mRNA_D-herbacea_M_contig965.16091.1 (mRNA) Desmarestia herbacea DmunM male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_M_contig965.16091.1
Unique NamemRNA_D-herbacea_M_contig965.16091.1
TypemRNA
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig965.16091.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig965contigD-herbacea_M_contig965:5709..7000 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size222
Cds size219
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935792.6951098-CDS-D-herbacea_M_contig965:5708..58751622935792.6951098-CDS-D-herbacea_M_contig965:5708..5875Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig965 5709..5875 +
1690880706.361782-CDS-D-herbacea_M_contig965:5708..58751690880706.361782-CDS-D-herbacea_M_contig965:5708..5875Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig965 5709..5875 +
1622935792.7097147-CDS-D-herbacea_M_contig965:6946..69981622935792.7097147-CDS-D-herbacea_M_contig965:6946..6998Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig965 6947..6998 +
1690880706.375482-CDS-D-herbacea_M_contig965:6946..69981690880706.375482-CDS-D-herbacea_M_contig965:6946..6998Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig965 6947..6998 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig965.16091.1prot_D-herbacea_M_contig965.16091.1Desmarestia herbacea DmunM malepolypeptideD-herbacea_M_contig965 5709..6998 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_M_contig965.16091.1

>prot_D-herbacea_M_contig965.16091.1 ID=prot_D-herbacea_M_contig965.16091.1|Name=mRNA_D-herbacea_M_contig965.16091.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=73bp
CVLRVSNREAHNSQSCTRLYSKRLRVQVLQSAVLPACDLGFNRSPANNNR
SAAIIRARRCRPQRQKMDKYGAQ
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mRNA from alignment at D-herbacea_M_contig965:5709..7000+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_M_contig965.16091.1 ID=mRNA_D-herbacea_M_contig965.16091.1|Name=mRNA_D-herbacea_M_contig965.16091.1|organism=Desmarestia herbacea DmunM male|type=mRNA|length=1292bp|location=Sequence derived from alignment at D-herbacea_M_contig965:5709..7000+ (Desmarestia herbacea DmunM male)
TGCGTTCTTCGCGTCAGCAACCGAGAAGCGCACAACAGCCAGAGCTGCAC
ACGGCTATACTCCAAACGGCTACGAGTACAAGTACTCCAAAGCGCTGTAC
TGCCGGCTTGCGACCTCGGATTCAATAGGAGCCCCGCGAACAACAACAGG
AGTGCAGCGATCATCAGGTGACAGCCCCGCAACAGTCGACAGTAGTAGTG
CAACAGTACTAGCGGTTAGCAGTATACACCAGTTGCTGTCAGCAGTATTT
GCAGTCATGTCTGATCAGTACTAGCGGTTAGCAGTATACAGCAGTTAGTT
GCGGTCAGCAGTGTTTGCAGTTATGTCTGGTCGATTCGGCTGCGTAGTGG
GTATCGTCTTCATTTTTTCATGATCTACAATTTTGCTCATTTCTATGATT
CATTGCAATTCGTTTAAAGTCGACGAGGGAAGAAAGTGCTGCACTCTTCT
CGCGATAAAAATGTAGGCACGTACCGTAGTGGGAAGGTAGGGAGGAGCGC
CTGCTATGATATGTGACCCCGGATTTGAGTTACGAAGAGAGATGGAGCTA
GAGACAGAATCGGGCGAAGATAATAAATGGGACGGAAAAAAAAAAAAAAT
GTAATTTGGTGCATGGTGTACAGAGTTTCCGCCGGCCATGCCATGCACAT
GATACTGAGTCTGTTCGCCTTCCGATGACTGTCGCATGCATATTGCTGAC
TTTTGGAAGCAATGAGTTGGGTTAACTACGCACTTCGTCATGATCCGTGC
ACCAGTATTGATCTGCTGCCTTGTCCCCAGCCACACGAGCCACACCGCGT
CTGTCTGTGTCGCTAGTAAAATTTTATTTGCAACCCCCCCCCCCAACCCA
CCCATATTTGTTTTTTAGGCTGAAGTCGACATGATGTTCTGACTCACCGT
CTCAGCATTACTTGCACTGTTATTTTCAACATAGATAGGCAGAGTCATGG
GGCGAAAACAGTAGTTGGTCTGCCGTGAGGTCCCTATGTTTTGTACCCGC
TGATGAACCGCGAGTGAAAAAGGCGGGCTCGCAGATTCATGTTTGCCACG
ATACTGTTCTACCCTCTCGCCCCCCCGTAACACCATTTTTAGGCTTAAAT
GTAAACCTGGTCTCCGTGTTGCTGCACTGCAAGAATGGCGACCGATTTGT
AGATTCAGATTGTGACATAACCGTTCGTTTCTTGACTGTGCCGGCGAAAT
ACATGTGCCGGTGATGTCTCCACCACAAAAACGGGCAGAGCAAGACGCTG
CCGACCGCAAAGACAAAAGATGGACAAATACGGAGCGCAGCA
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Coding sequence (CDS) from alignment at D-herbacea_M_contig965:5709..7000+

>mRNA_D-herbacea_M_contig965.16091.1 ID=mRNA_D-herbacea_M_contig965.16091.1|Name=mRNA_D-herbacea_M_contig965.16091.1|organism=Desmarestia herbacea DmunM male|type=CDS|length=438bp|location=Sequence derived from alignment at D-herbacea_M_contig965:5709..7000+ (Desmarestia herbacea DmunM male)
TGCGTTCTTCGCGTCAGCAACCGAGAAGCGCACAACAGCCAGAGCTGCAC
ACGGCTATACTCCAAACGGCTACGAGTACAAGTACTCCAAAGCGCTGTAC
TGCCGGCTTGCGACCTCGGATTCAATAGGAGCCCCGCGAACAACAACAGG
AGTGCAGCGATCATCAGTGCGTTCTTCGCGTCAGCAACCGAGAAGCGCAC
AACAGCCAGAGCTGCACACGGCTATACTCCAAACGGCTACGAGTACAAGT
ACTCCAAAGCGCTGTACTGCCGGCTTGCGACCTCGGATTCAATAGGAGCC
CCGCGAACAACAACAGGAGTGCAGCGATCATCAGAGCAAGACGCTGCCGA
CCGCAAAGACAAAAGATGGACAAATACGGAGCGCAGAGCAAGACGCTGCC
GACCGCAAAGACAAAAGATGGACAAATACGGAGCGCAG
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