mRNA_D-herbacea_M_contig95.16018.1 (mRNA) Desmarestia herbacea DmunM male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_M_contig95.16018.1
Unique NamemRNA_D-herbacea_M_contig95.16018.1
TypemRNA
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Homology
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BLAST of mRNA_D-herbacea_M_contig95.16018.1 vs. uniprot
Match: A0A6H5L3G3_9PHAE (Beta_helix domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3G3_9PHAE)

HSP 1 Score: 190 bits (482), Expect = 4.220e-54
Identity = 102/214 (47.66%), Postives = 134/214 (62.62%), Query Frame = 3 
Query:    3 LRFFATNCLVMNNDIRYCGWEDFEFGDSGTNGEGVYIGTASGQWD-DKNGEDLVDVCQRNVVSNNYIETQGSEAVDIKEGSVQNLVQYNEVYGQVDSESGGISLRGEYNVVRYNSVVEAAGACIRLGGNEVDGREYGKYNEVYDNELFQCAHSAVKINVIPQ-IICGNDVTDPS--NNDDYVRVSGDEADEYPNPERTCPELTAVTFSSSSTPI 632
            LR   TN  V +N I  CG  DF     G NGEGVY+GT+S QWD DKN +D+ DVC  N++  NYI T+G+E +D+KEG+V  L++YNEVY Q D +SGGI  RG+ +++RYN + +  GA +RLGG+ VDG EYGK N+VY N +  C HSAVK+ V PQ  IC NDVT P   + DDY    G+    Y +P + C          + TP+
Sbjct:  174 LRDHVTNAEVYSNHITDCGIYDFREDGDGKNGEGVYVGTSSKQWDSDKNWDDVPDVCMGNIIRGNYIRTRGNEGIDVKEGTVDTLIEYNEVYMQYDDDSGGIGSRGDRSIIRYNHIEDTDGAGVRLGGHTVDGIEYGKNNQVYGNTMVDCRHSAVKVMVDPQGQICNNDVTLPDYVDEDDYKYSGGNF---YYDPLKPCDSSPTPELGPTPTPV 384
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BLAST of mRNA_D-herbacea_M_contig95.16018.1 vs. uniprot
Match: A0A6H5L8H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8H5_9PHAE)

HSP 1 Score: 184 bits (466), Expect = 1.850e-49
Identity = 96/187 (51.34%), Postives = 124/187 (66.31%), Query Frame = 3 
Query:    3 LRFFATNCLVMNNDIRYCGWEDFEFGDSGTNGEGVYIGTASGQWD-DKNGEDLVDVCQRNVVSNNYIETQGSEAVDIKEGSVQNLVQYNEVYGQVDSESGGISLRGEYNVVRYNSVVEAAGACIRLGGNEVDGREYGKYNEVYDNELFQCAHSAVKINVIPQ-IICGNDVTDPSN--NDDYVRVSGD 551
            LR   T   V +N I  CG  D+     G NGEGVY+GT+S QWD D N +D+ DVC  N++ +NYI T+G+E +D+KEGSV  L++YNEVY Q D +SGGI  RG+ +++RYN + +  GA +RLGG+ VDG EYGK N+VY N +  C HSAVK+ V PQ  IC NDVT P +   DDY    GD
Sbjct:  180 LRDHVTYAEVYSNYIIDCGIYDYREDGDGKNGEGVYVGTSSNQWDSDNNWDDVPDVCMGNIIRDNYIRTRGNEGIDVKEGSVDTLIEYNEVYMQYDDDSGGIGSRGDRSIIRYNHIEDTDGAGVRLGGHTVDGIEYGKNNQVYGNTMVDCRHSAVKVMVDPQGQICDNDVTLPDDIDEDDYEYSGGD 366
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BLAST of mRNA_D-herbacea_M_contig95.16018.1 vs. uniprot
Match: A0A6H5JYT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYT7_9PHAE)

HSP 1 Score: 184 bits (466), Expect = 2.000e-49
Identity = 100/214 (46.73%), Postives = 131/214 (61.21%), Query Frame = 3 
Query:    3 LRFFATNCLVMNNDIRYCGWEDFEFGDSGTNGEGVYIGTASGQWD-DKNGEDLVDVCQRNVVSNNYIETQGSEAVDIKEGSVQNLVQYNEVYGQVDSESGGISLRGEYNVVRYNSVVEAAGACIRLGGNEVDGREYGKYNEVYDNELFQCAHSAVKINVIPQ-IICGNDVTDPSN--NDDYVRVSGDEADEYPNPERTCPELTAVTFSSSSTPI 632
            LR   T   V +N I  CG  DF     G NGEGVY+GT+S QWD D N +D+ D C  N++ +NYI T+G+E +D+KEGSV  L++YNEVY Q D +SGGI  RG+ +++RYN + +  GA +RLGG+ VD  EYGK N+VY N +  C HSAVK+ V PQ  IC NDVT P +   DDY    GD    Y +P + C          + TP+
Sbjct:  179 LRDHVTYAEVYSNHITDCGIFDFREDGDGKNGEGVYVGTSSSQWDNDNNWDDVPDACMGNIIRDNYIRTRGNEGIDVKEGSVDTLIEYNEVYMQYDDDSGGIGSRGDRSIIRYNHIEDTDGAGVRLGGHTVDSTEYGKNNQVYGNTMVDCRHSAVKVMVDPQGQICDNDVTLPDDIDEDDYEYSGGDF---YYDPLKPCDSSPTPEPGPTPTPV 389
[Close]
BLAST of mRNA_D-herbacea_M_contig95.16018.1 vs. uniprot
Match: D7FIS5_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIS5_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 1.290e-47
Identity = 96/200 (48.00%), Postives = 127/200 (63.50%), Query Frame = 3 
Query:   45 IRYCGWEDFEFGDSGTNGEGVYIGTASGQWD-DKNGEDLVDVCQRNVVSNNYIETQGSEAVDIKEGSVQNLVQYNEVYGQVDSESGGISLRGEYNVVRYNSVVEAAGACIRLGGNEVDGREYGKYNEVYDNELFQCAHSAVKINVIPQ-IICGNDVTDPSN--NDDYVRVSGDEADEYPNPERTCPELTAVTFSSSSTPI 632
            IR  G  D+     G NGEGVY+GT+S QWD D N +D+ DVC  N++ +NYI T+G+E +D+KEG+V  L++YNEVY Q D +SGGI  RG+ +++RYN + +  GA +RLGG+ VDG EYGK N+VY N +  C  SAVK+ V PQ  IC NDVT P N   DDY    GD    Y +P + C         S+ TP+
Sbjct:   11 IRLRGIYDYREDGDGKNGEGVYVGTSSSQWDNDNNWDDVPDVCMGNIIRDNYIRTRGNEGIDVKEGTVDTLIEYNEVYMQYDDDSGGIGSRGDRSIIRYNYIEDTDGAGVRLGGHTVDGIEYGKNNQVYGNTMVDCRQSAVKVMVDPQGQICDNDVTLPDNVDEDDYEYSGGDF---YYDPLKPCDSSPTPEPGSTPTPV 207
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BLAST of mRNA_D-herbacea_M_contig95.16018.1 vs. uniprot
Match: A0A261GHV7_9GAMM (DUF1565 domain-containing protein n=1 Tax=Hahella sp. CCB-MM4 TaxID=1926491 RepID=A0A261GHV7_9GAMM)

HSP 1 Score: 157 bits (397), Expect = 4.250e-42
Identity = 84/174 (48.28%), Postives = 107/174 (61.49%), Query Frame = 3 
Query:    3 LRFFATNCLVMNNDIRYCGWEDFEFGDSGTNGEGVYIGTASGQWDD-KNGEDLVDVCQRNVVSNNYIETQGSEAVDIKEGSVQNLVQYNEVYGQVDSESGGISLRGEYNVVRYNSVVEAAGACIRLGGNEVDGREYGKYNEVYDNELFQCAHSAVKINVIPQ-IICGNDVTDPS 518
            LR+  T   +  N    CG  DF+F   G NGE +YIGT+S QWDD KN     D    N V +NY  T+G+E VDIKEG+  NLV+ N   GQ D  SGG   RG+YN++RYN      GA IR+GGN V+GR+YG +NEVY N++F   +S +KI   PQ  +CGN +TD S
Sbjct:  182 LRYHVTRAEIFGNTFYNCGAYDFQFDGRGKNGEAIYIGTSSEQWDDGKNPSADPDHSNYNWVHHNYFLTRGNECVDIKEGAAHNLVENNICAGQQDPASGGFDARGDYNIIRYNVSYSNKGAGIRVGGNMVNGRQYGVFNEVYGNKIFDNDNSGIKIMTYPQRYVCGNSMTDNS 355
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BLAST of mRNA_D-herbacea_M_contig95.16018.1 vs. uniprot
Match: A0A1G2MDL9_9BACT (F5/8 type C domain-containing protein n=1 Tax=Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_02_49_25 TaxID=1802305 RepID=A0A1G2MDL9_9BACT)

HSP 1 Score: 155 bits (393), Expect = 2.940e-40
Identity = 91/222 (40.99%), Postives = 126/222 (56.76%), Query Frame = 3 
Query:    3 LRFFATNCLVMNNDIRYCGWEDFEFGDSGTNGEGVYIGTASGQWDD-KNGEDLVDVCQRNVVSNNYIETQGSEAVDIKEGSVQNLVQYNEVYGQVDSESGGISLRGEYNVVRYNSVVEAAGACIRLGGNEVDGREYGKYNEVYDNELFQCAHSAVKINVIPQ-IICGNDVTDPSNNDDYVRVSGDEADEYP------------NPERTCPELTAVTFSSSST 626
            LR+FAT   +  N I  CG  DF F   G NGEG+YIGT++ QW D KN  +  D  + N+V +NYI+TQG+E +DIKEG+  N+++YN   GQ DSESGG   RG+ N+ RYN V  + G  IRLGG  V+G +YGK N+VY+N +    +  ++    PQ  ICGN ++  +  D     +G  A E+             N + T P ++    SS ST
Sbjct:   13 LRYFATKSEIAYNTIANCGAYDFLFNAGGKNGEGIYIGTSNKQWGDGKNPTNDPDETKDNLVHHNYIDTQGNECIDIKEGATANIIEYNTCRGQKDSESGGFDSRGDGNIFRYNDVRGSVGGGIRLGGASVNGIQYGKNNDVYENTIVDNKNGGIRFQTTPQGKICGNTMSGNTTGDS----AGGFASEFDPIKSCDNNMPPGNADTTAPSVSFAEISSGST 230
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BLAST of mRNA_D-herbacea_M_contig95.16018.1 vs. uniprot
Match: UPI00036AEC55 (right-handed parallel beta-helix repeat-containing protein n=1 Tax=Hahella ganghwensis TaxID=286420 RepID=UPI00036AEC55)

HSP 1 Score: 152 bits (383), Expect = 3.910e-40
Identity = 85/197 (43.15%), Postives = 115/197 (58.38%), Query Frame = 3 
Query:    3 LRFFATNCLVMNNDIRYCGWEDFEFGDSGTNGEGVYIGTASGQWDD-KNGEDLVDVCQRNVVSNNYIETQGSEAVDIKEGSVQNLVQYNEVYGQVDSESGGISLRGEYNVVRYNSVVEAAGACIRLGGNEVDGREYGKYNEVYDNELFQCAHSAVKINVIPQI-ICGNDVTDPSNNDDYVRVSGDEADEYPNPERTC 587
            LR++ T   + +N    CG  DF+F + G NGE +Y+GT+S QWDD KN     D    N + +N   T G+E VDIKEG+  NLV+YN   GQ D  S G   RG++N+ RYN   +  GA +RLGGN VDGR+YG  N+VY N L+  A + VK+   PQ  +CGN  +D +  D    + G  A  Y +PE +C
Sbjct:  176 LRYYVTEAEIFDNTFYNCGVYDFKFNNGGKNGEAIYVGTSSNQWDDGKNPTGGPDPSNHNWIHHNKFLTNGNECVDIKEGAEYNLVEYNICSGQQDPNSAGFDSRGDHNIFRYNVSHDNKGAGVRLGGNTVDGRQYGVNNQVYGNLLYNNAQAGVKLMAAPQEKVCGNPTSDNTEGD----IMGSSAMSY-DPELSC 367
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BLAST of mRNA_D-herbacea_M_contig95.16018.1 vs. uniprot
Match: A0A0G0AZ49_9BACT (Secreted protein n=1 Tax=Parcubacteria group bacterium GW2011_GWC2_32_10 TaxID=1618918 RepID=A0A0G0AZ49_9BACT)

HSP 1 Score: 150 bits (378), Expect = 5.920e-38
Identity = 82/167 (49.10%), Postives = 103/167 (61.68%), Query Frame = 3 
Query:    3 LRFFATNCLVMNNDIRYCGWEDFEFGDSGTNGEGVYIGTASGQWDDKNGEDLVDVCQRNVVSNNYIETQGSEAVDIKEGSVQNLVQYNEVYGQVDSESGGISLRGEYNVVRYNSVVEAAGACIRLGGNEVDGREYGKYNEVYDNELFQCAHSAVKINVIPQ-IICGN 500
            L++FA N  + NN I+ CG  DF+F   G NGEG+YIGTA  Q   KN    +D    N + NN I+T G+E VDIKEGS  N+V+YN + GQ DSESGG+  RG+ N+ RYN V E+ GA IR GG+   G +YGK N  Y N++      A KI   PQ  ICGN
Sbjct:  188 LKYFAQNNEIANNVIQNCGIYDFKFSAGGKNGEGIYIGTAPEQLS-KNPTLDIDKSNNNYIHNNSIQTNGNEGVDIKEGSTGNIVEYNIIRGQKDSESGGLDSRGDSNIFRYNDVAESLGAGIRFGGDNYKGVQYGKNNIAYGNKITNNKFGAFKIQATPQGNICGN 353
[Close]
BLAST of mRNA_D-herbacea_M_contig95.16018.1 vs. uniprot
Match: D7G3L7_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3L7_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 5.740e-37
Identity = 74/170 (43.53%), Postives = 104/170 (61.18%), Query Frame = 3 
Query:    3 LRFFATNCLVMNNDIRYCGWEDFEFGDSGTNGEGVYIGTASGQWDD-KNGEDLVDVCQRNVVSNNYIETQGSEAVDIKEGSVQNLVQYNEVYGQVDSESGGISLRGEYNVVRYNSVVEAAGACIRLGGNEVDGREYGKYNEVYDNELFQCAHSAVKINVIPQ-IICGNDV 506
            +R+F T   V NN I  CG  DF       NGEG+Y+GT+S QWDD KN  D  D    N    N+ +TQG+E +DIKEGS  N+V+ N   GQ D  S  +  RG+ N+ R+N+  +  GA IR+GG+++DG +YG+ NEVY+N L    ++ +KI + PQ  +C ND+
Sbjct:  173 MRYFVTYSQVYNNRITNCGTHDFVMDGGSKNGEGIYLGTSSNQWDDGKNPSDEPDESSYNHFFKNHFDTQGNEGIDIKEGSRYNIVEDNYCTGQKDPNSACLDARGDSNIFRFNTCEDNLGAGIRIGGHKIDGHQYGQNNEVYENLLENNDYAGIKITMSPQGAVCSNDI 342
[Close]
BLAST of mRNA_D-herbacea_M_contig95.16018.1 vs. uniprot
Match: D7G5Z6_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Z6_ECTSI)

HSP 1 Score: 141 bits (356), Expect = 9.140e-37
Identity = 71/142 (50.00%), Postives = 99/142 (69.72%), Query Frame = 3 
Query:  111 IGTASGQWDD-KNGEDLVDVCQRNVVSNNYIETQGSEAVDIKEGSVQNLVQYNEVYGQVDSESGGISLRGEYNVVRYNSVVEAAGACIRLGGNEVDGREYGKYNEVYDNELFQCAHSAVKINVIPQ-IICGNDVTDPSNNDD 530
            IGT+S QWDD  N  D  DVCQ   V +N+I T+G+E +++KEG+V+ L++ NEVY Q D+ESGGI  RG+ +++RYN + +  GA +RLGG+ VDG EYG  N+VY+N +  C  S +K+ V PQ  ICGND+  P  +DD
Sbjct:    9 IGTSSTQWDDGDNWSDGPDVCQGITVRDNFIRTKGNEGIEVKEGTVETLIEGNEVYMQYDAESGGIGSRGDRSIIRYNHIEDTDGAGVRLGGHTVDGIEYGANNQVYENTMVNCRASGIKVMVTPQGQICGNDIEVPDTDDD 150
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig95.16018.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L3G3_9PHAE4.220e-5447.66Beta_helix domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5L8H5_9PHAE1.850e-4951.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYT7_9PHAE2.000e-4946.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIS5_ECTSI1.290e-4748.00FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A261GHV7_9GAMM4.250e-4248.28DUF1565 domain-containing protein n=1 Tax=Hahella ... [more]
A0A1G2MDL9_9BACT2.940e-4040.99F5/8 type C domain-containing protein n=1 Tax=Cand... [more]
UPI00036AEC553.910e-4043.15right-handed parallel beta-helix repeat-containing... [more]
A0A0G0AZ49_9BACT5.920e-3849.10Secreted protein n=1 Tax=Parcubacteria group bacte... [more]
D7G3L7_ECTSI5.740e-3743.53FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D7G5Z6_ECTSI9.140e-3750.00FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig95contigD-herbacea_M_contig95:984222..991862 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score144.4
Seed ortholog evalue7.4e-32
Seed eggNOG ortholog1121935.AQXX01000136_gene4114
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Parallel beta-helix repeats
EggNOG OGs1NHJ7@1224,1SHNB@1236,COG3420@1,COG3420@2
COG Functional cat.P
Best tax levelGammaproteobacteria
Best eggNOG OGNA|NA|NA
Exons6
Model size824
Cds size792
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935779.174619-UTR-D-herbacea_M_contig95:984221..9842531622935779.174619-UTR-D-herbacea_M_contig95:984221..984253Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig95 984222..984253 +
1690880700.7260084-UTR-D-herbacea_M_contig95:984221..9842531690880700.7260084-UTR-D-herbacea_M_contig95:984221..984253Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig95 984222..984253 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935779.1989424-CDS-D-herbacea_M_contig95:984253..9843291622935779.1989424-CDS-D-herbacea_M_contig95:984253..984329Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig95 984254..984329 +
1690880700.7376919-CDS-D-herbacea_M_contig95:984253..9843291690880700.7376919-CDS-D-herbacea_M_contig95:984253..984329Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig95 984254..984329 +
1622935779.2162101-CDS-D-herbacea_M_contig95:985481..9855821622935779.2162101-CDS-D-herbacea_M_contig95:985481..985582Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig95 985482..985582 +
1690880700.751601-CDS-D-herbacea_M_contig95:985481..9855821690880700.751601-CDS-D-herbacea_M_contig95:985481..985582Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig95 985482..985582 +
1622935779.229793-CDS-D-herbacea_M_contig95:987315..9874061622935779.229793-CDS-D-herbacea_M_contig95:987315..987406Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig95 987316..987406 +
1690880700.762451-CDS-D-herbacea_M_contig95:987315..9874061690880700.762451-CDS-D-herbacea_M_contig95:987315..987406Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig95 987316..987406 +
1622935779.2471652-CDS-D-herbacea_M_contig95:988219..9883411622935779.2471652-CDS-D-herbacea_M_contig95:988219..988341Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig95 988220..988341 +
1690880700.7732337-CDS-D-herbacea_M_contig95:988219..9883411690880700.7732337-CDS-D-herbacea_M_contig95:988219..988341Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig95 988220..988341 +
1622935779.2635906-CDS-D-herbacea_M_contig95:990007..9901151622935779.2635906-CDS-D-herbacea_M_contig95:990007..990115Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig95 990008..990115 +
1690880700.7840428-CDS-D-herbacea_M_contig95:990007..9901151690880700.7840428-CDS-D-herbacea_M_contig95:990007..990115Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig95 990008..990115 +
1622935779.2903275-CDS-D-herbacea_M_contig95:991568..9918621622935779.2903275-CDS-D-herbacea_M_contig95:991568..991862Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig95 991569..991862 +
1690880700.7965841-CDS-D-herbacea_M_contig95:991568..9918621690880700.7965841-CDS-D-herbacea_M_contig95:991568..991862Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig95 991569..991862 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig95.16018.1prot_D-herbacea_M_contig95.16018.1Desmarestia herbacea DmunM malepolypeptideD-herbacea_M_contig95 984254..991862 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_M_contig95.16018.1

>prot_D-herbacea_M_contig95.16018.1 ID=prot_D-herbacea_M_contig95.16018.1|Name=mRNA_D-herbacea_M_contig95.16018.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=264bp
MNNDIRYCGWEDFEFGDSGTNGEGVYIGTASGQWDDKNGEDLVDVCQRNV
VSNNYIETQGSEAVDIKEGSVQNLVQYNEVYGQVDSESGGISLRGEYNVV
RYNSVVEAAGACIRLGGNEVDGREYGKYNEVYDNELFQCAHSAVKINVIP
QIICGNDVTDPSNNDDYVRVSGDEADEYPNPERTCPELTAVTFSSSSTPI
FDDDTIDDDNNGSADVVDDDSDDAVVVSDDGDESDDSSSGGGYSFVGCFA
DNDSNRVLVFAFDD
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mRNA from alignment at D-herbacea_M_contig95:984222..991862+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_M_contig95.16018.1 ID=mRNA_D-herbacea_M_contig95.16018.1|Name=mRNA_D-herbacea_M_contig95.16018.1|organism=Desmarestia herbacea DmunM male|type=mRNA|length=7641bp|location=Sequence derived from alignment at D-herbacea_M_contig95:984222..991862+ (Desmarestia herbacea DmunM male)
GGCTGCGGTTCTTCGCGACTAACTGCCTCGTGATGAACAACGACATACGC
TACTGCGGCTGGGAGGACTTCGAGTTCGGGGATAGCGGCACCAACGGCGA
AGGCGTATGTGAGAGACGTTTGTGTATGTGAATGGGGGGGGGAGGGGCAG
CACTCATTTGCTGCTTTGCCTTTAGTCAGTTTTGACACCATTGACCAGGC
ATCCCGTTCGAGACGGCGGCAGCAGCACCGTTCCCACTCCTAACAGAGAC
ACCTCTTATCATTCGGGAGTGGTGTACTCTTTTGTTGCTTGCCTCAGTGT
TATTGCCACCCTTTTCGAGACGGGGCACCGACCGTTCCTACTCTCTAATA
GAAACGCCTCCAAACGTTGGGGGGGGGGGGGGGGGGGGGCGTACCTATTT
GCTGCGTACTCATTTGCTGCTTGCCTTAGTTAATTGACCATCGACCATAC
GCGCTCGACTCGAGACGGAGCACCTTTCCCGCTCCTCAGGTGTTGGTTTT
TATTATACTAATATTACATGTACTGTACGAAGGCGGGCTATTCAGCATTT
CGGAACAATTTCTAGAATCATCGCTTAACCTAACGACCACAACATATTAC
ATAACACAACAGCAGGGGGGGGAAAACTTGCCTAAAAGTCCTGTCGATAC
TTGGATATGGTAGGCAGTAGACTTAGCAATGAATGATGAATGATGTTGTA
GGACGGAACTTGACAGTATTTTTACGGAGGTTTTTACTTGCTATTAGTAT
AGGTGTGTTCGTTGGGGTGAGGGTTAGGGTTAGTGGTAGAATTTTCCGAA
ACTGCTTAGGAGCCCACGTTGGTGCTAGTCATACAATAAAAACGAAAAAA
GAAAAGTTCCGTCCCTACAATGTTGTTAAGGCGGCTCTAGATACGTGTGC
TACTGTTGTAATACTGCTCTGCCAGGCAAGGGCACTTGTGTGTGCGTATG
TGTTTTGTTGTTGTCTTACCATGAACAGTCGTCCTCTCTACCGTATGACA
TCCAGTAGCAGCGTATTTAGAGTCTGAACTGATTCTTCCATCCTACAGAG
AGAGATACGAAATTCCGTGGTCACAAGCTAGTACTTACTACAGTAGCACC
AAATGGAAAATTGAATGATATAACGGGGGGGGAAATATGTGTGTGTGTGT
ATGTGACGATAGTGGATGGCGACCTGACCCAAGAAGTCCCTTCTTGGGCA
CCGCCTTCGGCTTCCGCCTCCCTTCGGTTGTCCTGTCTGTGTTTGTGGTT
TTTTGTACAGACATTGGGACGGCGAGTGGCCAGTGGGACGACAAGAATGG
AGAGGACTTGGTCGACGTCTGTCAAAGAAACGTGGTCTCGAACAACTACA
TCGAGACACAGGTTTGTTCGATAGGTTTACTCTGTGGGTTGGTTGATTCA
TTCGTAGCTGGATATATACTTTTCATTATTTTCGTTGTTAATCATGTCCA
GGCTCTACTTCCTTTGTATTGATAATTGCGCGGTAATGTTTTGCCCCACT
ATCTTGGTTAGTATTACAGCTGTACATTACAGCACAGTAATAGTATCTAT
CACGGTGGCCCCTAATAAATAGCCCACAATAAGCCCCAGCACCCACGTTG
GCGCCTGCATCTTAAGAACTGCCACTGCGTTAATCCCGGATCTGATATCG
TTTAAACAACGCGGTTGATCAAAGAAAGGCTTTCCATCGATGCTATAGTT
GTAATATTCAGATAACAATTGGGGGAAGGGTAAGGGCAGACCTTCTCCCG
CCTTCACCCTTTTTCGGGCCTATTTATTAGGGGCCACTGTGGATATATAT
GGTGTCATTTCCTCTAATCATGGCCCAGTGGTCTAATGGCTATGGTATCT
CCTCTGTTGGCGGAAGTTGGGGGTTCGATTCCCGGTGGCACTTTTCTGTG
TCATTTTCCGTCGCGGAAAACGCAAGAAGAGCGTGAGTAAGCACAATTCG
ATGAAAGTCGACGAGGGAAGAAAGTGCTGCACTCTTCTCGCGATAAAAAT
GTAGGCACGTACCGTAGTGGGAAGGAGGTAGGAGCGCCTACTATGTGACC
CCGGATCTGAGTTACGAAGAGAGATGCAGCTAGAAAAAGACTAGGGCGAA
GATAATAAATGGGACGAAAACAACAACAACAACAATGACCATGGTAATCA
GTGACGGAGGAGCGATAATCAAGCATATGCATACATACACCATTGGTTAT
GATTGATTGATTGATTGATTGCGTTGGTTGTTGCATGGCGACGCGTTTTT
TACTCCCAGGGTGTTTTTGTCTAACCCTAACCCTTGTGTGCACATACAAT
AGTTGAAATGAATGAACTCTTGCTGCTGATACCGCTTGCGTGAGCGTTTT
GAGTAAGCGTACGAAAAACATTGCCCAAACGACGGGTACACACAGTTTTG
AAGTTAAGCTCTGTTCCCTATTATTATTCCATTTTTTTTTTTTTTCCCCG
TCCCATTTATTATCTTCGCTCTATTCTTTCTCTAGCTCCATCTCTCTTCG
TAACTCAGATCTGGGGTCACATAGCAGGCGCTCCTCCCACCTTCCCACTA
CGGTACGTGCCTGCATTTTTATCGCGAGAAGACTGCAGCACTTTCTTCCC
TCGTCGACATTTTCATCGAATTGTGCTTTCTCACCCTCTTGTCGCGTTTT
CCGCGACGGAAGATGGCACAGAAAGGTGCCACCGGGAATCGAACCCCCAA
CTTCCGCCAACAGAGGCGAACACCCTAACCACTAGACCATTGCGCCACCC
CTGTGAATGTGTGGGTTATTTTACCATCACACCATCATGAAAGACAAGGA
TAATCCAACGTGGTTTATTTTATTTATTTTTTTTCCAACTTTTGTTGCTA
ATGTTGCTTTGCCATTTCACACGATGCGGTCTTGTTTCGAGGTCTGTTTA
CCAGTTAGACGACGAAAGCTATGGTTGACACAGCTTCTTTTTGTTGATGT
ATATTTGTTGACCCAACCCTAACCCTAGCCACCCACGGTACTATAAATTC
TAGAAAACTCCTGGAATTTGTTTACATAGAGTTTGTATGGTCAACCATAG
TTTTCGTCTAAGTGGTAAATCACTACTACTACTGCTTGTTTCAGGGAAGC
GAAGCCGTCGATATCAAGGAAGGTTCGGTGCAGAATCTGGTGCAGTACAA
CGAAGTCTACGGGCAGGTGGACTCGGAGTCAGGCGGTAAGTTATTTTGGC
ACCAACCACCTCGAGAGGTTAAGGAAATCGCCCTAACTAACAAAGTACGC
CTGTGTTAAAAAAAAAAAATGGGGTTGATTGCGAAAAAAATTACCTCGTA
CTGTGGCATTCCATTGGCCAAACAAGATTCCTTATGATAGGAGCTTTCAA
GGTTTCTTTTAGGGGGGGGCATGGGGTTGTGGTTCCAGCGGGTTTGGGTA
CGGGTTAGGATTAGAGTTAAAGAGTTTTTCAACCATTGTTTTAGGACAGA
ATAATTTACGCAAGTCGCTAAAGACAACGATGGTTGACAGCTGTAAATAT
GCAGTCTGCACTTCCAGGTAGTTGAATACTGTATTAAAACGTTTTTAAAG
GGATCTCGGATACTTTTATTATAATATATGTTGACAGTATAGGAGACGTT
GTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT
TGTTGTCTTCACATAAAAAGTCGCCCATTCCACCCTACGACATCCTGTAG
CGTACTCAAGAGCCTGCCTGTACTGGATCTTTCACCCTAGAAAGAAACGA
AATTCCGTGGTCACAGGCTAACATATCAAAACAAATCGCAAAAAAAAAAA
AAAAAAAAAAACGTGGGTTACAGAAAATGCTAAGTAAGTTTCTTCGAACA
TGATCCTAACCTTGACCTTAACGTGACCTCCCCTGGTACACTACTGACGA
ATGAGTACAGTAATAACATTCTGAGAAATTGATCTCTTTTATGTGAAGAG
TACCAATACGTTTTTTGTGTATGCACACACCCTCTGGCGTCCGTCCAGGC
ATCAGCCTTCGAGGAGAATACAACGTGGTGCGATACAACAGCGTGGTCGA
GGCGGCGGGGGCCTGCATCAGACTAGGCGGCAACGAGGTCGACGGTAGAG
AATACGGAAAATACAACGAGGTGAGCGTTCGGGGGTGAAAAAGTAGAAAG
GGGTACTTTCGGCCGAAGAATATGATTCGTGCCGCATACAAGAGTTTTGA
AGCGGCGACAAGTCAATAGGGGGTAATGGACAAAGCATGGTTAATAGCAT
TGCTGAACAACCGTTTGAGTTTTATTAGTAGTATTTTCTACGTATCGCTT
ATGGTTCAATCCCCGTGTTTACTTCTTAGTTTGCGGTAAGGTTTGGCTGT
GTTAGAGCTCAGTGACTATTATTATTAATAATAGTGCTTTTGGTATAGGG
TTGAGCGATGTTGTGGGGGTGTTCCAGGAGCATGGCAAGAGGATCGTCAA
ATAAAGAAGAGGAATGAAAATCAAAATAAGGCCGCATGGGGTTTATATGT
ATGAGCCGTGCTACGGCAGGGGTTGCACTTCTTTGGGGATCTTGTTTCAC
GAGCTTAGGGCCGTTCGCGCGAGTGGCTACCCTATATCTTTGCGGCCATC
AGCTTTGGTTCAATTTCGTTTCATGATGTGAACCACCACAGACAGGGTTG
AATATTATGCTGGGCGAAAGACTATTTTTGTATGTCCGTTTTTTGGGTGA
GATAGAGAGCCGTTCGCGCGAGTGGCCTAAATCCAGGAGTGAAAATGGGG
GTGCTACCCCTACCGTAGCGACTGGTTTTTACACAGTAGGAGAGGGGGTA
CGTTAGGGTATTTTGCGAGGCTCGTATAATGTACAATCAATAGGATGGCG
AACAAAAAAGCGTATTAAAAGAGGATGGAAGGCGTCAAGATGATGCCGTC
ACCGGGTTTCCTACAGTAGGTCTATACGAGAGGAGAAACAACTAGGGGAT
AGTGTATGCCGGATACAATGAAATGCGCGTGCCCGCATGGTGCCGAGAGG
GAATGAAAGGGGGCACGCTTCAACCATTGCTGTTATTGTCAACCAGTGCT
GCTTTTGTCTTCACATTAAAAAAGCATCCTTTCTACCCTACGACATCCAG
CATACTAGAAGCGTACTCGGAGTCTGTACCGGATCTTCTCCATCCTAGAA
AGACGGCACGAAATTCGGTGGTCACAGGCTACATACACACATGTATATGT
ATATATACATATATATATATATATATATATATATATACATATCACCAAAC
AAATCGCAAAATACACATTTAAGAGAGCATAAACAGCAAAAAAAAAAAAA
AAAACGAGAAGGGAAGAGAGGCAAAAAAGAAGAGCGCTAAAAATGCCACA
TGAAAAACACAGGACACCCCCGTATGTAGTGCTTGTATTGAAAAAAAACA
TGCGAATAGCGGGAATTCCGGGAACAAGTACGGACGGGATCGGCTTGTGT
GTTGGCTTCGGCAAGTAGACGAGGGAGAAGCGTGGGGGGGGGGGGCGGTG
TTGTGAAAACTGTGCAGGTTTAGATTGAGGTGGAGGCGTGCCTGGGCAAG
AAGATAGAAATTGTAGAACCAACCGGGCCTGGGCAACAACGTACGTAGAA
ATGATAAAATCGATCGCCTGGCTGGGAAACCTGTGCAGGGTTTCGAATGC
GTAGTAGTTGGGCGAGATCGTCGTCATTGTAGAAATTTAACGCACACACA
CGTCGAGCCTTGTCCCTCATTTTTTTTTTTTTTGTACAAACGCTCCACTC
CGTTGCCCGCGCATCCGTCCGCCTTTCCGCACGCAGGTGTACGACAACGA
GCTCTTCCAATGCGCGCACTCAGCGGTGAAGATTAACGTGATTCCTCAGA
TAATTTGCGGCAATGATGTCACTGACCCTTCCAACAACGACGACGTAAGT
TTTGTTTTGTTTTTTTTAAGGCTTTTAGTCTAGGCTCTTAGGCTTTTTTT
TTTCTTGTTCTTGTTCCGTCCAGCCTTTTGAATACATGTTTCGCCTAAGT
TGTGGTGACAGCTGAGATGTCTTGCGAATATTGGTATCATATGTACCGAA
GGCGTTCTCGCCAGGATATGGTACAGTGCACGTTCGGCCAATCAGAAACG
CTCAAGAAAGTAACCGTCATTTTTGAGTGGAGGTTTTAGGTGTGTACCAA
TATCTTGGCGAAATCCCTTTACTGTATTTATCTAATTTTTTGTTTATCTG
GTTTTTTTTATCCATGATTAGTGTGCGTTTCGAAGAGTGTGAGATATTTT
GCCATGATTTTGGAAGAAAATTGACGGAAGGTGTGTATGTTCTTACCAAG
CGTTTTTGTCTTTTGCATCTCAAATATTATATTTATTATAAATTTATGTC
TATGTAACATTTCGCATTTTTTGCTGATCTGGTCACATTTTCTCTGGCAG
AGCGTTTTTTTTCTGAAATATTTTTCTGCGTGGCACTCAGAGGGCCCGTC
GGTACATTATCCGCAACGTGAGTGTCTCGCGAGACATCGGTGGCGCGTGT
AATGCCTGCCCAAAGTCGCTGAGACTGGCTATATTTTCAGGGGAAATAGC
CCCAACCCACGAACGCCTCCTGAACTAAACTAGGCGGGCTGTTTTTTTTC
ATACAACACACGTTCACACAGCTCTGCGCTGTGCAGACGTCCACACACGG
CAACACGGTGCAAACCCAAGGATAAGCAGTGGGTACAGCAGCAGTTAGCG
ACAACGCGGCTGCATGGCGCATTATCTTGACTTCATGTCACAGCGTTATG
CCTACGCTACAGAAATAGAAATGGTTGCTGCAGCACAGTTGTTCGGGATA
GAGTTTCGCGTCACGTTCCATGGTCAGCCATACCCCGACCCACCTCCTTC
AAACGTCTGTGATGTCATCTATTACCCGTCCTCTTTCCACTACGCCGCCC
TTCGGTATACGGTGTCTTTCTTAGATCATATTTCAACTGCACTTTTCTGT
GTCACTCTTCGCTCATTTCTGACTTGCGTCACTCCCGGGAGTGCATGTGT
CGAACTCCCGAAGGGGAACCTTGTATGAGAGTACGAGTTCTTTATTGAGC
CGCCATTGTTGTTTTTGTTGTCCAGATATTTAGGATGTTCGTTTTTATTA
GATTTATGATTATTGATAGTAGTACCGTGGGGTGTTACAGCGTTTCGGAA
AATTCTACGGCTGACCCTAACCCGAACCGTAACACACCTACTCTATAATA
ATAGCGAGTCGAAACCTCTCTCAAGTTCCTGTAAATTTCCGTCTAACAAC
AACGCCACGCCTCCTCTATGTATTTGCATGCGTCTCTTTTTGCGCTCGTT
TTGTCGATTTTGTACGTCTTAATTTTGTTGGTTTTTGTTTTCGGCAGTAC
GTAAGGGTTTCGGGAGACGAGGCGGACGAGTACCCGAACCCCGAACGTAC
GTGTCCGGAACTCACAGCTGTAACGTTCTCGTCGTCCTCGACTCCTATCT
TCGATGACGACACCATCGACGACGACAACAATGGAAGTGCGGATGTCGTG
GACGACGATAGTGATGATGCCGTCGTCGTCAGTGATGATGGTGATGAGAG
TGATGACAGCAGCTCTGGAGGAGGGTATAGCTTCGTTGGATGCTTCGCCG
ACAACGACAGCAACAGGGTTTTGGTGTTTGCGTTTGACGAC
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Coding sequence (CDS) from alignment at D-herbacea_M_contig95:984222..991862+

>mRNA_D-herbacea_M_contig95.16018.1 ID=mRNA_D-herbacea_M_contig95.16018.1|Name=mRNA_D-herbacea_M_contig95.16018.1|organism=Desmarestia herbacea DmunM male|type=CDS|length=1584bp|location=Sequence derived from alignment at D-herbacea_M_contig95:984222..991862+ (Desmarestia herbacea DmunM male)
ATGAACAACGACATACGCTACTGCGGCTGGGAGGACTTCGAGTTCGGGGA
TAGCGGCACCAACGGCGAAGGCGTATATGAACAACGACATACGCTACTGC
GGCTGGGAGGACTTCGAGTTCGGGGATAGCGGCACCAACGGCGAAGGCGT
ATACATTGGGACGGCGAGTGGCCAGTGGGACGACAAGAATGGAGAGGACT
TGGTCGACGTCTGTCAAAGAAACGTGGTCTCGAACAACTACATCGAGACA
CAGACATTGGGACGGCGAGTGGCCAGTGGGACGACAAGAATGGAGAGGAC
TTGGTCGACGTCTGTCAAAGAAACGTGGTCTCGAACAACTACATCGAGAC
ACAGGGAAGCGAAGCCGTCGATATCAAGGAAGGTTCGGTGCAGAATCTGG
TGCAGTACAACGAAGTCTACGGGCAGGTGGACTCGGAGTCAGGCGGGAAG
CGAAGCCGTCGATATCAAGGAAGGTTCGGTGCAGAATCTGGTGCAGTACA
ACGAAGTCTACGGGCAGGTGGACTCGGAGTCAGGCGGCATCAGCCTTCGA
GGAGAATACAACGTGGTGCGATACAACAGCGTGGTCGAGGCGGCGGGGGC
CTGCATCAGACTAGGCGGCAACGAGGTCGACGGTAGAGAATACGGAAAAT
ACAACGAGGCATCAGCCTTCGAGGAGAATACAACGTGGTGCGATACAACA
GCGTGGTCGAGGCGGCGGGGGCCTGCATCAGACTAGGCGGCAACGAGGTC
GACGGTAGAGAATACGGAAAATACAACGAGGTGTACGACAACGAGCTCTT
CCAATGCGCGCACTCAGCGGTGAAGATTAACGTGATTCCTCAGATAATTT
GCGGCAATGATGTCACTGACCCTTCCAACAACGACGACGTGTACGACAAC
GAGCTCTTCCAATGCGCGCACTCAGCGGTGAAGATTAACGTGATTCCTCA
GATAATTTGCGGCAATGATGTCACTGACCCTTCCAACAACGACGACTACG
TAAGGGTTTCGGGAGACGAGGCGGACGAGTACCCGAACCCCGAACGTACG
TGTCCGGAACTCACAGCTGTAACGTTCTCGTCGTCCTCGACTCCTATCTT
CGATGACGACACCATCGACGACGACAACAATGGAAGTGCGGATGTCGTGG
ACGACGATAGTGATGATGCCGTCGTCGTCAGTGATGATGGTGATGAGAGT
GATGACAGCAGCTCTGGAGGAGGGTATAGCTTCGTTGGATGCTTCGCCGA
CAACGACAGCAACAGGGTTTTGGTGTTTGCGTTTGACGACTACGTAAGGG
TTTCGGGAGACGAGGCGGACGAGTACCCGAACCCCGAACGTACGTGTCCG
GAACTCACAGCTGTAACGTTCTCGTCGTCCTCGACTCCTATCTTCGATGA
CGACACCATCGACGACGACAACAATGGAAGTGCGGATGTCGTGGACGACG
ATAGTGATGATGCCGTCGTCGTCAGTGATGATGGTGATGAGAGTGATGAC
AGCAGCTCTGGAGGAGGGTATAGCTTCGTTGGATGCTTCGCCGACAACGA
CAGCAACAGGGTTTTGGTGTTTGCGTTTGACGAC
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