mRNA_D-herbacea_M_contig996.16270.1 (mRNA) Desmarestia herbacea DmunM male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_M_contig996.16270.1
Unique NamemRNA_D-herbacea_M_contig996.16270.1
TypemRNA
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Homology
BLAST of mRNA_D-herbacea_M_contig996.16270.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 2.040e-53
Identity = 116/249 (46.59%), Postives = 137/249 (55.02%), Query Frame = 1
Query:  304 DSINRCGHGDNMLTYTEGNRRQPHGFKSVQVLATAVDPRIKHLYGISEDQHADVWKLVQTEAVNMVLQTRQENNSR--------------------------------------------VGG------NSGADDSTTSLIAKTMYEE----KGKTGXXXXXXXDIDHGEDGSDEKQDEERSSRVYLDPLEWWRVNSADFPHLAILARRVLAIPATKVESECLFSCAGNIVTKTRNRLAPSTVELLVLL 888
            D INR G G N+L Y EG RRQP GFK VQVLATA+DPR K LYG+ ED+ ADVWKLV+ EAV + ++TR   NS+                                            VGG      + GAD S   LI  ++  E    K  TG                   ++++  ++VYLDPL+WWRV  ADFPHLA LARRVLAIPAT+ ESE LFSCAGNIVTK RN LAP+TVELLVLL
Sbjct:   50 DFINRWGDGRNILIYKEGRRRQPGGFKPVQVLATALDPRTKILYGVDEDEKADVWKLVEEEAVKIAVETRNSENSQRASSQQGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQAVGGARTPQLDEGADSSFVRLITSSVRVELTAFKVSTGIKMY---------------EEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLL 283          
BLAST of mRNA_D-herbacea_M_contig996.16270.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 189 bits (481), Expect = 1.800e-52
Identity = 128/361 (35.46%), Postives = 172/361 (47.65%), Query Frame = 1
Query:   25 IQDVITRWWSTFQMVVRLLELREPIEKHEEADKLEQMLTAADWAVLGMIRPVLEPFMHCKLLLGGRKYVTGSFVVPVIHDLRINLE----------------------EVMAPHNDSI-----NRCGHGDNMLTYTEGNRRQPHGFKSVQVLATAVDPRIKHLYGISEDQHADVWKLVQTEAVNMVLQTR-----------------QENNSRVGGNSGA-----------------------------DDSTTSLIAKTMYEEKGKTGXXXXXXXDIDHGEDGSDEKQDEERSSRVYLDPLEWWRVNSADFPHLAILARRVLAIPATKVESECLFSCAGNIVTKTRNRLAPSTVELLVLL 888
            +QDV TRWWST+ MVVRLL L + I+ HE  D++  +L+  DW VL +I P+L PFM  +  L G +YVTGS  +  + +LR  LE                      E + P  +++     NR G G N+L Y EG RRQP GFK  QV ATA+DPR KHLYGI + +HA VW+ V + AV++ L                    Q   + +GG  GA                             D+    L+A    E             D+     G           +V+ +PL+ WR    ++P LA LARRVLAIP+++ +SE +FS AG  VT TR+RL    VELLV L
Sbjct:  192 MQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQQGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIALGKHAGDKAPASAEKPASDPVQTQPAPLGGGQGASKRPRMSAFEAAAAXXXXXXXXXXXXXSADEKREQLVAIVDMEVSAFKAAPGIRVWDMQKTNTGD---------KKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYL 543          
BLAST of mRNA_D-herbacea_M_contig996.16270.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 9.630e-52
Identity = 118/320 (36.88%), Postives = 157/320 (49.06%), Query Frame = 1
Query:   25 IQDVITRWWSTFQMVVRLLELREPIEKHEEADKLEQMLTAADWAVLGMIRPVLEPFMHCKLLLGGRKYVTGSFVVPVIHDLRINLEEVMAP---------------------------HNDSINRCGHGDNMLTYTEGNRRQPHGFKSVQVLATAVDPRIKHLYGISEDQHADVWKLVQTEAVNMVLQTRQENNSRVGGNSGADDST-TSLIAKTMYEEKGKTGXXXXXXXDIDH--------GEDGSDEKQDEERS------------------------SRVYLDPLEWWRVNSADFPHLAILARRVLAIPATKVESE 804
            +QDV TRWWS++ M+ RLL L + I+ HE  D +  +L+  DW VL +I P+L PFM  +  L G KYVTGS  VP I +LR  LE  +A                              D +NR G G ++L Y EG RRQP GFK  QV ATAVDPR KHLYGI + +HA VW+ V T+AV++  +    +N+   G++ A     T  +A        +            H        G    DEK+++  S                         +VY DPL+WWR    +FPHLA LARRVLAIP+++  SE
Sbjct:  228 LQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGLEAAIADLRATDRFGISASTREAMEAVLPDAEALWEDFLNRWGDGSSILEYREGKRRQPQGFKLQQVCATAVDPRAKHLYGIRQAEHASVWRAVATKAVDIAAEKFSSDNTATSGSAPAAQPVGTPPVAPGGQGAPKRARLSAFEAAAAAHAGAAASSAGGQTLDEKREQLASVVDLEVASFQTTPGISIWYWGTDGKKVYNDPLDWWRTRQMEFPHLAALARRVLAIPSSQAHSE 547          
BLAST of mRNA_D-herbacea_M_contig996.16270.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 163 bits (413), Expect = 1.090e-41
Identity = 126/389 (32.39%), Postives = 164/389 (42.16%), Query Frame = 1
Query:   10 DSKRPIQDVITRWWSTFQMVVRLLELREPIEKHEEADKLEQMLTAADWAVLGMIRPVLEPFMHCKLLLGGRKYVTGSFVVPVIHDLRINLEEVM--------------------------APHNDSINRCGHGDNMLTYTEGNRRQPHGFKSVQVLATAVDPRIKHLYGISEDQHADVWKLVQTEAVNMVLQTRQENNSRVGG-----------------------------------------NSGADDSTTSLIAKTMYEEKGKTGXXXXXXXDIDHGEDGSDEKQD-----------------------------EERSSRVYLDPLEWWRVNSADFPHLAILARRVLAIPATKVESECLFSCAGNIVTKTRNRLAPSTVELLVLL 888
            + K  +QDV TRWWST+  + RL+ LR PI +HE  D    +L   DW VL ++  +L+PFM  +  L   K VT   V P I DL+  L+E +                          A   D   R G   ++L YTEG RRQP GFK  QVLATA+ PR K LYGI E +H+DVW     EAV + ++ +   +                                               S    S+   +            XXXXXXX   HG+                                     EE+   V   PLEWWRV + ++P LA LARRVL IPA + +SE +FS AG +VTKTR R+ P  V L+V L
Sbjct:  152 ERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGLDEAVERLQAHSCPAESIVAEAKKDVILCAQALQTDLSRRWGDRTDVLVYTEGPRRQPRGFKKEQVLATALGPRSKSLYGIEETEHSDVWDAGANEAVKVAIEAKATEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQSAGASSSPIPVEPAXXXXXXXXXXXXXXXXXXAHGDKQQSANASSSPLRRQMESIISREVDAFKITPGLAVSWEEKGQEVRGKPLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFL 540          
BLAST of mRNA_D-herbacea_M_contig996.16270.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 1.020e-36
Identity = 111/305 (36.39%), Postives = 157/305 (51.48%), Query Frame = 1
Query:   10 DSKRPIQDVITRWWSTFQMVVRLLELREPIEKHEEADKLEQMLTAADWAVLGMIRPVLEPFMHCKLLLGGRKYVTGSFVVPVIHDLRINLEEVM------APHNDSINRCGHGDNMLTYTEGNRR------QPHGFKSVQVLATAVDPRIKHLYGISEDQHADVWKLVQTEAVNMVLQTRQENNSRVGGNSGADDSTTSLIAKTMYEEKGKTGXXXXXXXDIDHGEDGSDEKQDEERSSRVYLDPLEWWRVNSADFPHLAILARRVLAIPATKVESECLFSCAGNIVTKTRNRLAPSTVELLVLL 888
            + K+ +QDV TRWWST+  + RLL LR PI +HE  D +  +L   DW VL ++ P+ +PF+  +      K VT S V+P I DLR  L+E +      A   +SI      D  + +   + R      +P GFK  QVLATA+DPR K LYGI E +H+DVW+ V  EAV + ++ +   +++  G      +++SLI     E      XXXXXXXD         +KQ    +S                         RVL IPA++ +SE +FS AG +VTKTR R+ P  VEL++ L
Sbjct:  196 ERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADLRDELDEAVERLQAHACPAESIVAEAKKD--VFFAPKHVRPTSVIVEPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATEDTQSAG------ASSSLIP---VEPAAXXXXXXXXXXDFAAASAVPGDKQQSANASSS---------------------TSRVLCIPASQPQSERVFSSAGLVVTKTRARMDPENVELMLFL 468          
BLAST of mRNA_D-herbacea_M_contig996.16270.1 vs. uniprot
Match: A0A8C1EYV6_CYPCA (Zinc finger BED domain-containing protein 1-like n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1EYV6_CYPCA)

HSP 1 Score: 125 bits (315), Expect = 5.930e-30
Identity = 100/321 (31.15%), Postives = 150/321 (46.73%), Query Frame = 1
Query:    1 LGSDSKRPIQDVITRWWSTFQMVVRLLELREPIEKHEEADKLEQM------LTAADWAVLGMIRPVLEPFMHCKLLLGGRKYVTGSFVVPVIHDLRINLEEVMAPHNDSINRCGHGDNMLT-----YTEGNRRQPHGFKSVQVLATAVDPRIKHLYGISEDQHADVWKLVQTEAVNMV--LQTRQENNSRVGGNSGADDSTTSLIAKTMYEEKGKTGXXXXXXXDIDHGEDGSDEKQDEERSSRVYL------------DPLEWWRVNSADFPHLAILARRVLAIPATKVESECLFSCAGNIVTKTRNRLAPSTVELLVLL 888
            +G+D+   +QDV TRW ST+QM+ RLLE R P+        + Q       L    W+++  +  VLEPF    + L G++YVT S +  ++H+L+I ++          +   H    +T      TE     P+    + +LATA+DPR + L  ++ DQ   V   VQT A+ +V   Q RQ   S  G +S A +S  + + K        T        D           Q  +   +  L            +PL WW++N+A +P LA LA+ +L IPAT   SE LFS AGNI +K R  L+   V++L  L
Sbjct:   54 MGTDTNMLVQDVCTRWNSTYQMLSRLLEQRWPVTATLSDPAVTQRAKHYLDLKPEQWSLIEELCQVLEPFEAATVFLSGQQYVTLSALPQLVHNLKITVQSPNPETAPVRSFQAHATEQITARWQGLTEFTPESPN----ITLLATALDPRFRKLKFLTADQVFKVQSTVQTMALAVVDKKQVRQPTASENGASSTAHNSPKAHVKKV-------TSFLDILGSDSSXXXXXXXXXQLNQAVQKEILMYFGEHPLSKKENPLSWWKMNAARYPTLAKLAKTMLCIPATSTPSERLFSAAGNIASKRRASLSSEHVDMLTFL 363          
BLAST of mRNA_D-herbacea_M_contig996.16270.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 3.140e-29
Identity = 76/207 (36.71%), Postives = 102/207 (49.28%), Query Frame = 1
Query:   10 DSKRPIQDVITRWWSTFQMVVRLLELREPIEKHEEADKLEQMLTAADWAVLGMIRPVLEPFMHCKLLLGGRKYVTGSFVVPVIHDLRINLEE--------------VMAPHNDSINRCG------------HGDNMLTYTEGNRRQPHGFKSVQVLATAVDPRIKHLYGISEDQHADVWKLVQTEAVNMVLQTRQENNSRVGGNSGA 552
            + K+ +QDV TRWWST                  E D +  +L   DW VL ++ P+L PFM  +  L   K VT S V   I DLR  L+E              ++A     I RC              G ++L YTEG RRQP GFK  QVLATA+DPR K LYGI E +H+DVW+ V  EAV + ++ +   +++  G S +
Sbjct:  140 ERKKVVQDVETRWWST----------------PREIDSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADLRDELDEAIERLQAYSCPAESIVAEAKKDILRCAPALQTDLSRRWRDGTDVLVYTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATEDTQSAGASSS 330          
BLAST of mRNA_D-herbacea_M_contig996.16270.1 vs. uniprot
Match: A0A8C1VWD7_CYPCA (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1VWD7_CYPCA)

HSP 1 Score: 117 bits (294), Expect = 3.810e-26
Identity = 96/321 (29.91%), Postives = 150/321 (46.73%), Query Frame = 1
Query:    1 LGSDSKRPIQDVITRWWSTFQMVVRLLELREPIEKHEEADKLEQM------LTAADWAVLGMIRPVLEPFMHCKLLLGGRKYVTGSFVVPVIHDLRINLEEVMAPHNDSINRCGHGDNMLT-----YTEGNRRQPHGFKSVQVLATAVDPRIKHLYGISEDQHADVWKLVQTEAVNMV--LQTRQENNSRVGGNSGADDSTTSLIAKTMYEEKGKTGXXXXXXXDIDHGEDGSDEKQDEERSSRVYL------------DPLEWWRVNSADFPHLAILARRVLAIPATKVESECLFSCAGNIVTKTRNRLAPSTVELLVLL 888
            +G+++   +QDV TRW ST+Q++ RLL+ R P+        + Q       L    W+++  +  VLEPF    + L G++Y+T S +  ++H+L+I ++          +   H    +T      TE     P+    + +LATA+DPR + L  ++ DQ   V   VQT A+ +V   Q RQ   S  G +S A +S  + + K        T        D           Q  +   +  L            +PL WW++N+A +P LA LA+ +L IPAT   SE LFS AGNI +K R  L+   V++L  L
Sbjct:  231 MGTETYMLVQDVCTRWNSTYQILSRLLKQRWPVTATLSDPAVTQRAKHYLDLKPEQWSLIEELCQVLEPFEAATVFLTGQQYITLSALPQLVHNLKITVQSPNPETAPVRSFQAHATEQITARWQGLTEFTPESPN----ITLLATALDPRFQKLKFLTADQVFKVQSTVQTMALVVVDKKQVRQPTASENGTSSTAHNSPEAHVKKV-------TSFLDILGSDSSXXXXXXXXXQLNQAVQKEILMYFGEHPLSKKENPLSWWKMNAARYPTLAKLAKTMLCIPATSTPSERLFSAAGNIASKRRASLSSEHVDMLTFL 540          
BLAST of mRNA_D-herbacea_M_contig996.16270.1 vs. uniprot
Match: A0A8C5GP03_9TELE (BED-type domain-containing protein n=5 Tax=Percomorphaceae TaxID=1489872 RepID=A0A8C5GP03_9TELE)

HSP 1 Score: 114 bits (285), Expect = 8.600e-25
Identity = 106/328 (32.32%), Postives = 153/328 (46.65%), Query Frame = 1
Query:    1 LGSDSKRPIQDVITRWWSTFQMVVRLLELREPIE------------KHEEADKLEQMLTAADWAVLGMIRPVLEPFMHCKLLLGGRKYVTGSFVVPVIHDLRINLEEVMAPHNDSIN-RCGHGDNMLTYTEGNRRQPHGFKSVQ------VLATAVDPRIKHLYGISEDQHADVWKLVQTEAVNMVLQTRQENNSRVGGNSGADD----STTSLIAKTMYEEKGKTGXXXXXXXDIDHGEDGSDEKQDEERSSRVYL---------DPLEWWRVNSADFPHLAILARRVLAIPATKVESECLFSCAGNIVTKTRNRLAPSTVELLVLL 888
            +G+ S   +QDV TRW STF M+ RLLE R P+             KH    K EQ      W V+  +   LEPF    + L G++YVT S +  ++  L+   + +  P  ++   +  H D     TE    +  G    Q      +LA A+DPR + L  +S D+   V   VQT A+    + +Q+N S +G      D    S  SL+ K +      T XXXXXX  +          Q+ ++   +Y          +PL WW+VN+A +P L+ LA+  L IPAT   SE LFS AGNI +K R  L+   V++L  L
Sbjct:  321 MGTPSHMLVQDVSTRWNSTFHMLSRLLEQRWPVTAALSDPAVTPRGKHYLDLKPEQ------WDVIQELNQALEPFEGATVFLSGQEYVTLSALPQLVQSLK---KSIQTPAFETAPVKSYHTD----VTEQITARWQGLDVFQPESNHILLAAALDPRFRKLKFLSPDEVFKVQSTVQTLALAAKKEAKQKNASEIGSPITTQDKPLTSAKSLLEKILGSSDSSTXXXXXXXQQL---------SQNVQKEVLMYFGEHPLSKKENPLSWWKVNAARYPTLSKLAQSFLCIPATSTPSERLFSAAGNIASKRRASLSSEHVDMLTFL 626          
BLAST of mRNA_D-herbacea_M_contig996.16270.1 vs. uniprot
Match: UPI0010550194 (uncharacterized protein LOC114468254 n=1 Tax=Gouania willdenowi TaxID=441366 RepID=UPI0010550194)

HSP 1 Score: 113 bits (283), Expect = 2.400e-24
Identity = 104/327 (31.80%), Postives = 153/327 (46.79%), Query Frame = 1
Query:    1 LGSDSKRPIQDVITRWWSTFQMVVRLLELREPIE------------KHEEADKLEQMLTAADWAVLGMIRPVLEPFMHCKLLLGGRKYVTGSFVVPVIHDLRINLEEVMAPHNDSINRCGHGDNMLTYTEGNRRQPHGFKSVQ------VLATAVDPRIKHLYGISEDQHADVWKLVQTEAVNMVLQTRQENNSRVGGNSGADD----STTSLIAKTMYEEKGKTGXXXXXXXDIDHGEDGSDEKQDEERSSRVYL---------DPLEWWRVNSADFPHLAILARRVLAIPATKVESECLFSCAGNIVTKTRNRLAPSTVELLVLL 888
            +G+ S   +QDV TRW STF M+ RLLE R P+             KH    K EQ      W V+  +   LEPF    + L G++YVT S +  ++  L+   + +  P  ++     +  ++   TE    +  G    Q      +LA A+DPR + L  +S D+   V   VQT A+    + +Q+N S +G      D    S  SL+ K +      T XXXXXX  +          Q+ ++   +Y          +PL WW+VN+A +P L+ LA+  L IPAT   SE LFS AGNI +K R  L+   V++L  L
Sbjct: 1440 MGTPSHMLVQDVSTRWNSTFHMLSRLLEQRWPVTAALSDPAVTPRGKHYLDLKPEQ------WDVIQELNQALEPFEGATVFLSGQEYVTLSALPQLVQSLK---KSIQTPAFETAPVKSYQTDV---TEQITARWQGLDVFQPESNHILLAAALDPRFRKLKFLSPDEVFKVQSTVQTLALAAKKEAKQKNASEIGSPITTQDKPLTSAKSLLEKILGSSDSSTXXXXXXXQQL---------SQNVQKEVLMYFGEHPLSKKENPLSWWKVNAARYPTLSKLAQSFLCIPATSTPSERLFSAAGNIASKRRASLSSEHVDMLTFL 1745          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig996.16270.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWI1_9PHAE2.040e-5346.59Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
D8LCS5_ECTSI1.800e-5235.46Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5KUY5_9PHAE9.630e-5236.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHP9_9PHAE1.090e-4132.39Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A6H5JJV8_9PHAE1.020e-3636.39Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A8C1EYV6_CYPCA5.930e-3031.15Zinc finger BED domain-containing protein 1-like n... [more]
A0A6H5KVI1_9PHAE3.140e-2936.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8C1VWD7_CYPCA3.810e-2629.91Dimer_Tnp_hAT domain-containing protein n=2 Tax=Cy... [more]
A0A8C5GP03_9TELE8.600e-2532.32BED-type domain-containing protein n=5 Tax=Percomo... [more]
UPI00105501942.400e-2431.80uncharacterized protein LOC114468254 n=1 Tax=Gouan... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig996contigD-herbacea_M_contig996:823..1959 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score198.0
Seed ortholog evalue6.3e-48
Seed eggNOG ortholog2880.D7G5Z0
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein dimerization activity
EggNOG OGsKOG1121@1,KOG1121@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size888
Cds size888
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig996.16270.1prot_D-herbacea_M_contig996.16270.1Desmarestia herbacea DmunM malepolypeptideD-herbacea_M_contig996 823..1959 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935827.6726787-CDS-D-herbacea_M_contig996:822..11251622935827.6726787-CDS-D-herbacea_M_contig996:822..1125Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig996 823..1125 -
1690880722.859446-CDS-D-herbacea_M_contig996:822..11251690880722.859446-CDS-D-herbacea_M_contig996:822..1125Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig996 823..1125 -
1622935827.6898875-CDS-D-herbacea_M_contig996:1170..12161622935827.6898875-CDS-D-herbacea_M_contig996:1170..1216Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig996 1171..1216 -
1690880722.8723226-CDS-D-herbacea_M_contig996:1170..12161690880722.8723226-CDS-D-herbacea_M_contig996:1170..1216Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig996 1171..1216 -
1622935827.7047582-CDS-D-herbacea_M_contig996:1342..15911622935827.7047582-CDS-D-herbacea_M_contig996:1342..1591Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig996 1343..1591 -
1690880722.8873553-CDS-D-herbacea_M_contig996:1342..15911690880722.8873553-CDS-D-herbacea_M_contig996:1342..1591Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig996 1343..1591 -
1622935827.7190604-CDS-D-herbacea_M_contig996:1669..19591622935827.7190604-CDS-D-herbacea_M_contig996:1669..1959Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig996 1670..1959 -
1690880722.897784-CDS-D-herbacea_M_contig996:1669..19591690880722.897784-CDS-D-herbacea_M_contig996:1669..1959Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig996 1670..1959 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_M_contig996.16270.1

>prot_D-herbacea_M_contig996.16270.1 ID=prot_D-herbacea_M_contig996.16270.1|Name=mRNA_D-herbacea_M_contig996.16270.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=296bp
LGSDSKRPIQDVITRWWSTFQMVVRLLELREPIEKHEEADKLEQMLTAAD
WAVLGMIRPVLEPFMHCKLLLGGRKYVTGSFVVPVIHDLRINLEEVMAPH
NDSINRCGHGDNMLTYTEGNRRQPHGFKSVQVLATAVDPRIKHLYGISED
QHADVWKLVQTEAVNMVLQTRQENNSRVGGNSGADDSTTSLIAKTMYEEK
GKTGGNDGGNDDIDHGEDGSDEKQDEERSSRVYLDPLEWWRVNSADFPHL
AILARRVLAIPATKVESECLFSCAGNIVTKTRNRLAPSTVELLVLL
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mRNA from alignment at D-herbacea_M_contig996:823..1959-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_M_contig996.16270.1 ID=mRNA_D-herbacea_M_contig996.16270.1|Name=mRNA_D-herbacea_M_contig996.16270.1|organism=Desmarestia herbacea DmunM male|type=mRNA|length=1137bp|location=Sequence derived from alignment at D-herbacea_M_contig996:823..1959- (Desmarestia herbacea DmunM male)
CTTGGTTCAGACAGCAAGAGGCCGATCCAAGACGTGATAACTAGGTGGTG GTCCACTTTCCAAATGGTGGTGCGACTGTTGGAGTTGAGGGAACCAATCG AAAAGCATGAGGAGGCTGACAAGTTGGAGCAGATGCTGACGGCGGCGGAC TGGGCAGTTCTCGGGATGATTCGTCCTGTCCTAGAACCGTTCATGCACTG CAAACTTCTGCTGGGGGGTCGCAAGTACGTGACGGGAAGCTTCGTGGTGC CCGTCATCCACGACCTCCGCATCAACCTCGAGGAAGTGATGTTCGACCTC CAAACTGTGCCGGCCAGTGACGACGACGACGTCAACAAGGCAAGGGCGGC GGTGATGCCGTGCGTCAGGGCGCCCCACAATGATTCCATCAACAGGTGCG GACACGGAGACAACATGCTGACCTACACGGAAGGCAACAGGAGGCAGCCA CACGGCTTCAAGTCTGTACAGGTGCTCGCAACCGCTGTTGATCCGCGCAT CAAGCACTTGTACGGGATCTCGGAGGACCAGCATGCCGACGTGTGGAAGC TCGTGCAGACAGAAGCGGTGAATATGGTGCTGCAGACCCGCCAGGAGAAC AACTCCAGGGTTGGCGGGTCGCCATCGAGGGCAGCCGCGGGATCCACGGC TGCTGGAAGGGGTGCCGACTCGTGAAAACGCCCGCATGCTGGTGGCTTCA TGGCAGCGGCACAGTCGGCAAGAAAAGCATCGGCCCAGCAGAGGAACAGC GGCGCCGATGACTCAACGACCTCTCTCATCGCCAAGACGGTGCGGCTTGG GGCAGAGGCCTTCGAGGCGGCCTTATGTTTGCAGATGTACGAGGAGAAGG GGAAAACGGGTGGGAACGACGGGGGGAATGATGACATCGATCATGGAGAA GATGGCAGCGACGAGAAACAAGATGAGGAGAGGAGCTCCAGGGTTTATCT CGACCCTTTGGAATGGTGGCGGGTGAATAGCGCCGACTTCCCGCACTTGG CTATCCTCGCCCGCCGTGTGCTCGCCATCCCCGCCACAAAGGTGGAGTCG GAGTGCCTGTTCTCCTGCGCTGGAAACATCGTGACCAAGACTCGCAACAG GCTGGCCCCAAGCACCGTCGAGCTGCTTGTTCTCCTG
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Coding sequence (CDS) from alignment at D-herbacea_M_contig996:823..1959-

>mRNA_D-herbacea_M_contig996.16270.1 ID=mRNA_D-herbacea_M_contig996.16270.1|Name=mRNA_D-herbacea_M_contig996.16270.1|organism=Desmarestia herbacea DmunM male|type=CDS|length=1776bp|location=Sequence derived from alignment at D-herbacea_M_contig996:823..1959- (Desmarestia herbacea DmunM male)
CTTGGTTCAGACAGCAAGAGGCCGATCCAAGACGTGATAACTAGGTGGTG
GTCCACTTTCCAAATGGTGGTGCGACTGTTGGAGTTGAGGGAACCAATCG
AAAAGCATGAGGAGGCTGACAAGTTGGAGCAGATGCTGACGGCGGCGGAC
TGGGCAGTTCTCGGGATGATTCGTCCTGTCCTAGAACCGTTCATGCACTG
CAAACTTCTGCTGGGGGGTCGCAAGTACGTGACGGGAAGCTTCGTGGTGC
CCGTCATCCACGACCTCCGCATCAACCTCGAGGAAGTGATCTTGGTTCAG
ACAGCAAGAGGCCGATCCAAGACGTGATAACTAGGTGGTGGTCCACTTTC
CAAATGGTGGTGCGACTGTTGGAGTTGAGGGAACCAATCGAAAAGCATGA
GGAGGCTGACAAGTTGGAGCAGATGCTGACGGCGGCGGACTGGGCAGTTC
TCGGGATGATTCGTCCTGTCCTAGAACCGTTCATGCACTGCAAACTTCTG
CTGGGGGGTCGCAAGTACGTGACGGGAAGCTTCGTGGTGCCCGTCATCCA
CGACCTCCGCATCAACCTCGAGGAAGTGATGGCGCCCCACAATGATTCCA
TCAACAGGTGCGGACACGGAGACAACATGCTGACCTACACGGAAGGCAAC
AGGAGGCAGCCACACGGCTTCAAGTCTGTACAGGTGCTCGCAACCGCTGT
TGATCCGCGCATCAAGCACTTGTACGGGATCTCGGAGGACCAGCATGCCG
ACGTGTGGAAGCTCGTGCAGACAGAAGCGGTGAATATGGTGCTGCAGACC
CGCCAGGAGAACAACTCCAGGGTTGGCGGGGCGCCCCACAATGATTCCAT
CAACAGGTGCGGACACGGAGACAACATGCTGACCTACACGGAAGGCAACA
GGAGGCAGCCACACGGCTTCAAGTCTGTACAGGTGCTCGCAACCGCTGTT
GATCCGCGCATCAAGCACTTGTACGGGATCTCGGAGGACCAGCATGCCGA
CGTGTGGAAGCTCGTGCAGACAGAAGCGGTGAATATGGTGCTGCAGACCC
GCCAGGAGAACAACTCCAGGGTTGGCGGGAACAGCGGCGCCGATGACTCA
ACGACCTCTCTCATCGCCAAGACGGAACAGCGGCGCCGATGACTCAACGA
CCTCTCTCATCGCCAAGACGATGTACGAGGAGAAGGGGAAAACGGGTGGG
AACGACGGGGGGAATGATGACATCGATCATGGAGAAGATGGCAGCGACGA
GAAACAAGATGAGGAGAGGAGCTCCAGGGTTTATCTCGACCCTTTGGAAT
GGTGGCGGGTGAATAGCGCCGACTTCCCGCACTTGGCTATCCTCGCCCGC
CGTGTGCTCGCCATCCCCGCCACAAAGGTGGAGTCGGAGTGCCTGTTCTC
CTGCGCTGGAAACATCGTGACCAAGACTCGCAACAGGCTGGCCCCAAGCA
CCGTCGAGCTGCTTGTTCTCCTGATGTACGAGGAGAAGGGGAAAACGGGT
GGGAACGACGGGGGGAATGATGACATCGATCATGGAGAAGATGGCAGCGA
CGAGAAACAAGATGAGGAGAGGAGCTCCAGGGTTTATCTCGACCCTTTGG
AATGGTGGCGGGTGAATAGCGCCGACTTCCCGCACTTGGCTATCCTCGCC
CGCCGTGTGCTCGCCATCCCCGCCACAAAGGTGGAGTCGGAGTGCCTGTT
CTCCTGCGCTGGAAACATCGTGACCAAGACTCGCAACAGGCTGGCCCCAA
GCACCGTCGAGCTGCTTGTTCTCCTG
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