prot_D-herbacea_M_contig934.15926.1 (polypeptide) Desmarestia herbacea DmunM male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_M_contig934.15926.1
Unique Nameprot_D-herbacea_M_contig934.15926.1
Typepolypeptide
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Sequence length124
Homology
BLAST of mRNA_D-herbacea_M_contig934.15926.1 vs. uniprot
Match: D8LEP4_ECTSI (ATP-dependent DNA helicase (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP4_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 2.250e-27
Identity = 68/145 (46.90%), Postives = 81/145 (55.86%), Query Frame = 0
Query:    2 GGATVLFGGDWRQVGPVVVSGTPADVVESALISSYLWKHVKRFRLMQSMRDRLDLPYSRTVRAIG-EETPTTNTTCTLDGVT---------------------DFQHLIDFVYPDLLTAEPITFADRGILSPTNVSTDEINNHIL 124
            GG TVL  GD RQ+GPVVV G  A+ V++++ISS LW +V R RL  S RDR D PY+  VR IG    P T T   +D V                       FQ LI+FVYPD+L A+P TF  R ILS TN + D IN HIL
Sbjct:   25 GGKTVLLSGDMRQIGPVVVYGGQAERVDASIISSPLWPYVHRMRLTISQRDREDAPYAAFVRNIGIGAQPHTTTDDGIDAVPLVYIHDIPAMPPDPFVIENTESFQELINFVYPDILHADPTTFKSRAILSSTNDTIDTINEHIL 169          
BLAST of mRNA_D-herbacea_M_contig934.15926.1 vs. uniprot
Match: A0A6H5JVN5_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN5_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 1.310e-19
Identity = 62/144 (43.06%), Postives = 77/144 (53.47%), Query Frame = 0
Query:    1 FGGATVLFGGDWRQVGPVVVSGTPADV-VESALISSYLWKHVKRFRLMQSMRDRLDLPYSRTVRAIGEE-------------TPTTNT--TCTLDG-----VTDFQHLIDFVYPDLLTAEPITFADRGILSPTNVSTDEINNHI 123
            +GG T+ F GDWRQ GPV    TPA+  VE++ ISS LW   KR RL  S RD  D  Y+  VR+IGE+              P +NT  T T D       TDF  LI+FVYPD+   +     DR IL+ TN+S D  N+ I
Sbjct:  157 YGGITICFSGDWRQCGPVAPFATPAETTVEASFISSDLWPKTKRMRLTMSQRDEEDPAYASFVRSIGEKIHPTTTFSDGAKRVPLSNTHDTSTTDHFSLQYTTDFNDLINFVYPDI-HEDARHLNDRAILATTNISIDSCNDAI 299          
BLAST of mRNA_D-herbacea_M_contig934.15926.1 vs. uniprot
Match: UPI000B78261C (ATP-dependent DNA helicase PIF2-like n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B78261C)

HSP 1 Score: 86.3 bits (212), Expect = 1.720e-17
Identity = 55/137 (40.15%), Postives = 78/137 (56.93%), Query Frame = 0
Query:    1 FGGATVLFGGDWRQVGPVVVSGTPADVVESALISSYLWKHVKRFRLMQSMRDRLDLPYSRTVRAIG----EETPTTNTTCTLDGVTDFQ-------HLIDFVYPDLLTAE--PITFADRGILSPTNVSTDEINNHIL 124
            FGG  V+FGGD+RQV PVV   +  + VE++L+SS+LWK+  R RL ++MR R D  +S  + A+G    +ET T N     + +  F+       HLI  V+P+L      P  F D  IL+P N   DEINN ++
Sbjct:  180 FGGKVVVFGGDFRQVLPVVPKKSQKEAVEASLVSSHLWKYFTRIRLSENMRARSDPLFSDFLLALGNGELQETETGNIQIPEELLIPFEEEGISLPHLIKEVFPELSKGHFSPEIFTDHAILTPLNDDVDEINNLLI 316          
BLAST of mRNA_D-herbacea_M_contig934.15926.1 vs. uniprot
Match: UPI001C354555 (Uncharacterized protein n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001C354555)

HSP 1 Score: 84.0 bits (206), Expect = 1.060e-16
Identity = 52/133 (39.10%), Postives = 71/133 (53.38%), Query Frame = 0
Query:    1 FGGATVLFGGDWRQVGPVVVSGTPADVVESALISSYLWKHVKRFRLMQSMRDRLDLPYSRTVRAIGEETPTTNTTCTL-----------DGVTDFQHLIDFVYPDL--LTAEPITFADRGILSPTNVSTDEIN 120
            FGG  V+FGGD+RQV PVV  GT  + V+++L+SSYLW  + +F L ++MR RLD  +S  V  +G   P      T+           D  T   HLID V+ D+   +       +R IL+P N   DEIN
Sbjct:   50 FGGKVVVFGGDFRQVLPVVRKGTRQEHVDASLVSSYLWPTLIKFHLTENMRARLDPAFSEYVLGLGNGMPPITVDETIKIPDGMLVPYEDDCTSLDHLIDVVFHDIHEYSVNISAMMNRAILTPKNSYVDEIN 182          
BLAST of mRNA_D-herbacea_M_contig934.15926.1 vs. uniprot
Match: UPI001C71FD4A (ATP-dependent DNA helicase PIF2-like n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001C71FD4A)

HSP 1 Score: 84.3 bits (207), Expect = 1.210e-16
Identity = 55/133 (41.35%), Postives = 74/133 (55.64%), Query Frame = 0
Query:    1 FGGATVLFGGDWRQVGPVVVSGTPADVVESALISSYLWKHVKRFRLMQSMRDRLDLPYSRTVRAIGEETP---TTNTTCTLDGV--------TDFQHLIDFVYPDL--LTAEPITFADRGILSPTNVSTDEIN 120
            FGG  V+FGGD+RQV PVV  GT  + V+++L+SSYLW  + +F L ++MR RLD  +S  V  +G E P      T   LDG+        T   HLID V+ D+   +       +R IL+P N   DEIN
Sbjct:  240 FGGKVVVFGGDFRQVLPVVRKGTRQEHVDASLVSSYLWPTLIKFHLTENMRARLDPVFSEYVLELGNEMPPITVDETIKILDGMLVPYEDDCTSLDHLIDAVFHDIHEYSINISAMMNRVILTPKNSYVDEIN 372          
BLAST of mRNA_D-herbacea_M_contig934.15926.1 vs. uniprot
Match: UPI001C718C09 (uncharacterized protein LOC122291181 n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001C718C09)

HSP 1 Score: 84.7 bits (208), Expect = 1.250e-16
Identity = 52/133 (39.10%), Postives = 72/133 (54.14%), Query Frame = 0
Query:    1 FGGATVLFGGDWRQVGPVVVSGTPADVVESALISSYLWKHVKRFRLMQSMRDRLDLPYSRTVRAIGEETPTTNTTCTL-----------DGVTDFQHLIDFVYPDL--LTAEPITFADRGILSPTNVSTDEIN 120
            FGG  ++FGGD+RQV PVV  GT  + V+++L+SSYLW  + +F L ++MR RLDL +S  V  +G   P      T+           D  T   HLID V+ D+   +       +R IL+P N   DEIN
Sbjct: 1004 FGGKVIVFGGDFRQVLPVVRKGTRQEHVDASLVSSYLWPTLIKFHLTENMRARLDLVFSEYVLELGNGMPPITVDETIKIPDGMLVSYEDDCTSLDHLIDAVFHDIHEYSINISAMMNRAILTPKNSYVDEIN 1136          
BLAST of mRNA_D-herbacea_M_contig934.15926.1 vs. uniprot
Match: UPI001C345066 (Uncharacterized protein n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001C345066)

HSP 1 Score: 84.3 bits (207), Expect = 1.680e-16
Identity = 55/133 (41.35%), Postives = 74/133 (55.64%), Query Frame = 0
Query:    1 FGGATVLFGGDWRQVGPVVVSGTPADVVESALISSYLWKHVKRFRLMQSMRDRLDLPYSRTVRAIGEETP---TTNTTCTLDGV--------TDFQHLIDFVYPDL--LTAEPITFADRGILSPTNVSTDEIN 120
            FGG  V+FGGD+RQV PVV  GT  + V+++L+SSYLW  + +F L ++MR RLD  +S  V  +G E P      T   LDG+        T   HLID V+ D+   +       +R IL+P N   DEIN
Sbjct:  835 FGGKVVVFGGDFRQVLPVVRKGTRQEHVDASLVSSYLWPTLIKFHLTENMRARLDPVFSEYVLELGNEMPPITVDETIKILDGMLVPYEDDCTSLDHLIDAVFHDIHEYSINISAMMNRVILTPKNSYVDEIN 967          
BLAST of mRNA_D-herbacea_M_contig934.15926.1 vs. uniprot
Match: UPI001C727025 (uncharacterized protein LOC122278387 n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001C727025)

HSP 1 Score: 83.2 bits (204), Expect = 4.240e-16
Identity = 54/133 (40.60%), Postives = 73/133 (54.89%), Query Frame = 0
Query:    1 FGGATVLFGGDWRQVGPVVVSGTPADVVESALISSYLWKHVKRFRLMQSMRDRLDLPYSRTVRAIGEETP---TTNTTCTLDGV--------TDFQHLIDFVYPDL--LTAEPITFADRGILSPTNVSTDEIN 120
            FGG  V+FGGD+RQV PVV  GT  + V+++L+SSYLW  + +F L ++MR RLD  +S  V  +G   P      T   LDG+        T   HLID V+ D+   +       +R IL+P N   DEIN
Sbjct:  404 FGGKVVIFGGDFRQVLPVVHKGTRQEHVDTSLVSSYLWPTLIKFHLTENMRARLDPVFSEYVLELGNGMPPITVDETIKILDGMLVPYEDDCTSLDHLIDAVFHDIHEYSINISAMMNRAILTPKNSYVDEIN 536          
BLAST of mRNA_D-herbacea_M_contig934.15926.1 vs. uniprot
Match: UPI001C726971 (uncharacterized protein LOC122304514 n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001C726971)

HSP 1 Score: 82.8 bits (203), Expect = 4.970e-16
Identity = 54/133 (40.60%), Postives = 73/133 (54.89%), Query Frame = 0
Query:    1 FGGATVLFGGDWRQVGPVVVSGTPADVVESALISSYLWKHVKRFRLMQSMRDRLDLPYSRTVRAIGEETP---TTNTTCTLDGV--------TDFQHLIDFVYPDL--LTAEPITFADRGILSPTNVSTDEIN 120
            FGG  V+FGGD+RQV PVV  GT  + V+++L+SSYLW  + +F L ++MR RLD  +S  V  +G   P      T   LDG+        T   HLID V+ D+   +       +R IL+P N   DEIN
Sbjct:  303 FGGKVVVFGGDFRQVLPVVRKGTRQEHVDASLVSSYLWPTLIKFHLTENMRARLDPVFSEYVLELGNGMPPITVDETIKILDGMLVPYEDDCTSLDHLIDAVFHDIHEYSINISAMMNRAILTPKNSYVDEIN 435          
BLAST of mRNA_D-herbacea_M_contig934.15926.1 vs. uniprot
Match: UPI001C729AA2 (ATP-dependent DNA helicase PIF1-like n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001C729AA2)

HSP 1 Score: 82.8 bits (203), Expect = 5.020e-16
Identity = 54/133 (40.60%), Postives = 73/133 (54.89%), Query Frame = 0
Query:    1 FGGATVLFGGDWRQVGPVVVSGTPADVVESALISSYLWKHVKRFRLMQSMRDRLDLPYSRTVRAIGEETP---TTNTTCTLDGV--------TDFQHLIDFVYPDL--LTAEPITFADRGILSPTNVSTDEIN 120
            FGG  V+FGGD+RQV PVV  GT  + V+++L+SSYLW  + +F L ++MR RLD  +S  V  +G   P      T   LDG+        T   HLID V+ D+   +       +R IL+P N   DEIN
Sbjct:   12 FGGKVVVFGGDFRQVLPVVRKGTRQEHVDASLVSSYLWPTLIKFHLSENMRARLDPIFSEYVLELGNGMPPITVDETIKILDGMLVPYEDDCTSLDHLIDAVFHDIHEYSINISAMMNRAILTPNNSYVDEIN 144          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig934.15926.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEP4_ECTSI2.250e-2746.90ATP-dependent DNA helicase (Fragment) n=1 Tax=Ecto... [more]
A0A6H5JVN5_9PHAE1.310e-1943.06ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
UPI000B78261C1.720e-1740.15ATP-dependent DNA helicase PIF2-like n=1 Tax=Cheno... [more]
UPI001C3545551.060e-1639.10Uncharacterized protein n=1 Tax=Carya illinoinensi... [more]
UPI001C71FD4A1.210e-1641.35ATP-dependent DNA helicase PIF2-like n=1 Tax=Carya... [more]
UPI001C718C091.250e-1639.10uncharacterized protein LOC122291181 n=1 Tax=Carya... [more]
UPI001C3450661.680e-1641.35Uncharacterized protein n=1 Tax=Carya illinoinensi... [more]
UPI001C7270254.240e-1640.60uncharacterized protein LOC122278387 n=1 Tax=Carya... [more]
UPI001C7269714.970e-1640.60uncharacterized protein LOC122304514 n=1 Tax=Carya... [more]
UPI001C729AA25.020e-1640.60ATP-dependent DNA helicase PIF1-like n=1 Tax=Carya... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunM male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010285DNA helicase Pif1-likePFAMPF05970PIF1coord: 1..124
e-value: 9.0E-18
score: 64.6
NoneNo IPR availablePANTHERPTHR10492UNCHARACTERIZEDcoord: 1..56
NoneNo IPR availablePANTHERPTHR10492:SF71coord: 1..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig934contigD-herbacea_M_contig934:29600..30064 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunM male2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig934.15926.1mRNA_D-herbacea_M_contig934.15926.1Desmarestia herbacea DmunM malemRNAD-herbacea_M_contig934 29600..30064 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_M_contig934.15926.1 ID=prot_D-herbacea_M_contig934.15926.1|Name=mRNA_D-herbacea_M_contig934.15926.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=124bp
FGGATVLFGGDWRQVGPVVVSGTPADVVESALISSYLWKHVKRFRLMQSM
RDRLDLPYSRTVRAIGEETPTTNTTCTLDGVTDFQHLIDFVYPDLLTAEP
ITFADRGILSPTNVSTDEINNHIL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010285DNA_helicase_pif1-like