mRNA_D-herbacea_M_contig92.15877.1 (mRNA) Desmarestia herbacea DmunM male
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Overview
Homology
BLAST of mRNA_D-herbacea_M_contig92.15877.1 vs. uniprot
Match: D7G0W9_ECTSI (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0W9_ECTSI) HSP 1 Score: 320 bits (820), Expect = 8.900e-104 Identity = 180/285 (63.16%), Postives = 199/285 (69.82%), Query Frame = 3
Query: 54 MQALRSSVLSQGSLRVVRGGSRGSTGRGWYQRYQRMGPDAFRKARSPDAFDW----AAQQQDCVAEXXXXXXXXXXXXXXXXAFFDLAVDDVPAGRVEFELASDLLPVTCENFLRLCEGGAVAPKQPRALRLHADGVEQEEEEDGIEDEQGT------------LGYEGSKIHRIVSGTGIMGGDVEGAGGARSHSAF-GTRFFPDEAFLIPHTAPGLLTMANSGVHTNGSQFFITVGPAGHLDGRSVAFGRVTSGLEVVRAISGMYGIRGKPVSDIKVDQCGEI 857
MQALR+SVL+QGSL+ VRGG+R STGRGWYQRYQRMGPDAFRKAR+P+ FDW A + AE AFF ++VD VPAGRVEFELASDLLPVT ENFLRLC G VA A L LGY+GS IHR+V+GTGIMGGDVEG GG RSHSAF G RFFPDEAFLIPHTAPGLLTMANSG+HTNGSQF+IT AGHLDGRSVAFGRVT GLEVVRA+ GMY IRGKPVS+I +++CGEI
Sbjct: 1 MQALRTSVLAQGSLQAVRGGTRASTGRGWYQRYQRMGPDAFRKARAPNPFDWDTPLAPPAPEAGAEERQQGGSGRRRPRRR-AFFAMSVDGVPAGRVEFELASDLLPVTSENFLRLCNGVTVASAAGEATLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELGYKGSVIHRVVTGTGIMGGDVEGYGGKRSHSAFSGMRFFPDEAFLIPHTAPGLLTMANSGLHTNGSQFYITTEAAGHLDGRSVAFGRVTKGLEVVRAVYGMYSIRGKPVSEITIEECGEI 284
BLAST of mRNA_D-herbacea_M_contig92.15877.1 vs. uniprot
Match: A0A836C8D9_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8D9_9STRA) HSP 1 Score: 220 bits (561), Expect = 9.990e-66 Identity = 119/265 (44.91%), Postives = 157/265 (59.25%), Query Frame = 3
Query: 54 MQALRSSVLSQGSLRVVRGGSRGSTGRGWYQRYQRMGPDAFRKARSPDAFDWAAQQQDCVAEXXXXXXXXXXXXXXXXAFFDLAVDDVPAGRVEFELASDLLPVTCENFLRLCEGGAVAPKQPRALRLHADGVEQEEEEDGIEDEQGTLGYEGSKIHRIVSGTGIMGGDVEGAGGARSHSAFGTRFFPDEAFLIPHTAPGLLTMANSGVHTNGSQFFITVGPAGHLDGRSVAFGRVTSGLEVVRAISGMYGIRGKPVSDIKVDQC 848
MQA R + + G+LR R +RGS G GWY ++++ G DAF + R P FDW A A+ ++A+ G+VEFELASDLLPVTC+NFL+LC G A P DG L Y+G+ IH + G G+MGGDVEG G +SHS G R+F DE F IPH++ GLLTMANSG+ TNGSQF++T+GPA H+DGRSVAFGRV G++VVR + G++ ++ KPVS + + C
Sbjct: 1 MQAFRVATVVPGALRHTRM-ARGSRGWGWYLKHKQQGDDAFIRDRPPTPFDWDAAPA----------------APRKRAYVEIAIAGENIGKVEFELASDLLPVTCKNFLQLCTGAATGP----------DGA--------------PLTYKGTPIHTLAKGVGLMGGDVEGGNGKKSHSGLGKRYFRDEGFFIPHSSEGLLTMANSGIDTNGSQFYVTIGPAPHMDGRSVAFGRVVGGMDVVRRVFGLFSVKAKPVSKVVITDC 224
BLAST of mRNA_D-herbacea_M_contig92.15877.1 vs. uniprot
Match: W7TUT6_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TUT6_9STRA) HSP 1 Score: 193 bits (490), Expect = 1.150e-54 Identity = 107/266 (40.23%), Postives = 142/266 (53.38%), Query Frame = 3
Query: 114 SRGSTGRGWYQRYQRMGPDAFRKARSPDAFDWAAQQQDCVAEXXXXXXXXXXXXXXXXAFFDLAVDDVPAGRVEFELASDLLPVTCENFLRLCEGGAVAPKQPRALRLHADGVEQEEEEDGIEDEQGTLGYEGSKIHRIVSGTGIMGGDVEGA---------------GGARSHSAFGTRFFPDEAFLIPHTAPGLLTMANSGVHTNGSQFFITVGPAGHLDGRSVAFGRVTSGLEVVRAISGMYGIRGKPVSDIKVDQCGEIEGE 866
SRG GRGWY+ Y+ GP+ F++ R P FDW+ F +++D P GR+ ELA D+LP+ ENF LC+G E G E + LGY GS+IHR+V G GI+GGD+ A GGA +HS G RFFPDE+F IPHT PGLL+M ++G H NGS F I+ HLDGRSV FGRV G+EV+ A++ Y IRG+PV+ ++V++ G +E E
Sbjct: 32 SRGDNGRGWYELYKEAGPEGFKRYRPPTPFDWSPPST---------ATPPSEAPRRSKVFLGISLDKEPLGRIVLELADDILPLAAENFRLLCQGAG--------------------REGGREGGKTGLGYAGSRIHRVVKGAGIVGGDLSTARAPPSSGAIRPRQRQGGAGNHSGLGPRFFPDESFQIPHTGPGLLSMVSAGAHRNGSVFHISTHACPHLDGRSVVFGRVVGGVEVLEAVANTYTIRGRPVAVVRVEEAGVMEAE 268
BLAST of mRNA_D-herbacea_M_contig92.15877.1 vs. uniprot
Match: A0A4D9CP74_9STRA (PPIase cyclophilin-type domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CP74_9STRA) HSP 1 Score: 194 bits (493), Expect = 9.960e-54 Identity = 108/266 (40.60%), Postives = 142/266 (53.38%), Query Frame = 3
Query: 114 SRGSTGRGWYQRYQRMGPDAFRKARSPDAFDWAAQQQDCVAEXXXXXXXXXXXXXXXXAFFDLAVDDVPAGRVEFELASDLLPVTCENFLRLCEGGAVAPKQPRALRLHADGVEQEEEEDGIEDEQGTLGYEGSKIHRIVSGTGIMGGDVEGA---------------GGARSHSAFGTRFFPDEAFLIPHTAPGLLTMANSGVHTNGSQFFITVGPAGHLDGRSVAFGRVTSGLEVVRAISGMYGIRGKPVSDIKVDQCGEIEGE 866
SRG GRGWY+ Y+ GP+ F++ R P FDW+ F L++D P GR+ ELA D+LP+ ENF LC+G E G E + LGY GS+IHR+V G GI+GGD+ A GGA +HS G RFFPDE+F IPHT PGLL+M ++G H NGS F I+ HLDGRSV FGRV G+EV+ A++ Y IRG+PV+ ++V++ G +E E
Sbjct: 147 SRGDNGRGWYELYKEAGPEGFKRYRPPTPFDWSRPSTATTPSEAPRRSK---------VFLGLSLDKEPLGRIVLELADDILPLAAENFRLLCQGAG--------------------REGGREGGKTGLGYAGSRIHRVVKGAGIVGGDLSTARAPPSSGAIRPRQRQGGAGNHSGLGPRFFPDESFQIPHTGPGLLSMVSAGAHRNGSVFHISTHACPHLDGRSVVFGRVVGGVEVLEAVANTYTIRGRPVAVVRVEEAGVMEAE 383
BLAST of mRNA_D-herbacea_M_contig92.15877.1 vs. uniprot
Match: A0A6U1PLG6_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1PLG6_9STRA) HSP 1 Score: 188 bits (477), Expect = 3.220e-53 Identity = 107/263 (40.68%), Postives = 139/263 (52.85%), Query Frame = 3
Query: 63 LRSSVLSQGSLRVVRGGSRGSTGRGWYQRYQRMGPDAFRKARSPDAFDWAAQQQDCVAEXXXXXXXXXXXXXXXXAFFDLAVDDVPAGRVEFELASDLLPVTCENFLRLCEGGAVAPKQPRALRLHADGVEQEEEEDGIEDEQGTLGYEGSKIHRIVSGTGIMGGDVEGAGGARSHSAFGTRFFPDEAFLIPHTAPGLLTMANSGVHTNGSQFFITVGPAGHLDGRSVAFGRVTSGLEVVRAISGMYGIRGKPVSDIKVDQCG 851
R ++ VRG SR + G GWY++Y+ G +AF+K + P FDW + + V +F L +D G ++FELA D+LP TC NF LC G E EQG L Y GS IH IV G G++GGDVE G +HS G R+F DE F+IPH GLL+MA SGVHT SQF++T+ PA H+DGR VAFGR+ SGL+V+ A+ Y RGKP + I + CG
Sbjct: 6 FRGHIIQSPHTFAVRG-SRAAKGWGWYKKYKEGGEEAFKKYQPPTPFDWEDESRSPVINKGIRSRP----------YFQLTIDGEDVGEIQFELADDILPETCSNFKALCTG---------------------------ESEQG-LSYCGSPIHHIVKGVGVIGGDVEKHDGTGNHSGLGKRYFEDEGFVIPHAEGGLLSMATSGVHTCASQFYLTLYPAPHMDGRCVAFGRIISGLDVLEAVYKQYSTRGKPAASILISACG 229
BLAST of mRNA_D-herbacea_M_contig92.15877.1 vs. uniprot
Match: A0A7S2BM91_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BM91_9STRA) HSP 1 Score: 176 bits (446), Expect = 4.200e-48 Identity = 100/254 (39.37%), Postives = 137/254 (53.94%), Query Frame = 3
Query: 90 SLRVVRGGSRGSTGRGWYQRYQRMGPDAFRKARSPDAFDWAAQQQDCVAEXXXXXXXXXXXXXXXXAFFDLAVDDVPAGRVEFELASDLLPVTCENFLRLCEGGAVAPKQPRALRLHADGVEQEEEEDGIEDEQGTLGYEGSKIHRIVSGTGIMGGDVEGAGGARSHSAFGTRFFPDEAFLIPHTAPGLLTMANSGVHTNGSQFFITVGPAGHLDGRSVAFGRVTSGLEVVRAISGMYGIRGKPVSDIKVDQCG 851
+ R + +GS+GRGWY++Y++ G + FRK P FDW+ + + D++VD GRVE EL ++LP+T NF +LC G E DG L Y + IH +V + I+ GDVE G SHSA GTR+F DEA ++PHT G+++M N GV TNGSQF+IT P+ LDG SVAFGRVTSG++VV +I+ ++ IRG PVS + V G
Sbjct: 56 AARAMGTAKQGSSGRGWYKKYEKEGEEGFRKYNPPTPFDWSEAGATSLV------------------YLDVSVDGADPGRVEIELLDEILPITTTNFKKLCTG---------------------ENPDG-------LSYADTPIHHVVKDSAIVAGDVELKTGKGSHSALGTRYFDDEALVMPHTEAGIVSMVNGGVDTNGSQFYITTAPSPQLDGYSVAFGRVTSGMDVVGSITNLFSIRGVPVSTVTVTAAG 263
BLAST of mRNA_D-herbacea_M_contig92.15877.1 vs. uniprot
Match: A0A7S3NRJ3_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NRJ3_9STRA) HSP 1 Score: 163 bits (412), Expect = 3.690e-43 Identity = 100/256 (39.06%), Postives = 135/256 (52.73%), Query Frame = 3
Query: 90 SLRVVRGGSRGSTGRGWYQRYQRMGPDAFRKARSPDAFDWAAQQQDCVAEXXXXXXXXXXXXXXXXAFFDLAVDDVPAGRVEFELASDLLPVTCENFLRLCEGGAVAPKQPRALRLHADGVEQEEEEDGIEDEQGTLGYEGSKIHRIVS-GTGIMGGDVEGAGGARSHSAFGTRFFPDEAFLIPHTAPGLLTMANSGVHTNGSQFFITVGPAGHLDGRSVAFGRVTSGLEVVRA-ISGMYGIRGKPVSDIKVDQCG 851
S R+ R GS G GWY++Y++ GPD+FR+ P FD+ A + + FFD+ V + GR+EFEL +LLPVTCENF LC G A P R Y+GS R+++ G IMGGDV AGG SHSA+ R++ DE F +PH+ G+L+ AN+G+ TNGSQF+IT+ H+DGR VAFGRV +G +V+ I +Y RG P I + G
Sbjct: 34 SQRMKRYTKSGSPGHGWYEKYKKFGPDSFRRWERPKPFDFDAADAQVLGKRTY-------------CFFDIGVAESKVGRIEFELLDELLPVTCENFKLLCSGFA-----PSGFR-----------------------YKGSHFIRLMARGAAIMGGDVATAGG--SHSAWKQRYYADEGFFVPHSQAGILSSANAGIDTNGSQFYITLKECPHMDGRCVAFGRVATGYDVITGLIKDVYMQRGIPTKSITILDAG 246
BLAST of mRNA_D-herbacea_M_contig92.15877.1 vs. uniprot
Match: A0A7S1UAR4_9STRA (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UAR4_9STRA) HSP 1 Score: 158 bits (399), Expect = 9.080e-42 Identity = 91/246 (36.99%), Postives = 125/246 (50.81%), Query Frame = 3
Query: 129 GRGWYQRYQRMGPDAFRKARSPDAFDWAAQQQDCVAEXXXXXXXXXXXXXXXXAFFDLAVDDVPAGRVEFELASDLLPVTCENFLRLCEGGAVAPKQPRALRLHADGVEQEEEEDGIEDEQGTLGYEGSKIHRIVSGTGIMGGDVEGAGGARSHSAFGTRFFPDEAFLIPHTAPGLLTMANSGVHTNGSQFFITVGPAGHLDGRSVAFGRVTSGLEVVRAISGMYGIRGKPVSDIKVDQCGEIEGE 866
G GWY++Y++ GP+ FRK + P FDW + FFD+ VD GR+ E D+LPVT ENF +L A+APK L Y+ S IHRI+ + ++ GDVEG G SHSA G R+F E F +PH+ PG+++M ++ NGSQF+IT+ P HLDGR AFGRV G+++V+ + G + PVSDI + G I E
Sbjct: 28 GTGWYRKYEKEGPEGFRKYKLPTPFDWDSNDPS----------------KRKRVFFDVNVDGESKGRIVVETLDDVLPVTSENFQKL----AMAPKDA------------------------WLTYKNSGIHRIMKTSALVAGDVEGGSGRASHSALGRRYFEHEGFYVPHSEPGIVSMVSNKRDENGSQFYITIEPCPHLDGRCTAFGRVVEGMDLVQELRGTFSRHEIPVSDISFGETGVIGAE 229
BLAST of mRNA_D-herbacea_M_contig92.15877.1 vs. uniprot
Match: F0Y6J0_AURAN (Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6J0_AURAN) HSP 1 Score: 152 bits (383), Expect = 2.420e-40 Identity = 87/192 (45.31%), Postives = 113/192 (58.85%), Query Frame = 3
Query: 291 FFDLAVDDVPAGRVEFELASDLLPVTCENFLRLCEGGAVAPKQPRALRLHADGVEQEEEEDGIEDEQGTLGYEGSKI-HRIVSGTGIMGGDVEGAGGARSHSAF-GTRFFPDEAFLIPHTAPGLLTMANSGVHTNGSQFFITVGPAGHLDGRSVAFGRVTSGLEVVRAISG-MYGIRGKPVSDIKVDQCGEI 857
FFD+AVD AGR+E EL +LLP TCENF LC GA + GY G+ + R+V G G++GG V+ GG SHSAF G R F DE F +PH PGLL+MAN+GV TNGSQF++T A H+DGR VAFGRV +GL+VV+ ++ +Y RG PV +++ CG +
Sbjct: 3 FFDVAVDGEAAGRIELELLDELLPETCENFRLLCGDGAPSG----------------------------FGYAGANLARRVVKGVGLLGGVVDAPGG--SHSAFAGRRVFADEGFFVPHAEPGLLSMANAGVDTNGSQFYLTTAAAPHMDGRCVAFGRVAAGLDVVQTLADTLYTQRGVPVEHVEIAACGTL 164
BLAST of mRNA_D-herbacea_M_contig92.15877.1 vs. uniprot
Match: A0A7S4EDH8_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EDH8_9STRA) HSP 1 Score: 153 bits (386), Expect = 5.400e-40 Identity = 99/251 (39.44%), Postives = 129/251 (51.39%), Query Frame = 3
Query: 120 GSTGRGWYQRYQRMGPDAF-RKARSPDAFDWAAQQQDCVAEXXXXXXXXXXXXXXXXAFFDLAVDDVPAGRVEFELASDLLPVTCENFLRLCEGGAVAPKQPRALRLHADGVEQEEEEDGIEDEQGTLGYEGSKIHRIVSGTGIMGGDVEGAGGARSHSAFGTR-FFPDEAFLIPHTAPGLLTMANSGVHTNGSQFFITVGPAGHLDGRSVAFGRVTSGLEVVRAI-SGMYGIRGKPVSDIKVDQCGEIEG 863
G+ RGWYQRY GP+ F R + ++FDW A + + F +++VD AGR+ EL +LLP T ENF LC G A + G Q T R+V G G++GG + A G S SAF R F DE F +PH PGLLTMA+SGV NGSQF++T+ PA HLDGR VAFGR+ GL+VVR + +Y RG PV + V+ CG ++G
Sbjct: 19 GTHSRGWYQRYAARGPEGFLRPSPGGESFDWDAPEAKTRSR----------------CFLEVSVDGQRAGRLVVELLDELLPETSENFRLLCSGDAPS---------------------GASYAQSTF------ARRVVKGVGLLGGALPDAPGG-SRSAFADRPLFADEGFFVPHAEPGLLTMASSGVDGNGSQFYVTIEPAPHLDGRCVAFGRLVEGLDVVRHLHDSLYTQRGVPVEKVVVEACGVVDG 225 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig92.15877.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_M_contig92.15877.1 >prot_D-herbacea_M_contig92.15877.1 ID=prot_D-herbacea_M_contig92.15877.1|Name=mRNA_D-herbacea_M_contig92.15877.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=272bp MQALRSSVLSQGSLRVVRGGSRGSTGRGWYQRYQRMGPDAFRKARSPDAFback to top mRNA from alignment at D-herbacea_M_contig92:1181919..1185687+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_M_contig92.15877.1 ID=mRNA_D-herbacea_M_contig92.15877.1|Name=mRNA_D-herbacea_M_contig92.15877.1|organism=Desmarestia herbacea DmunM male|type=mRNA|length=3769bp|location=Sequence derived from alignment at D-herbacea_M_contig92:1181919..1185687+ (Desmarestia herbacea DmunM male)back to top Coding sequence (CDS) from alignment at D-herbacea_M_contig92:1181919..1185687+ >mRNA_D-herbacea_M_contig92.15877.1 ID=mRNA_D-herbacea_M_contig92.15877.1|Name=mRNA_D-herbacea_M_contig92.15877.1|organism=Desmarestia herbacea DmunM male|type=CDS|length=1632bp|location=Sequence derived from alignment at D-herbacea_M_contig92:1181919..1185687+ (Desmarestia herbacea DmunM male)back to top |