTPILENENRERFSERIGNVADKVEHCDV----HMTHGAGASVSGYLVADPSSVKPKEESALSKTTHGSSELAIEHCQGQMTQITKSIVF 1113
            S D LY+++E +L+ +R  K W QDPKYF++V++SP+A MKML HA SGVEKGM++ GGKPVE+MG++LGRP T+  N   L+VTD FPLPVEGAET+VLADD EV NYMI LG+ +ETTRKE+FMGWYHSHPFDVEV SHCFLSSTD+STQL WQR+EDPHGNPWLAIVVDPLRSLAK RPE GAFR YPPE+  P+NE PDG ++TDDT RVE WGSCWNRYYA+E+EYFMS+L S+V+ +LTE FLWMRTL STP+LE ENRERFSERIG +A K+E C+     H   G+    SGY V D S     E+SAL K    ++EL++EHC GQ  Q+ K ++F
Sbjct:   25 SGDGLYAWNEDRLNEVRANKLWSQDPKYFRRVQVSPAATMKMLSHAQSGVEKGMSSPGGKPVEVMGLLLGRPSTDPANLNTLVVTDAFPLPVEGAETRVLADDAEVINYMISLGEAIETTRKEKFMGWYHSHPFDVEVLSHCFLSSTDLSTQLQWQRSEDPHGNPWLAIVVDPLRSLAKKRPEMGAFRAYPPEYAPPVNETPDGTLVTDDTARVERWGSCWNRYYALEVEYFMSTLGSNVLSVLTEKFLWMRTLSSTPMLERENRERFSERIGALATKLEGCEAAVASHKGFGSARMSSGYYVPDSSKAAAAEDSALDKCAQAAAELSLEHCHGQTLQVAKQMIF 369
[Close]
BLAST of mRNA_D-herbacea_F_contig104.467.1 vs. uniprot
Match: A0A067CCG5_SAPPC (MPN domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CCG5_SAPPC)

HSP 1 Score: 466 bits (1199), Expect = 4.210e-158
Identity = 227/344 (65.99%), Postives = 272/344 (79.07%), Query Frame = 1 
Query:  106 DTLYSFDETKLDLIRKTKPWMQDPKYFKKVKISPSAAMKMLMHANSGVEKGMAA-GGKPVEIMGMMLGRPDTE--TPNALIVTDVFPLPVEGAETKVLADDQEVANYMIGLGDLLETTRKERFMGWYHSHPFDVEVHSHCFLSSTDISTQLSWQRAEDPHGNPWLAIVVDPLRSLAKSRPEFGAFRVYPPEFNAPLNEAPDGKIMTDDTQRVELWGSCWNRYYAMEIEYFMSSLASDVMGILTENFLWMRTLGSTPILENENRERFSERIGNVADKVEHCD--VHMTHGAGAS--VSGYLVADPSSVKPK-EESALSKTTHGSSELAIEHCQGQMTQITKSIVF 1113
            D LYS+ + +L  +R  K W QDPKYF++V++SP+A MKML HA SGVEKGM++ GGKPVEIMG+++GRP T+  +PN L+VTD FPLP+EGAET+VLADD EV NYMI LG+  E TRKE+FMGWYHSHPFDVEV SHCFLSSTD+STQL WQR+EDPHGNPWLAIVVDPLRSLAK RPE GAFR YPPE+  P+NE PDG ++TDDT RVE WGSCWNRYYA+E+EYFMSSL S+V+ +LTE FLWMRTL STP+LE ENRERFSERI  +A K++ C+  V    G G+S   SGY V D S   P  E+SAL K T  ++EL++EHC GQ  Q+ K  +F
Sbjct:   24 DALYSWSDDRLSEVRGNKLWSQDPKYFRRVQVSPAATMKMLSHAQSGVEKGMSSPGGKPVEIMGLLMGRPSTDPSSPNTLVVTDAFPLPIEGAETRVLADDAEVINYMISLGEATEITRKEKFMGWYHSHPFDVEVTSHCFLSSTDLSTQLQWQRSEDPHGNPWLAIVVDPLRSLAKKRPEMGAFRAYPPEYAPPVNETPDGTLVTDDTARVERWGSCWNRYYALEVEYFMSSLGSNVLSVLTEKFLWMRTLSSTPMLERENRERFSERIALLATKLDGCESMVSSQRGFGSSRMSSGYYVPDSSKAAPATEDSALDKCTQAANELSMEHCHGQTLQVAKQKLF 367
[Close]
BLAST of mRNA_D-herbacea_F_contig104.467.1 vs. uniprot
Match: A0A1W0A9N7_9STRA (COP9 signalosome complex subunit 5 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9N7_9STRA)

HSP 1 Score: 459 bits (1181), Expect = 2.000e-155
Identity = 225/344 (65.41%), Postives = 272/344 (79.07%), Query Frame = 1 
Query:  106 DTLYSFDETKLDLIRKTKPWMQDPKYFKKVKISPSAAMKMLMHANSGVEKGMAA-GGKPVEIMGMMLGRPDTETPN--ALIVTDVFPLPVEGAETKVLADDQEVANYMIGLGDLLETTRKERFMGWYHSHPFDVEVHSHCFLSSTDISTQLSWQRAEDPHGNPWLAIVVDPLRSLAKSRPEFGAFRVYPPEFNAPLNEAPDGKIMTDDTQRVELWGSCWNRYYAMEIEYFMSSLASDVMGILTENFLWMRTLGSTPILENENRERFSERIGNVADKVEHCDVHMTH----GAGASVSGYLVADPS-SVKPKEESALSKTTHGSSELAIEHCQGQMTQITKSIVF 1113
            D LY ++E +L+ +R  K W QDPKYF++V++SPSA MKML HA SGVEKGM++ GGKPVE+MG+++GRP T+  N   LIVTD FPLPVEGAET+VLADD EV NYMI LG+ +ETTRKE+FMGWYHSHPFDVEV SHCFLSSTD+STQL WQR+EDPHGNPWLAIV+DPLRSLAK RPE GAFR YPPE+  P+NE PDG+  TD T RVE WGSCWNRYYA+EI+YFMSSL S+V+ +L+E FLWMRTL STP+LE ENRERFS+RIG +A+K+  C+  ++     G+    SGY V D S +    EESAL K T  ++EL+IEHCQGQ  Q+ K  +F
Sbjct:   23 DGLYLWNEERLNEVRANKLWTQDPKYFRRVQVSPSATMKMLSHAQSGVEKGMSSPGGKPVEVMGLLIGRPSTDPNNLNTLIVTDAFPLPVEGAETRVLADDAEVINYMISLGEAIETTRKEKFMGWYHSHPFDVEVTSHCFLSSTDLSTQLQWQRSEDPHGNPWLAIVIDPLRSLAKKRPEMGAFRAYPPEYAPPVNETPDGQ--TDSTARVERWGSCWNRYYALEIQYFMSSLGSNVLSVLSEKFLWMRTLSSTPMLERENRERFSDRIGLLANKLHGCETLISSQKNFGSARMSSGYYVPDTSKTTSSTEESALDKCTQAANELSIEHCQGQALQVAKQTIF 364
[Close]
BLAST of mRNA_D-herbacea_F_contig104.467.1 vs. uniprot
Match: W4GHR5_9STRA (MPN domain-containing protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GHR5_9STRA)

HSP 1 Score: 458 bits (1178), Expect = 1.570e-154
Identity = 228/364 (62.64%), Postives = 276/364 (75.82%), Query Frame = 1 
Query:  100 SRDTLYSFDETKLDLIRKTKPWMQDPKYFKKVKISPSAAMKMLMHANSGVEKGMAA-GGKPVEIMGMMLGRPDTETPN--ALIVTDVFPLPVEGAETKVLADDQEVANYMIGLGDLLETTRKERFMGWYHSHPFDVEVHSHCFLSSTDISTQLSWQRAEDPHGNPWLAIVVDPLRSLAKSRPEFGAFRVYPPEFNAPLNEAPDGKIMTDDTQRVELWGSCWNRY------------------YAMEIEYFMSSLASDVMGILTENFLWMRTLGSTPILENENRERFSERIGNVADKVEHCDVHMTHGAGASVS---GYLVADP--SSVKPKEESALSKTTHGSSELAIEHCQGQMTQITKSIVF 1113
            S D+LY+++E +++ +R  K W  DPKYF++V++SPSA MKML HA SGVEKGM++ GGKPVEIMG++LGRP T+  N   LIVTD FPLP+EGAETKVLADDQEV NYMI LG+ +ETTRKE+FMGWYHSHPFDVEV SHCFLSSTD+STQL WQR+EDPHGNPWLAIV+DPLRSLAK RPE GAFR YPPEF AP+NE PDG+I+TDDT RVE WGSCWNRY                  YA+EIEYFMS+L ++V+G+L+E FLWMRTL STP LE ENRERFSERIG +A K++ C+  + +  G S     GY V D   ++    E+SAL K T  ++EL+IE   GQ  Q+ K I+F
Sbjct:   30 SGDSLYTWNEDRVNEVRSNKQWSHDPKYFRRVQVSPSATMKMLSHAQSGVEKGMSSPGGKPVEIMGLLLGRPSTDPANLNTLIVTDAFPLPIEGAETKVLADDQEVMNYMISLGEAIETTRKEKFMGWYHSHPFDVEVTSHCFLSSTDLSTQLQWQRSEDPHGNPWLAIVIDPLRSLAKKRPEMGAFRAYPPEFAAPVNETPDGQIVTDDTARVERWGSCWNRYCTQVLVGDDSTRLFVIRYYALEIEYFMSTLGANVLGVLSEKFLWMRTLSSTPTLERENRERFSERIGGLATKLDGCEASVGNAKGYSSRMNFGYYVPDTLKTAAASNEDSALDKCTQAANELSIEQLHGQTMQVAKQILF 393
[Close]
BLAST of mRNA_D-herbacea_F_contig104.467.1 vs. uniprot
Match: K3WPU1_GLOUD (MPN domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WPU1_GLOUD)

HSP 1 Score: 456 bits (1172), Expect = 6.290e-154
Identity = 230/370 (62.16%), Postives = 271/370 (73.24%), Query Frame = 1 
Query:   34 DTGFGGGSAAAPSVEISSSSKDSRDTLYSFDETKLDLIRKTKPWMQDPKYFKKVKISPSAAMKMLMHANSGVEKGMAAGGKPVEIMGMMLGRPDTETPN------ALIVTDVFPLPVEGAETKVLADDQEVANYMIGLGDLLETTRKERFMGWYHSHPFDVEVHSHCFLSSTDISTQLSWQRAEDPHGNPWLAIVVDPLRSLAKSRPEFGAFRVYPPEFNAPLNEAPDGKIMTDDTQRVELWGSCWNRYYAMEIEYFMSSLASDVMGILTENFLWMRTLGSTPILENENRERFSERIGNVADKVEHCDVHMTHGAGAS--VSGYLVADPSSVKPKEESALSKTTHGSSELAIEHCQGQMTQITKSIVFGN 1119
            D+G    + AAPS+E         D  Y FDE  L  +R  K WMQDPKYFKKV ISPSA MKM+ HANSGVEKG+  GGKPVEIMG++LGRP T T         LIVTD FPLP+EGAET+VLADD EV NYMI LG+ +E TRKE+FMGWYHSHPFDVEVHSHCFLS+TD+STQL WQR+EDPHGNPWLAIV+DPLRSLAK RPE GAFRVYPPEF AP+NE PDG I+TD+T R+E WGSCWNRYY +EI+YFMSSL S V+ IL+E FLWMRTL S  + E ENR+RFSERI  +A+K++ C+  +    G S  +  Y V +    K  E+S L K T  ++EL+IEH  GQ  QI K  +F +
Sbjct:   13 DSGAASAATAAPSME---------DAAYGFDEDVLKEVRNNKVWMQDPKYFKKVIISPSATMKMMNHANSGVEKGIKNGGKPVEIMGLILGRPATGTERDAGDAQTLIVTDCFPLPIEGAETRVLADDAEVINYMISLGEAIEQTRKEKFMGWYHSHPFDVEVHSHCFLSATDVSTQLQWQRSEDPHGNPWLAIVLDPLRSLAKKRPEMGAFRVYPPEFVAPVNETPDGTIITDETTRMERWGSCWNRYYTLEIDYFMSSLGSQVVSILSEEFLWMRTLSSNTMQERENRDRFSERIQLLANKLDGCETMLAPRGGRSSRIGEYFVPEKQP-KDSEDSVLDKITQAANELSIEHSHGQELQIAKKALFND 372
[Close]
BLAST of mRNA_D-herbacea_F_contig104.467.1 vs. uniprot
Match: A0A8K1FRA5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FRA5_PYTOL)

HSP 1 Score: 454 bits (1169), Expect = 1.170e-153
Identity = 221/345 (64.06%), Postives = 264/345 (76.52%), Query Frame = 1 
Query:  106 DTLYSFDETKLDLIRKTKPWMQDPKYFKKVKISPSAAMKMLMHANSGVEKGMAAGGKPVEIMGMMLGRPDTETPN------ALIVTDVFPLPVEGAETKVLADDQEVANYMIGLGDLLETTRKERFMGWYHSHPFDVEVHSHCFLSSTDISTQLSWQRAEDPHGNPWLAIVVDPLRSLAKSRPEFGAFRVYPPEFNAPLNEAPDGKIMTDDTQRVELWGSCWNRYYAMEIEYFMSSLASDVMGILTENFLWMRTLGSTPILENENRERFSERIGNVADKVEHCDVHMT-HGAGASVSGYLVADPSSVKPKEESALSKTTHGSSELAIEHCQGQMTQITKSIVFGN 1119
            D  Y  DE  L  +R  K WMQDPKYFKKV +SPSAAMKM+ HA+SGVEKG+  GGKPVEIMG+MLGRP T T         LIVTD FPLP+EGAET+VLADD EV NYMI LG+ +E TRKERFMGWYHSHPFDVEVHSHCFLS+TD+STQL WQR+EDP+GNPWLA+V+DPLRSLAK RPE GAFRVYPPE+ AP+NE PDG I+TD+T R+E WGSCWNRYY +E++YFMSSL S ++ IL+E FLWMRTL S  + E ENR+RFSERI  +A+K++ C+ H+   G  A +  Y V +  + K  EESAL K T  ++ELAIEH  GQ  Q+ K  +F +
Sbjct:   17 DAAYGVDEEVLKDVRANKVWMQDPKYFKKVIVSPSAAMKMMNHAHSGVEKGIKNGGKPVEIMGLMLGRPSTGTDRDVGDAQTLIVTDCFPLPIEGAETRVLADDAEVINYMISLGEAVEQTRKERFMGWYHSHPFDVEVHSHCFLSATDVSTQLQWQRSEDPNGNPWLAVVLDPLRSLAKKRPEMGAFRVYPPEYTAPVNETPDGTIVTDETTRMERWGSCWNRYYTLEVDYFMSSLGSQIVNILSEEFLWMRTLSSNTMQERENRDRFSERIQLLANKLDGCESHLAPRGRNARIGDYYVPEKQN-KESEESALDKITQAANELAIEHSHGQELQLAKKALFND 360
[Close]
BLAST of mRNA_D-herbacea_F_contig104.467.1 vs. uniprot
Match: A0A3R6WPI2_9STRA (MPN domain-containing protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A3R6WPI2_9STRA)

HSP 1 Score: 456 bits (1174), Expect = 1.220e-153
Identity = 229/363 (63.09%), Postives = 275/363 (75.76%), Query Frame = 1 
Query:  100 SRDTLYSFDETKLDLIRKTKPWMQDPKYFKKVKISPSAAMKMLMHANSGVEKGMAA-GGKPVEIMGMMLGRPDTETPN--ALIVTDVFPLPVEGAETKVLADDQEVANYMIGLGDLLETTRKERFMGWYHSHPFDVEVHSHCFLSSTDISTQLSWQRAEDPHGNPWLAIVVDPLRSLAKSRPEFGAFRVYPPEFNAPLNEAPDGKIMTDDTQRVELWGSCWNR---------------YYAMEIEYFMSSLASDVMGILTENFLWMRTLGSTPILENENRERFSERIGNVADKVEHCDVHMTHGAGASVS---GYLVADPSSVKPK----EESALSKTTHGSSELAIEHCQGQMTQITKSIVF 1113
            S D LY+++E +++ IR  K W QDPKYF++V++SPSA MKML HA SGVEKGM++ GGKPVE+MG++LGRP T+  N   LIVTD FPLP+EGAETKVLADDQEV NYMI LG+ +ETTRKE+FMGWYHSHPFDVEV SHCFLSSTD+STQL WQR+EDPHGNPWLAIV+DPLRSLAK RPE GAFR YPPEF AP+NE PDG+I+TDDT RVE WGSCWNR               YYA+EIEYFMS+L ++V+G+L+E FLWMRTL STP LE ENRERFSERI  +A K++ CD  ++H          GY V  P ++KP     EESAL K T  +++L+IE   GQ  Q+ K  +F
Sbjct:   52 SGDNLYAWNEDRVNEIRTNKQWSQDPKYFRRVQVSPSATMKMLSHAQSGVEKGMSSPGGKPVEVMGLLLGRPSTDPANLNTLIVTDAFPLPIEGAETKVLADDQEVMNYMITLGEAIETTRKEKFMGWYHSHPFDVEVTSHCFLSSTDLSTQLQWQRSEDPHGNPWLAIVIDPLRSLAKKRPEMGAFRAYPPEFAAPVNETPDGQIVTDDTARVERWGSCWNRFAWPSVDRSHGHQRRYYALEIEYFMSTLGANVLGVLSEKFLWMRTLSSTPTLERENRERFSERIVGLATKLDGCDASVSHTKSYPSRMNLGYYV--PDAIKPSAAANEESALDKCTQAANDLSIEQLHGQSLQVAKQFLF 412
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig104.467.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JL27_9PHAE1.120e-24793.39MPN domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CH01_9STRA2.330e-16267.42COP9 signalosome complex subunit 5A n=1 Tax=Tribon... [more]
A0A6G0WS84_9STRA4.580e-16167.25MPN domain-containing protein n=2 Tax=Aphanomyces ... [more]
A0A1V9YMP0_9STRA6.040e-16165.51COP9 signalosome complex subunit 5 n=1 Tax=Achlya ... [more]
A0A067CCG5_SAPPC4.210e-15865.99MPN domain-containing protein n=2 Tax=Saprolegnia ... [more]
A0A1W0A9N7_9STRA2.000e-15565.41COP9 signalosome complex subunit 5 n=1 Tax=Thraust... [more]
W4GHR5_9STRA1.570e-15462.64MPN domain-containing protein n=8 Tax=Aphanomyces ... [more]
K3WPU1_GLOUD6.290e-15462.16MPN domain-containing protein n=2 Tax=Pythiaceae T... [more]
A0A8K1FRA5_PYTOL1.170e-15364.06Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3R6WPI2_9STRA1.220e-15363.09MPN domain-containing protein n=3 Tax=Aphanomyces ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig104contigD-herbacea_F_contig104:316782..323776 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score693.0
Seed ortholog evalue7.7e-197
Seed eggNOG ortholog2880.D7G460
Preferred nameRRI1
KEGG koko:K09613
Hectar predicted targeting categoryother localisation
GOsGO:0000338,GO:0000749,GO:0000754,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008180,GO:0008233,GO:0008234,GO:0008237,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009987,GO:0010033,GO:0010646,GO:0010893,GO:0016787,GO:0019216,GO:0019218,GO:0019222,GO:0019236,GO:0019538,GO:0019783,GO:0019784,GO:0023051,GO:0023058,GO:0031136,GO:0031137,GO:0031139,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032443,GO:0032991,GO:0036211,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043900,GO:0043902,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045834,GO:0045940,GO:0046889,GO:0046890,GO:0046999,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050794,GO:0050810,GO:0050896,GO:0051716,GO:0062012,GO:0062013,GO:0065007,GO:0070011,GO:0070452,GO:0070646,GO:0070647,GO:0070887,GO:0071310,GO:0071444,GO:0071704,GO:0080090,GO:0106118,GO:0106120,GO:0140096,GO:1901564,GO:1902930,GO:1902932,GO:2000241,GO:2000243
EggNOG free text desc.protein deneddylation
EggNOG OGsCOG1310@1,KOG1554@2759
Ec32 ortholog descriptionCOP9 signalosome complex subunit 5a
Ec32 orthologEc-02_001400.1
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko04121
Exons9
Model size1788
Cds size1101
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927450.373546-UTR-D-herbacea_F_contig104:316781..3174411622927450.373546-UTR-D-herbacea_F_contig104:316781..317441Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig104 316782..317441 -
1690790177.5766082-UTR-D-herbacea_F_contig104:316781..3174411690790177.5766082-UTR-D-herbacea_F_contig104:316781..317441Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig104 316782..317441 -
1622927450.5495374-UTR-D-herbacea_F_contig104:323749..3237761622927450.5495374-UTR-D-herbacea_F_contig104:323749..323776Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig104 323750..323776 -
1690790177.7084496-UTR-D-herbacea_F_contig104:323749..3237761690790177.7084496-UTR-D-herbacea_F_contig104:323749..323776Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig104 323750..323776 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927450.3833842-CDS-D-herbacea_F_contig104:317441..3175201622927450.3833842-CDS-D-herbacea_F_contig104:317441..317520Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig104 317442..317520 -
1690790177.5900254-CDS-D-herbacea_F_contig104:317441..3175201690790177.5900254-CDS-D-herbacea_F_contig104:317441..317520Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig104 317442..317520 -
1622927450.393819-CDS-D-herbacea_F_contig104:317989..3181591622927450.393819-CDS-D-herbacea_F_contig104:317989..318159Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig104 317990..318159 -
1690790177.6106775-CDS-D-herbacea_F_contig104:317989..3181591690790177.6106775-CDS-D-herbacea_F_contig104:317989..318159Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig104 317990..318159 -
1622927450.4052353-CDS-D-herbacea_F_contig104:318558..3186791622927450.4052353-CDS-D-herbacea_F_contig104:318558..318679Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig104 318559..318679 -
1690790177.6206346-CDS-D-herbacea_F_contig104:318558..3186791690790177.6206346-CDS-D-herbacea_F_contig104:318558..318679Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig104 318559..318679 -
1622927450.4158108-CDS-D-herbacea_F_contig104:319215..3193731622927450.4158108-CDS-D-herbacea_F_contig104:319215..319373Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig104 319216..319373 -
1690790177.6307077-CDS-D-herbacea_F_contig104:319215..3193731690790177.6307077-CDS-D-herbacea_F_contig104:319215..319373Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig104 319216..319373 -
1622927450.4284325-CDS-D-herbacea_F_contig104:320430..3205831622927450.4284325-CDS-D-herbacea_F_contig104:320430..320583Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig104 320431..320583 -
1690790177.6451287-CDS-D-herbacea_F_contig104:320430..3205831690790177.6451287-CDS-D-herbacea_F_contig104:320430..320583Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig104 320431..320583 -
1622927450.5037396-CDS-D-herbacea_F_contig104:321108..3212071622927450.5037396-CDS-D-herbacea_F_contig104:321108..321207Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig104 321109..321207 -
1690790177.6562092-CDS-D-herbacea_F_contig104:321108..3212071690790177.6562092-CDS-D-herbacea_F_contig104:321108..321207Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig104 321109..321207 -
1622927450.5147393-CDS-D-herbacea_F_contig104:321666..3217891622927450.5147393-CDS-D-herbacea_F_contig104:321666..321789Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig104 321667..321789 -
1690790177.6658034-CDS-D-herbacea_F_contig104:321666..3217891690790177.6658034-CDS-D-herbacea_F_contig104:321666..321789Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig104 321667..321789 -
1622927450.5283608-CDS-D-herbacea_F_contig104:322556..3226081622927450.5283608-CDS-D-herbacea_F_contig104:322556..322608Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig104 322557..322608 -
1690790177.681998-CDS-D-herbacea_F_contig104:322556..3226081690790177.681998-CDS-D-herbacea_F_contig104:322556..322608Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig104 322557..322608 -
1622927450.5396874-CDS-D-herbacea_F_contig104:323603..3237491622927450.5396874-CDS-D-herbacea_F_contig104:323603..323749Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig104 323604..323749 -
1690790177.6918952-CDS-D-herbacea_F_contig104:323603..3237491690790177.6918952-CDS-D-herbacea_F_contig104:323603..323749Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig104 323604..323749 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig104.467.1prot_D-herbacea_F_contig104.467.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig104 317442..323749 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig104.467.1

>prot_D-herbacea_F_contig104.467.1 ID=prot_D-herbacea_F_contig104.467.1|Name=mRNA_D-herbacea_F_contig104.467.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=367bp
MADTGFGGGSAAAPSVEISSSSKDSRDTLYSFDETKLDLIRKTKPWMQDP
KYFKKVKISPSAAMKMLMHANSGVEKGMAAGGKPVEIMGMMLGRPDTETP
NALIVTDVFPLPVEGAETKVLADDQEVANYMIGLGDLLETTRKERFMGWY
HSHPFDVEVHSHCFLSSTDISTQLSWQRAEDPHGNPWLAIVVDPLRSLAK
SRPEFGAFRVYPPEFNAPLNEAPDGKIMTDDTQRVELWGSCWNRYYAMEI
EYFMSSLASDVMGILTENFLWMRTLGSTPILENENRERFSERIGNVADKV
EHCDVHMTHGAGASVSGYLVADPSSVKPKEESALSKTTHGSSELAIEHCQ
GQMTQITKSIVFGNIK*
back to top

mRNA from alignment at D-herbacea_F_contig104:316782..323776-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig104.467.1 ID=mRNA_D-herbacea_F_contig104.467.1|Name=mRNA_D-herbacea_F_contig104.467.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=6995bp|location=Sequence derived from alignment at D-herbacea_F_contig104:316782..323776- (Desmarestia herbacea DmunF female)
CTCCGACGTTTGTTCCTCTGGGTTAGCATGGCTGACACGGGTTTTGGAGG
CGGGTCGGCGGCTGCCCCCTCAGTTGAGATCTCGAGTTCCTCGAAGGACT
CTCGGGACACGTTATACAGCTTCGATGAAACCAAGCTAGATCTCATCCGC
AAGACGAAGCCATGGATGCAAGAGTGAGATACTTTCCGCTTTGCTGAGCA
GGACGGCATACTGTACTGCATTGCGACTGCCCTCGCTAGTTACGGTTGTG
GCGGCAGCTGTATCAGGATGAGTGTTGATGTGGATTGCCGATTGCAACTG
ATGATGCTGTTGGAGCAGTTGGAATTGAGGGCAACTGAGTGAAGTTACGT
ATGGGACTGTTTTGAAATGTCAAATATATGGCAACACATCAACACTACGA
GTACGAGTACAGACAGTAGTATCATACTCTACTCTGGTGTACAGCGCGGT
ATCACAGCAGGAATTTGCACGAGGATACAGAACATGGCTTTGGTGATAGG
ATTTACTGTAGAATACCTTTGATTATGTCTTGTTTGCGACAAAGTGCCAT
AGAGGCATACACAGCACGCGAAGGGTTTCGCCTTTCTCGCCTCCTTGGGT
TGCTGTGGCATTTTGGTATTAATGGTGGGTGATTGCCGTGCGCTGCAAGG
CCAAAAGTATGACTATACCTGAGTACAACTACTGTACACTAATACTTCGA
GTACGAGCTTTAGAGCTACTATCATATCGAGTAGAGGTCTATTGTTGTCA
GTCTTTCAGAAAGATGCCGCAACATGCAGCGCATAACGCCGTTCAAGAGG
CGTAACATTTGCGCAACTGCATCACCATACCACGAACCGTGGCGAATATT
GTGATATGTATCGGCGTGAGCTGGAGAAGCTCGAGCACGCACAGCAGACA
AACAGACAAGCCGTCGACCATAAAATTCGCATTTGCCGCACTACAACAAC
AACAGTAGTTGTTCTCTGTTCATGTCATGACATCATACCAGGTATGACAA
GACTGAAGGAGCCCGAACAGTATTTGTTGTCTTGCACGCACCATGCGGTG
AATGGAGCTCTCGGCAGTTGAAAGGAAGCGTAAACTACTATGATACGTAT
GACATTACTTTCTGTTATACTGAGTACGCTCGTTGCCCCGGCCCCATGCC
CCATGCCGCACTTTCCAGCCCCAAGTACTTCAAGAAAGTCAAGATTTCGC
CATCGGCAGCTATGAAGATGGTGAGTTTTGAGCGTGACTGCAGCCGTAAG
TCGTACAGTATGATACGAAGTATGATACGAAGTACGATAGTATTACAACC
AAGGTACGGAGTACAACAGTAGTGAACAATACGGAGATGACAGTAGTCCT
CCGAGAATCCTCTAGAACCAGTTCGCCAGCGCAGACAACGGTATGTTCGT
GGCGGAGATATATTTTCGTCTGTTGGGCTCTCTGTGCCTCACTATTCTGG
TGCGGTTGCCTGAAATGTGGCCTATCCTGGCCGCGTCAGTTGTTTTTGAC
GGTAGCATGGCTTTTGCCTGTTTTGGGAGTACCCCAGCACCTTAGCCCAG
GTGCCATAATGACGCTCTTCGTAGGGCATCGATGGTGCGACACAACGAAC
GCTGACCGCGCAACCGACTTCCTCGAAACTACTCACTCGGTATACGCCAT
AATTGCTGCGGTCATCCGTGCCGGACACCCGCGGGACGCCCGCTTCCATT
TTTCCCATTACTCCTTGTTGGTATACTTCGAAGTACAGTAGTATTGTATG
TAGTTTCTTAGGGGTGGTGCTCTCGGTCTGGCTTTCTCTCCCGTTGATTT
TCCAGTATTTTGTTTAGCCTGTGACAACAAACCCGTAGTTGGATATGCCA
ATCGGTTAGCGATACGCAAAAATTCAAGTATTGAAATATGCCAGTCACTG
AGTTCGTCTTATTTTTCTAACCTGCTTGTGGCGTGCTCTCGTGTCGTTGT
CTTGAATCTGGCATCACGTCTGGTGCGGTACGTGCAGCTGATGCATGCCA
ACTCTGGGGTCGAGAAGGGCATGGCTGCCGGAGGAAAGCCTGTGGAGATA
ATGGGCATGATGTTGGGGAGGCCTGACACGGAGACGCCGAACGCTTTGAT
CGTCACAGATGTGAACTTCTAGGGTACTCTAGTATTGGATTGGTTTGCTA
GGTTTAGACCAAGCCTGTGTGTGCCACCCACCCCGGCTCTTGTGAGCCAA
GCCTACTGTGCTGTACCCCAATGCAACGGCGTGGTGGGCACGTGGGCCTG
TGTAACTGTTGTAACCTTGACGGGGGGCGCACACTTAGATACCAGCGCTT
GTTTGCGCTGCCCCATGCGGTACGAGCTGCTTGGGATATCAGTATTGCCA
TCCTCGAGAACGTGCAACAGTATTTTACTCCGGAGTATGACCTCATACCT
TGTTCAGGCTACTGAGATGGCGTTGCTCTTCATACTTTGTGCTTTGACCC
ATCGCCCAACATTTTGGCGCCCCACCTGCCCCATAGTTATTCCGGCAGGT
TGTTTTGTCAAGGTGCCATCGCTAACGCTGTCCCATTTCTCCCACCTGTC
ACCTCTGGTGTCGATACAGGTGTTCCCACTGCCAGTTGAAGGGGCGGAGA
CCAAAGTGCTGGCTGATGATCAAGAGGTGGCGAATTACATGATCGGCCTT
GGGGATTTGCTCGAGACGGTAATATACGGCGCGTGGGTGTTCGTCTGCGT
CCAATGCCGGTAGTGTTGCGACGGCTCTGCAGCTTTGGACATTCTTATCT
TAGAAATAGCGTGCGTTAGACTTGTTCATCGATGCGGGACTCGCTAGCCA
CGGGAGCTATTGTGCTCCTAGCCATCTCGTAACAGGCAGAACCCCCCGGC
TGTCGATGTAATGGAGACGATGTGTGGGCCGATTTTTTGGCGTACTAGAG
CCTGATGTCGTGTAGTTTTCGTGGACGTCCGCCGCCTATGATATTTTTCG
TCGCCGCATCATGCCAAGGCTTTAACGTACCCGCGCCCGCTGAAAGGACC
GCCTAAGAGATATGGTGCGCTTCTATTCTGATGTAGGTTGTTTCGGTTGT
ATCGCCATTTGCAGCGTCGTTACCCGTCGCTCTTCTTCGTCATACTAGTA
GCGTATTATAGGCCTCGAGCACTTATGCTCATTTCCTATTTTCGTTCGTC
GATGACACTGTTAACATTGCATTTTCCGCCCGACCCGCGACAGACGCGGA
AGGAGCGATTCATGGGGTGGTATCATAGCCACCCGTTCGATGTCGAGGTG
CACAGCCACTGCTTCCTCTCGTCCACGGACATCTCGACTCAGCTGTCTTG
GCAGCGAGCAGAGGACCCTCACGGCAACCCCTGGCTGGCCATTGTGGTAG
GCTACTCTCTGCGTTTGTGTGTAGAAATTGTTAAAAGTGTGTGCTTTGCA
AGTGTTATATGACAGAGCTGCACACAGCAGTACGTAAGAGTGCAGAGTAG
TAGTTAGAGACTATATGTAGCCGTTTCATGCGAACCGTAACTTATGATTT
CCAGAATCGGTGTTGTTCTGGAAGAGTATATACAAAAGGAGAACGATCTA
ACGATTGATGCGCAATTGCGTAAGATGCAAGATGTAGATACGAGTCGAGT
CTAGAAGAGGAACACGAGAGGGCTCGTAGAGTATACAAGGGCCCCCACCC
CGCTCACTTTTTGTCTACACCGGGAGTTGCCAATCAAGAGTAAGCAGGCA
TTAACAGTACTTGTTCTAGTTAATACATCAATATCATCTTCTTGTGAGAC
GTGACGTGCAGCAGCGTGAGAGTATCACGGACTGCCTGCAAAGGAAAAGT
AAACGTCATCCGTTGGACCAGCTATTATCTTGGACAATACCGACAGAAAT
TACCACCGCTTGCTTTGCCGTGTACGGTAGTAGGTCGTAAAGACTACTCA
GGACATTTTTCATGTTGAAGTTATTTTGAATCGATGTGTACTGGTCGTAT
AGCATGGTGCTGCCCTTTTGGCGTCGTCTCAGATTCAAGAAATAGACGTC
TTGTATGGCGGTTGTCCGTTTGCATGTGCTAGCGATCCCGAGTCAAACTG
CCACAAGCATCATGAGGTCCACCTGTCGAGTGCATTAAGCACTTCCCGCA
AATCTTTTGTTCATAAATAGAGTGCGAGCTACCTTGGCGTCACTTTTTGC
CCCAAGACAAGAAAAACGAACAACAATCGAAAATAGTTAGTTGCACTTTG
TGTCGTCTATTTTATATTTGGGAGATTCTCGGGAATTGCAAGGTTGCCCC
AACCGAGTGCTGTTCTATGTGTCAGTATACCGCACGTTGTGGGTGTAGTT
ATCGCTGTGGTACAGACCAACGGCCGTAGATTTACTGTACATCACGCTGG
TACTGATATGTTCAGAAGAATAACCACACTGCGCTGCACCGTCCTCTCCT
CAGGTGGATCCCTTGCGTTCGTTGGCCAAGTCTCGCCCGGAGTTCGGTGC
GTTTCGGGTGTACCCTCCTGAGTTCAACGCCCCTCTGAACGAAGCGCCTG
ATGGCAAGATCATGACCGATGACACGCAGAGGGTGGAGCTGTGGGGATCT
TGCTGGAATCGGTGAGGGTCCGTGCCTGTACCCCCGTGCGGTTGCATAGC
CCGGGCACGTGAAGCTTGTCGGTTTATTTATGTCCTGACAAATCCCGCCG
AATTGGGTACCACGTAACCCTTTAGTGCGATGTACCGTTTCCCCTGTAGT
AAGATGGTATGGTTATTACAGAAGACGGGGATGATGCAGTACACCCTCGG
GTCTCGATGTTTCATGTTGCCACCAACAGCTTACGTTAGACACTTGTTGC
CGGCGAAATAGTATGCTGCATCGTTAAGTAGAGCCTGTCGATCACAAGGA
GACTCCTCTGTTTGGGAAGAGGTTCAGTTCCGCGAGTTGCTAGTTCTTAA
CGTACGCTGTACGGCAGTCCTTTAAATCGACCGGGCGACGAGAATTGCCA
CCCATTTTTCGCCGAATGACTTACACACTTGCTTATAACATGCCAGGTAC
CTGGTACGTTGGCTTGGTATGAAGCGATTATGTGAGTGTTGCGTCCGTGC
GATTTGGATTCCTGATGAGGTGCGCTATGCCCTTTTCTTATGTGTAGGTA
TTATGCCATGGAGATCGAATACTTCATGAGCTCCCTGGCATCCGACGTGA
TGGGTATCCTCACGGAGAACTTCCTGTGGATGCGTACGCTAGGCTCGACC
CCTATCCTCGAGAACGAGGTGACTCGGCATCGGCGCGCGTGTTGTGTCGC
TTTTAATGTCGCACGGTCTATTATCGCATGATCTAGTGACTCACCATTGA
GCCGTAAACCCAGAGAAAACATGGCACGCTGTGGGGAGCCTTGGCCCCCG
ACAACCGTCACACGAACGGGCCACCCGCGTACAATTGGTGACGCCCTTTG
CTTTTGCTGCTTTCGTACTCTTGAACGACTATTCGTCGAATTGTTTTATG
ATTCATCGTTGCGGTTGCTGTCGTACGCGCACAAGACTCGACAATTTGCA
GGTATGTACCTACAGTTCCCCACTACTCGTACTACATTTTGACGCGTGGA
ATATATCCTCAAAATGTTTTCTGCGCCCATGATCAACGTTTTGATTGCGT
GCAATACGCCCCAACAGAACCGGGAACGCTTCTCTGAGCGCATTGGCAAC
GTGGCAGACAAGGTGGAGCACTGCGATGTACACATGACCCATGGGGCAGG
CGCGAGCGTGAGCGGCTACTTGGTAGCGGACCCGTCGAGCGTCAAGCCAA
AGGAGGAATCAGCGCTATCCAAGACAACGCACGGCAGGTAGATAAACAAG
CACGCATATTCATTGTGCGGGCCACGCACCACGGGCCAGTAGTCTTGAGT
CTTGATTGTCTTAATAAGCTGTATCGTTTGGGTTACCAATGTGGGCGCTA
GAGCCTGCCTTTTTGCTGGGAATGATTGCCGCTGGCGTGCTGCGTGTGTG
AGGTTTTCCCTGCCCAACGTTTGTCAATTTCACAAAAAAAAAGGCATCCA
CGCGGCGTTGAGACATAAAAGAACTGCGAGATGCAGTCTACATACACCAT
TTACTCCGGAGTAAGTAGTGCTTCCAGCATGCGTCATATTCTTGGAGGGT
GACGACGTCCCCGGTTCAGCCTGAACTGTCGCCGATCTCGTTGGCGGAAT
ACGTCATATGCTATTCCTCGGTCCCTTACAACCCTACCGTCGGACCCGAC
TGTGTGTTTCTGTGTGGATCGTGGCGACGGCATCTACCGCGTGGCGCATT
GTGCAGTTCGGAGTTAGCCATCGAGCACTGCCAGGGGCAGATGACACAGA
TCACCAAGAGCATCGTGTTCGGCAATATCAAGTGATCGGAAGACTCGACA
ACAATCTGGCCGTTGGACGCCCTGTTGGACAGCGCGATAGCTTTCTCTGG
GCGATTTTCTACATGGTGTTTTAGAGTCCAATCGTCTGGTTACGGTGGAC
TTGGATGTTTCAGCACCAATGTACCATGGCTGTGCCGCTTATGTACAAAA
ATAGGCGTATCCACTTGTATACGCGCCAATAGTTGTGCCCACATGAGGGC
TGACGGCTAGAATAGGCACAGTAAAAATTATATATTGCTCCTCCATGTAT
CCATGGATGGAATTATTTGCTGTATTGCACCCAGCGGCAGAATGCAGCAA
GCCGCAAAGGCTCGAAGAAATGCGCATTCGGAAGCGGACACAATATGCGC
CGTTTGCCAACGGTAGATGCTTGTAGCCCATACTCGCTGGTATGTAGTAA
CGTATACACCCGGTAGCTACGAGTATTTAGGTACAGCAGCAGAGTAACAG
GCACCTTCTGTGATGTCCCTAAACGATGCTGTAGCGGTGGTTGAACCGTG
AGCATTTGGGTTCGGGACAAGTCGGCAACAAACCTAAGCAATACCTCCTG
GAACACACCGGATTTCTGTGATACGTATCTCCTGCACGGCAACACGGCTG
CCCTGTGTCTGTGTCGCCGCATCATCAACGGAAATACTGCCCCCC
back to top

Coding sequence (CDS) from alignment at D-herbacea_F_contig104:316782..323776-

>mRNA_D-herbacea_F_contig104.467.1 ID=mRNA_D-herbacea_F_contig104.467.1|Name=mRNA_D-herbacea_F_contig104.467.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=2202bp|location=Sequence derived from alignment at D-herbacea_F_contig104:316782..323776- (Desmarestia herbacea DmunF female)
ATGGCTGACACGGGTTTTGGAGGCGGGTCGGCGGCTGCCCCCTCAGTTGA
GATCTCGAGTTCCTCGAAGGACTCTCGGGACACGTTATACAGCTTCGATG
AAACCAAGCTAGATCTCATCCGCAAGACGAAGCCATGGATGCAAGAATGG
CTGACACGGGTTTTGGAGGCGGGTCGGCGGCTGCCCCCTCAGTTGAGATC
TCGAGTTCCTCGAAGGACTCTCGGGACACGTTATACAGCTTCGATGAAAC
CAAGCTAGATCTCATCCGCAAGACGAAGCCATGGATGCAAGACCCCAAGT
ACTTCAAGAAAGTCAAGATTTCGCCATCGGCAGCTATGAAGATGCCCCAA
GTACTTCAAGAAAGTCAAGATTTCGCCATCGGCAGCTATGAAGATGCTGA
TGCATGCCAACTCTGGGGTCGAGAAGGGCATGGCTGCCGGAGGAAAGCCT
GTGGAGATAATGGGCATGATGTTGGGGAGGCCTGACACGGAGACGCCGAA
CGCTTTGATCGTCACAGATCTGATGCATGCCAACTCTGGGGTCGAGAAGG
GCATGGCTGCCGGAGGAAAGCCTGTGGAGATAATGGGCATGATGTTGGGG
AGGCCTGACACGGAGACGCCGAACGCTTTGATCGTCACAGATGTGTTCCC
ACTGCCAGTTGAAGGGGCGGAGACCAAAGTGCTGGCTGATGATCAAGAGG
TGGCGAATTACATGATCGGCCTTGGGGATTTGCTCGAGACGGTGTTCCCA
CTGCCAGTTGAAGGGGCGGAGACCAAAGTGCTGGCTGATGATCAAGAGGT
GGCGAATTACATGATCGGCCTTGGGGATTTGCTCGAGACGACGCGGAAGG
AGCGATTCATGGGGTGGTATCATAGCCACCCGTTCGATGTCGAGGTGCAC
AGCCACTGCTTCCTCTCGTCCACGGACATCTCGACTCAGCTGTCTTGGCA
GCGAGCAGAGGACCCTCACGGCAACCCCTGGCTGGCCATTGTGACGCGGA
AGGAGCGATTCATGGGGTGGTATCATAGCCACCCGTTCGATGTCGAGGTG
CACAGCCACTGCTTCCTCTCGTCCACGGACATCTCGACTCAGCTGTCTTG
GCAGCGAGCAGAGGACCCTCACGGCAACCCCTGGCTGGCCATTGTGGTGG
ATCCCTTGCGTTCGTTGGCCAAGTCTCGCCCGGAGTTCGGTGCGTTTCGG
GTGTACCCTCCTGAGTTCAACGCCCCTCTGAACGAAGCGCCTGATGGCAA
GATCATGACCGATGACACGCAGAGGGTGGAGCTGTGGGGATCTTGCTGGA
ATCGGTGGATCCCTTGCGTTCGTTGGCCAAGTCTCGCCCGGAGTTCGGTG
CGTTTCGGGTGTACCCTCCTGAGTTCAACGCCCCTCTGAACGAAGCGCCT
GATGGCAAGATCATGACCGATGACACGCAGAGGGTGGAGCTGTGGGGATC
TTGCTGGAATCGGTATTATGCCATGGAGATCGAATACTTCATGAGCTCCC
TGGCATCCGACGTGATGGGTATCCTCACGGAGAACTTCCTGTGGATGCGT
ACGCTAGGCTCGACCCCTATCCTCGAGAACGAGGTATTATGCCATGGAGA
TCGAATACTTCATGAGCTCCCTGGCATCCGACGTGATGGGTATCCTCACG
GAGAACTTCCTGTGGATGCGTACGCTAGGCTCGACCCCTATCCTCGAGAA
CGAGAACCGGGAACGCTTCTCTGAGCGCATTGGCAACGTGGCAGACAAGG
TGGAGCACTGCGATGTACACATGACCCATGGGGCAGGCGCGAGCGTGAGC
GGCTACTTGGTAGCGGACCCGTCGAGCGTCAAGCCAAAGGAGGAATCAGC
GCTATCCAAGACAACGCACGGCAGAACCGGGAACGCTTCTCTGAGCGCAT
TGGCAACGTGGCAGACAAGGTGGAGCACTGCGATGTACACATGACCCATG
GGGCAGGCGCGAGCGTGAGCGGCTACTTGGTAGCGGACCCGTCGAGCGTC
AAGCCAAAGGAGGAATCAGCGCTATCCAAGACAACGCACGGCAGTTCGGA
GTTAGCCATCGAGCACTGCCAGGGGCAGATGACACAGATCACCAAGAGCA
TCGTGTTCGGCAATATCAAGTGATTCGGAGTTAGCCATCGAGCACTGCCA
GGGGCAGATGACACAGATCACCAAGAGCATCGTGTTCGGCAATATCAAGT
GA
back to top