mRNA_D-herbacea_M_contig996.16270.1 (mRNA) Desmarestia herbacea DmunM male
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Overview
Homology
BLAST of mRNA_D-herbacea_M_contig996.16270.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 185 bits (470), Expect = 2.040e-53 Identity = 116/249 (46.59%), Postives = 137/249 (55.02%), Query Frame = 1
Query: 304 DSINRCGHGDNMLTYTEGNRRQPHGFKSVQVLATAVDPRIKHLYGISEDQHADVWKLVQTEAVNMVLQTRQENNSR--------------------------------------------VGG------NSGADDSTTSLIAKTMYEE----KGKTGXXXXXXXDIDHGEDGSDEKQDEERSSRVYLDPLEWWRVNSADFPHLAILARRVLAIPATKVESECLFSCAGNIVTKTRNRLAPSTVELLVLL 888
D INR G G N+L Y EG RRQP GFK VQVLATA+DPR K LYG+ ED+ ADVWKLV+ EAV + ++TR NS+ VGG + GAD S LI ++ E K TG ++++ ++VYLDPL+WWRV ADFPHLA LARRVLAIPAT+ ESE LFSCAGNIVTK RN LAP+TVELLVLL
Sbjct: 50 DFINRWGDGRNILIYKEGRRRQPGGFKPVQVLATALDPRTKILYGVDEDEKADVWKLVEEEAVKIAVETRNSENSQRASSQQGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQAVGGARTPQLDEGADSSFVRLITSSVRVELTAFKVSTGIKMY---------------EEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLL 283
BLAST of mRNA_D-herbacea_M_contig996.16270.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 189 bits (481), Expect = 1.800e-52 Identity = 128/361 (35.46%), Postives = 172/361 (47.65%), Query Frame = 1
Query: 25 IQDVITRWWSTFQMVVRLLELREPIEKHEEADKLEQMLTAADWAVLGMIRPVLEPFMHCKLLLGGRKYVTGSFVVPVIHDLRINLE----------------------EVMAPHNDSI-----NRCGHGDNMLTYTEGNRRQPHGFKSVQVLATAVDPRIKHLYGISEDQHADVWKLVQTEAVNMVLQTR-----------------QENNSRVGGNSGA-----------------------------DDSTTSLIAKTMYEEKGKTGXXXXXXXDIDHGEDGSDEKQDEERSSRVYLDPLEWWRVNSADFPHLAILARRVLAIPATKVESECLFSCAGNIVTKTRNRLAPSTVELLVLL 888
+QDV TRWWST+ MVVRLL L + I+ HE D++ +L+ DW VL +I P+L PFM + L G +YVTGS + + +LR LE E + P +++ NR G G N+L Y EG RRQP GFK QV ATA+DPR KHLYGI + +HA VW+ V + AV++ L Q + +GG GA D+ L+A E D+ G +V+ +PL+ WR ++P LA LARRVLAIP+++ +SE +FS AG VT TR+RL VELLV L
Sbjct: 192 MQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQQGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIALGKHAGDKAPASAEKPASDPVQTQPAPLGGGQGASKRPRMSAFEAAAAXXXXXXXXXXXXXSADEKREQLVAIVDMEVSAFKAAPGIRVWDMQKTNTGD---------KKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYL 543
BLAST of mRNA_D-herbacea_M_contig996.16270.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE) HSP 1 Score: 187 bits (475), Expect = 9.630e-52 Identity = 118/320 (36.88%), Postives = 157/320 (49.06%), Query Frame = 1
Query: 25 IQDVITRWWSTFQMVVRLLELREPIEKHEEADKLEQMLTAADWAVLGMIRPVLEPFMHCKLLLGGRKYVTGSFVVPVIHDLRINLEEVMAP---------------------------HNDSINRCGHGDNMLTYTEGNRRQPHGFKSVQVLATAVDPRIKHLYGISEDQHADVWKLVQTEAVNMVLQTRQENNSRVGGNSGADDST-TSLIAKTMYEEKGKTGXXXXXXXDIDH--------GEDGSDEKQDEERS------------------------SRVYLDPLEWWRVNSADFPHLAILARRVLAIPATKVESE 804
+QDV TRWWS++ M+ RLL L + I+ HE D + +L+ DW VL +I P+L PFM + L G KYVTGS VP I +LR LE +A D +NR G G ++L Y EG RRQP GFK QV ATAVDPR KHLYGI + +HA VW+ V T+AV++ + +N+ G++ A T +A + H G DEK+++ S +VY DPL+WWR +FPHLA LARRVLAIP+++ SE
Sbjct: 228 LQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGLEAAIADLRATDRFGISASTREAMEAVLPDAEALWEDFLNRWGDGSSILEYREGKRRQPQGFKLQQVCATAVDPRAKHLYGIRQAEHASVWRAVATKAVDIAAEKFSSDNTATSGSAPAAQPVGTPPVAPGGQGAPKRARLSAFEAAAAAHAGAAASSAGGQTLDEKREQLASVVDLEVASFQTTPGISIWYWGTDGKKVYNDPLDWWRTRQMEFPHLAALARRVLAIPSSQAHSE 547
BLAST of mRNA_D-herbacea_M_contig996.16270.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 163 bits (413), Expect = 1.090e-41 Identity = 126/389 (32.39%), Postives = 164/389 (42.16%), Query Frame = 1
Query: 10 DSKRPIQDVITRWWSTFQMVVRLLELREPIEKHEEADKLEQMLTAADWAVLGMIRPVLEPFMHCKLLLGGRKYVTGSFVVPVIHDLRINLEEVM--------------------------APHNDSINRCGHGDNMLTYTEGNRRQPHGFKSVQVLATAVDPRIKHLYGISEDQHADVWKLVQTEAVNMVLQTRQENNSRVGG-----------------------------------------NSGADDSTTSLIAKTMYEEKGKTGXXXXXXXDIDHGEDGSDEKQD-----------------------------EERSSRVYLDPLEWWRVNSADFPHLAILARRVLAIPATKVESECLFSCAGNIVTKTRNRLAPSTVELLVLL 888
+ K +QDV TRWWST+ + RL+ LR PI +HE D +L DW VL ++ +L+PFM + L K VT V P I DL+ L+E + A D R G ++L YTEG RRQP GFK QVLATA+ PR K LYGI E +H+DVW EAV + ++ + + S S+ + XXXXXXX HG+ EE+ V PLEWWRV + ++P LA LARRVL IPA + +SE +FS AG +VTKTR R+ P V L+V L
Sbjct: 152 ERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGLDEAVERLQAHSCPAESIVAEAKKDVILCAQALQTDLSRRWGDRTDVLVYTEGPRRQPRGFKKEQVLATALGPRSKSLYGIEETEHSDVWDAGANEAVKVAIEAKATEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQSAGASSSPIPVEPAXXXXXXXXXXXXXXXXXXAHGDKQQSANASSSPLRRQMESIISREVDAFKITPGLAVSWEEKGQEVRGKPLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFL 540
BLAST of mRNA_D-herbacea_M_contig996.16270.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE) HSP 1 Score: 146 bits (368), Expect = 1.020e-36 Identity = 111/305 (36.39%), Postives = 157/305 (51.48%), Query Frame = 1
Query: 10 DSKRPIQDVITRWWSTFQMVVRLLELREPIEKHEEADKLEQMLTAADWAVLGMIRPVLEPFMHCKLLLGGRKYVTGSFVVPVIHDLRINLEEVM------APHNDSINRCGHGDNMLTYTEGNRR------QPHGFKSVQVLATAVDPRIKHLYGISEDQHADVWKLVQTEAVNMVLQTRQENNSRVGGNSGADDSTTSLIAKTMYEEKGKTGXXXXXXXDIDHGEDGSDEKQDEERSSRVYLDPLEWWRVNSADFPHLAILARRVLAIPATKVESECLFSCAGNIVTKTRNRLAPSTVELLVLL 888
+ K+ +QDV TRWWST+ + RLL LR PI +HE D + +L DW VL ++ P+ +PF+ + K VT S V+P I DLR L+E + A +SI D + + + R +P GFK QVLATA+DPR K LYGI E +H+DVW+ V EAV + ++ + +++ G +++SLI E XXXXXXXD +KQ +S RVL IPA++ +SE +FS AG +VTKTR R+ P VEL++ L
Sbjct: 196 ERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADLRDELDEAVERLQAHACPAESIVAEAKKD--VFFAPKHVRPTSVIVEPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATEDTQSAG------ASSSLIP---VEPAAXXXXXXXXXXDFAAASAVPGDKQQSANASSS---------------------TSRVLCIPASQPQSERVFSSAGLVVTKTRARMDPENVELMLFL 468
BLAST of mRNA_D-herbacea_M_contig996.16270.1 vs. uniprot
Match: A0A8C1EYV6_CYPCA (Zinc finger BED domain-containing protein 1-like n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1EYV6_CYPCA) HSP 1 Score: 125 bits (315), Expect = 5.930e-30 Identity = 100/321 (31.15%), Postives = 150/321 (46.73%), Query Frame = 1
Query: 1 LGSDSKRPIQDVITRWWSTFQMVVRLLELREPIEKHEEADKLEQM------LTAADWAVLGMIRPVLEPFMHCKLLLGGRKYVTGSFVVPVIHDLRINLEEVMAPHNDSINRCGHGDNMLT-----YTEGNRRQPHGFKSVQVLATAVDPRIKHLYGISEDQHADVWKLVQTEAVNMV--LQTRQENNSRVGGNSGADDSTTSLIAKTMYEEKGKTGXXXXXXXDIDHGEDGSDEKQDEERSSRVYL------------DPLEWWRVNSADFPHLAILARRVLAIPATKVESECLFSCAGNIVTKTRNRLAPSTVELLVLL 888
+G+D+ +QDV TRW ST+QM+ RLLE R P+ + Q L W+++ + VLEPF + L G++YVT S + ++H+L+I ++ + H +T TE P+ + +LATA+DPR + L ++ DQ V VQT A+ +V Q RQ S G +S A +S + + K T D Q + + L +PL WW++N+A +P LA LA+ +L IPAT SE LFS AGNI +K R L+ V++L L
Sbjct: 54 MGTDTNMLVQDVCTRWNSTYQMLSRLLEQRWPVTATLSDPAVTQRAKHYLDLKPEQWSLIEELCQVLEPFEAATVFLSGQQYVTLSALPQLVHNLKITVQSPNPETAPVRSFQAHATEQITARWQGLTEFTPESPN----ITLLATALDPRFRKLKFLTADQVFKVQSTVQTMALAVVDKKQVRQPTASENGASSTAHNSPKAHVKKV-------TSFLDILGSDSSXXXXXXXXXQLNQAVQKEILMYFGEHPLSKKENPLSWWKMNAARYPTLAKLAKTMLCIPATSTPSERLFSAAGNIASKRRASLSSEHVDMLTFL 363
BLAST of mRNA_D-herbacea_M_contig996.16270.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE) HSP 1 Score: 124 bits (311), Expect = 3.140e-29 Identity = 76/207 (36.71%), Postives = 102/207 (49.28%), Query Frame = 1
Query: 10 DSKRPIQDVITRWWSTFQMVVRLLELREPIEKHEEADKLEQMLTAADWAVLGMIRPVLEPFMHCKLLLGGRKYVTGSFVVPVIHDLRINLEE--------------VMAPHNDSINRCG------------HGDNMLTYTEGNRRQPHGFKSVQVLATAVDPRIKHLYGISEDQHADVWKLVQTEAVNMVLQTRQENNSRVGGNSGA 552
+ K+ +QDV TRWWST E D + +L DW VL ++ P+L PFM + L K VT S V I DLR L+E ++A I RC G ++L YTEG RRQP GFK QVLATA+DPR K LYGI E +H+DVW+ V EAV + ++ + +++ G S +
Sbjct: 140 ERKKVVQDVETRWWST----------------PREIDSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADLRDELDEAIERLQAYSCPAESIVAEAKKDILRCAPALQTDLSRRWRDGTDVLVYTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATEDTQSAGASSS 330
BLAST of mRNA_D-herbacea_M_contig996.16270.1 vs. uniprot
Match: A0A8C1VWD7_CYPCA (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1VWD7_CYPCA) HSP 1 Score: 117 bits (294), Expect = 3.810e-26 Identity = 96/321 (29.91%), Postives = 150/321 (46.73%), Query Frame = 1
Query: 1 LGSDSKRPIQDVITRWWSTFQMVVRLLELREPIEKHEEADKLEQM------LTAADWAVLGMIRPVLEPFMHCKLLLGGRKYVTGSFVVPVIHDLRINLEEVMAPHNDSINRCGHGDNMLT-----YTEGNRRQPHGFKSVQVLATAVDPRIKHLYGISEDQHADVWKLVQTEAVNMV--LQTRQENNSRVGGNSGADDSTTSLIAKTMYEEKGKTGXXXXXXXDIDHGEDGSDEKQDEERSSRVYL------------DPLEWWRVNSADFPHLAILARRVLAIPATKVESECLFSCAGNIVTKTRNRLAPSTVELLVLL 888
+G+++ +QDV TRW ST+Q++ RLL+ R P+ + Q L W+++ + VLEPF + L G++Y+T S + ++H+L+I ++ + H +T TE P+ + +LATA+DPR + L ++ DQ V VQT A+ +V Q RQ S G +S A +S + + K T D Q + + L +PL WW++N+A +P LA LA+ +L IPAT SE LFS AGNI +K R L+ V++L L
Sbjct: 231 MGTETYMLVQDVCTRWNSTYQILSRLLKQRWPVTATLSDPAVTQRAKHYLDLKPEQWSLIEELCQVLEPFEAATVFLTGQQYITLSALPQLVHNLKITVQSPNPETAPVRSFQAHATEQITARWQGLTEFTPESPN----ITLLATALDPRFQKLKFLTADQVFKVQSTVQTMALVVVDKKQVRQPTASENGTSSTAHNSPEAHVKKV-------TSFLDILGSDSSXXXXXXXXXQLNQAVQKEILMYFGEHPLSKKENPLSWWKMNAARYPTLAKLAKTMLCIPATSTPSERLFSAAGNIASKRRASLSSEHVDMLTFL 540
BLAST of mRNA_D-herbacea_M_contig996.16270.1 vs. uniprot
Match: A0A8C5GP03_9TELE (BED-type domain-containing protein n=5 Tax=Percomorphaceae TaxID=1489872 RepID=A0A8C5GP03_9TELE) HSP 1 Score: 114 bits (285), Expect = 8.600e-25 Identity = 106/328 (32.32%), Postives = 153/328 (46.65%), Query Frame = 1
Query: 1 LGSDSKRPIQDVITRWWSTFQMVVRLLELREPIE------------KHEEADKLEQMLTAADWAVLGMIRPVLEPFMHCKLLLGGRKYVTGSFVVPVIHDLRINLEEVMAPHNDSIN-RCGHGDNMLTYTEGNRRQPHGFKSVQ------VLATAVDPRIKHLYGISEDQHADVWKLVQTEAVNMVLQTRQENNSRVGGNSGADD----STTSLIAKTMYEEKGKTGXXXXXXXDIDHGEDGSDEKQDEERSSRVYL---------DPLEWWRVNSADFPHLAILARRVLAIPATKVESECLFSCAGNIVTKTRNRLAPSTVELLVLL 888
+G+ S +QDV TRW STF M+ RLLE R P+ KH K EQ W V+ + LEPF + L G++YVT S + ++ L+ + + P ++ + H D TE + G Q +LA A+DPR + L +S D+ V VQT A+ + +Q+N S +G D S SL+ K + T XXXXXX + Q+ ++ +Y +PL WW+VN+A +P L+ LA+ L IPAT SE LFS AGNI +K R L+ V++L L
Sbjct: 321 MGTPSHMLVQDVSTRWNSTFHMLSRLLEQRWPVTAALSDPAVTPRGKHYLDLKPEQ------WDVIQELNQALEPFEGATVFLSGQEYVTLSALPQLVQSLK---KSIQTPAFETAPVKSYHTD----VTEQITARWQGLDVFQPESNHILLAAALDPRFRKLKFLSPDEVFKVQSTVQTLALAAKKEAKQKNASEIGSPITTQDKPLTSAKSLLEKILGSSDSSTXXXXXXXQQL---------SQNVQKEVLMYFGEHPLSKKENPLSWWKVNAARYPTLSKLAQSFLCIPATSTPSERLFSAAGNIASKRRASLSSEHVDMLTFL 626
BLAST of mRNA_D-herbacea_M_contig996.16270.1 vs. uniprot
Match: UPI0010550194 (uncharacterized protein LOC114468254 n=1 Tax=Gouania willdenowi TaxID=441366 RepID=UPI0010550194) HSP 1 Score: 113 bits (283), Expect = 2.400e-24 Identity = 104/327 (31.80%), Postives = 153/327 (46.79%), Query Frame = 1
Query: 1 LGSDSKRPIQDVITRWWSTFQMVVRLLELREPIE------------KHEEADKLEQMLTAADWAVLGMIRPVLEPFMHCKLLLGGRKYVTGSFVVPVIHDLRINLEEVMAPHNDSINRCGHGDNMLTYTEGNRRQPHGFKSVQ------VLATAVDPRIKHLYGISEDQHADVWKLVQTEAVNMVLQTRQENNSRVGGNSGADD----STTSLIAKTMYEEKGKTGXXXXXXXDIDHGEDGSDEKQDEERSSRVYL---------DPLEWWRVNSADFPHLAILARRVLAIPATKVESECLFSCAGNIVTKTRNRLAPSTVELLVLL 888
+G+ S +QDV TRW STF M+ RLLE R P+ KH K EQ W V+ + LEPF + L G++YVT S + ++ L+ + + P ++ + ++ TE + G Q +LA A+DPR + L +S D+ V VQT A+ + +Q+N S +G D S SL+ K + T XXXXXX + Q+ ++ +Y +PL WW+VN+A +P L+ LA+ L IPAT SE LFS AGNI +K R L+ V++L L
Sbjct: 1440 MGTPSHMLVQDVSTRWNSTFHMLSRLLEQRWPVTAALSDPAVTPRGKHYLDLKPEQ------WDVIQELNQALEPFEGATVFLSGQEYVTLSALPQLVQSLK---KSIQTPAFETAPVKSYQTDV---TEQITARWQGLDVFQPESNHILLAAALDPRFRKLKFLSPDEVFKVQSTVQTLALAAKKEAKQKNASEIGSPITTQDKPLTSAKSLLEKILGSSDSSTXXXXXXXQQL---------SQNVQKEVLMYFGEHPLSKKENPLSWWKVNAARYPTLSKLAQSFLCIPATSTPSERLFSAAGNIASKRRASLSSEHVDMLTFL 1745 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig996.16270.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_M_contig996.16270.1 >prot_D-herbacea_M_contig996.16270.1 ID=prot_D-herbacea_M_contig996.16270.1|Name=mRNA_D-herbacea_M_contig996.16270.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=296bp LGSDSKRPIQDVITRWWSTFQMVVRLLELREPIEKHEEADKLEQMLTAADback to top mRNA from alignment at D-herbacea_M_contig996:823..1959- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_M_contig996.16270.1 ID=mRNA_D-herbacea_M_contig996.16270.1|Name=mRNA_D-herbacea_M_contig996.16270.1|organism=Desmarestia herbacea DmunM male|type=mRNA|length=1137bp|location=Sequence derived from alignment at D-herbacea_M_contig996:823..1959- (Desmarestia herbacea DmunM male)back to top Coding sequence (CDS) from alignment at D-herbacea_M_contig996:823..1959- >mRNA_D-herbacea_M_contig996.16270.1 ID=mRNA_D-herbacea_M_contig996.16270.1|Name=mRNA_D-herbacea_M_contig996.16270.1|organism=Desmarestia herbacea DmunM male|type=CDS|length=1776bp|location=Sequence derived from alignment at D-herbacea_M_contig996:823..1959- (Desmarestia herbacea DmunM male)back to top |