mRNA_D-herbacea_M_contig92.15837.1 (mRNA) Desmarestia herbacea DmunM male
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Overview
Homology
BLAST of mRNA_D-herbacea_M_contig92.15837.1 vs. uniprot
Match: D7G715_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G715_ECTSI) HSP 1 Score: 145 bits (365), Expect = 1.470e-34 Identity = 80/192 (41.67%), Postives = 119/192 (61.98%), Query Frame = 1
Query: 532 ALRFTNSEQIK--KFARHWGNFAVRQFALSWITHDEVVDYFMSSREGN---LTETAFADLPGWYMLKIYLDDQSRGGGERGESLPDAA-MQTTLEPAKELLLNGYAAMGILEEFN---TLFNAAQKMPGVDWVREFGRIGIKKVNTRVKHEEEEALVAALTSSEIKRYIGLDLLLYEHAVSVFHQQAAMYGL 1080
A F +S + FARHWGNFA+RQFAL +++HD+V D+ +S G LT +PGWYMLK++L+D+S G ++ P+ ++ P +LL + YA +GILE++N +LF++A MPG+ W EF R G V+TR K E+++ L AL+ EI +++ LDL LY AV +F+QQ YG+
Sbjct: 198 ASEFVSSRNVDLVTFARHWGNFALRQFALGFVSHDKVKDFLVSPNGGGAMGLTAEQVELMPGWYMLKLFLNDRS---GVADDTSPEGTRLEYMFRPVVDLLRDNYAVVGILEDWNATLSLFDSALDMPGMTWREEFERSGKLNVDTRFKGEKQDVLQQALSDPEIVKHLSLDLRLYGQAVDIFNQQRHSYGI 386
BLAST of mRNA_D-herbacea_M_contig92.15837.1 vs. uniprot
Match: D7FWQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWQ3_ECTSI) HSP 1 Score: 144 bits (362), Expect = 1.120e-33 Identity = 80/186 (43.01%), Postives = 113/186 (60.75%), Query Frame = 1
Query: 568 FARHWGNFAVRQFALSWITHDEVVDYFMSSREGNLTETAFADLPGWYMLKIYLDDQSRGG-GERGESLP-----------DAAMQTTLEPAKELLLNGYAAMGILEEFNT---LFNAAQKMPGVDWVREFGRIGIKKVNTRVKHEEEEALVAALTSSEIKRYIGLDLLLYEHAVSVFHQQAAMYGL 1080
FA+HWGNFAVRQFAL ++ D V +Y + L + + GWY LK+YL+ +G G G+S +A + L+PA +L+ +GY A+GILE++NT LF+ A ++PG+ W +F G ++V+ + K E E L A T SE+K+Y+ LDLLLYEHAV VFH+QA YGL
Sbjct: 275 FAKHWGNFAVRQFALGFVPSDGVQEYIRTPEAQALHDFDLKKIAGWYQLKMYLERPEKGDWGVPGQSEAMTVEHDAAATLEAPLYDLLQPAMDLIRSGYVAVGILEQWNTTLHLFDHALEIPGMYWGAQFAEGGKQRVDYKNKRLESETLKQAWTDSELKKYMRLDLLLYEHAVDVFHEQARGYGL 460
BLAST of mRNA_D-herbacea_M_contig92.15837.1 vs. uniprot
Match: D7FS84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS84_ECTSI) HSP 1 Score: 132 bits (332), Expect = 7.150e-31 Identity = 77/186 (41.40%), Postives = 107/186 (57.53%), Query Frame = 1
Query: 568 FARHWGNFAVRQFALSWITHDEVVDYFMSSREGNLTETAFA--DLPGWYMLKIYL----DDQSRGGGERGESLPDAA------MQTTLEPAKELLLNGYAAMGILEEFNT---LFNAAQKMPGVDWVREFGRIGIKKVNTRVKHEEEEALVAALTSSEIKRYIGLDLLLYEHAVSVFHQQAAMYGL 1080
FA HWG+F +RQFAL+++ +E++ + + PGWY LK+YL D+Q +G G RG AA + L+P +ELL N YAA+G+LE++ T LFN A MPG DW FG IG K + +EE E L+ + T ++RY+ LDLLLY++AVSV +QQ YGL
Sbjct: 115 FAEHWGDFGLRQFALAFVLPEELLANKVKYDATGICTPYHGKRSCPGWYELKLYLQQQLDEQEQGEGSRGWDGSGAAASGAATISHLLQPVQELLTNEYAAVGVLEQWETSLLLFNEALGMPGFDWPETFGSIGKKNSDGTFHNEEAEMLLRSWTDPRLRRYLSLDLLLYDYAVSVHNQQVDKYGL 300
BLAST of mRNA_D-herbacea_M_contig92.15837.1 vs. uniprot
Match: D7G716_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G716_ECTSI) HSP 1 Score: 125 bits (315), Expect = 2.180e-27 Identity = 76/186 (40.86%), Postives = 103/186 (55.38%), Query Frame = 1
Query: 568 FARHWGNFAVRQFALSWITHDEVVDYFMSSREGNLTETAFADLPGWYMLKIYLD-DQSRGGGERGE-----------SLPDAAMQTTLEPAKELLLNGYAAMGILEEFNT---LFNAAQKMPGVDWVREFGRIGIKKVNTRVKHEEEEALVAALTSSEIKRYIGLDLLLYEHAVSVFHQQAAMYGL 1080
FA+HWGNFA+RQFAL ++ D+V +Y LK+YL+ Q GG G+ + PDA + L+PA +L+ +GY A+GILE++NT LF+ MP ++W +F G V+ K E E L A T SE+K+Y+ LDLLLYEHAV VFHQQA +GL
Sbjct: 296 FAKHWGNFALRQFALGFVPSDDVQEY---------------------QLKMYLERPQKEDGGVLGQREAMTAHQDAAATPDAPLYELLQPAMDLVRDGYVAVGILEQWNTTLRLFDHTLDMPVMNWEEQFAESGKHHVDIVNKQLEIETLQQAWTDSELKKYMRLDLLLYEHAVDVFHQQARSHGL 460
BLAST of mRNA_D-herbacea_M_contig92.15837.1 vs. uniprot
Match: A0A6H5L061_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L061_9PHAE) HSP 1 Score: 107 bits (268), Expect = 6.870e-23 Identity = 63/179 (35.20%), Postives = 101/179 (56.42%), Query Frame = 1
Query: 568 FARHWGNFAVRQFALSWITHDEVVDYFMSSREGNLTETAFADLPGWYMLKIYLDDQSRGGGERG-----ESLPDAAMQTTLEPAKELLLNGYAAMGILEEFNT---LFNAAQKMPGVDWVREFGRIGIKKVNTRVKHEEEEALVAALTSSEIKRYIGLDLLLYEHAVSVFHQQAAMYGL 1080
FA+HWGN+ +RQF+L+++ ++V F + +E + PGWY +K Y ++Q ER + D AM L+P ++LL Y+A+GILE++ T LFN A K+P +W +G K V+ R+ EE AL AA + + + LD+ LY+HAV+V ++Q +G+
Sbjct: 56 FAKHWGNYGLRQFSLAFVGAEDV---FAAEQERGIDGRPVM-FPGWYRVKEYFENQFDVEQERALMQETGASNDLAMSYLLQPVEDLLSRNYSAVGILEKWETSMTLFNKALKVPSFNWQTASRNLGRKNVDKRLHDEEAHALRAAWDDPVLAKTLWLDIFLYDHAVAVHNKQVEEHGI 230
BLAST of mRNA_D-herbacea_M_contig92.15837.1 vs. uniprot
Match: D8LU75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU75_ECTSI) HSP 1 Score: 102 bits (255), Expect = 8.060e-21 Identity = 80/247 (32.39%), Postives = 115/247 (46.56%), Query Frame = 1
Query: 376 SRATSCHGGLPRSSKAHGCRCRRQVQVFHH-----VSTSDPPVGVRLFLLSGESGRFALRFTNSEQIKKFARHWGNFAVRQFALSWITHDEVVDYFMSSREGNLTETAFADLPGWYMLKIYLDDQSRGGGERGESLPDAAMQTTLEPAKELLLNGYAAMGILEEFNT---LFNAAQKMPGVDWVREFGRIGIK---KVNTRVKHEEEEALVAALTSSEIKRYIGLDLLLYEHAVSVFHQQAAMYGLE 1083
SR HGG S + H R + + +F H +S D +G + T S + FA WGNFA+RQFAL+ ++ V ++ +++ T T+ WY++K YL RG D + + LEP K LL YAA+GI +E T LF+ A M G+DW + +GI K ++ E E AL + I + LD+ LYEHAV VF Q A +G+E
Sbjct: 42 SRWKLLHGGCVESLRNHKGRSCKWITIFRHPIARLLSAYDHCLGAPKDPVCPP--------TESTGLAAFAELWGNFAMRQFALAAVSPSAVKEW--AAQRQARTGTSM-----WYLVKEYL--------ARGGIAEDEVLGSKLEPVKGLLSTQYAAVGIAQELKTTMVLFSKALSMEGLDWSSSWATLGINEEDKQDSEYDITESEPFRQALENPRIVSALRLDMSLYEHAVHVFKDQVAQFGIE 265
BLAST of mRNA_D-herbacea_M_contig92.15837.1 vs. uniprot
Match: A0A6H5JY77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY77_9PHAE) HSP 1 Score: 103 bits (257), Expect = 1.740e-20 Identity = 69/185 (37.30%), Postives = 98/185 (52.97%), Query Frame = 1
Query: 568 FARHWGNFAVRQFALSWIT-----HDEVVDYFMSSREGNLTETAFADLPGWYMLKIYL-----DDQSRGGGERGESLPDAAMQTTLEPAKELLLNGYAAMGILEEFNT---LFNAAQKMPGVDWVREFGRIGIKKVN-TRVKHEEEEALVAALTSSEIKRYIGLDLLLYEHAVSVFHQQAAMYGL 1080
FA HWGN+ +RQFAL+ I H+EVV F G+ +P WY K YL DD G + P++ + L A+E L YAA+GI+EE++ LFN + DWV+EF + G K ++ + + AL AA S E+K++I LD+LLY+HA+SV Q A G+
Sbjct: 167 FAEHWGNYGLRQFALASIKAEDVFHNEVVSEFCQQARGH----GDVCIPAWYRQKHYLHLPHQDDFC------GPTQPESGLAQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLRRFDWVKEFQKSGKKNSGGSQFETASKSALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGI 341
BLAST of mRNA_D-herbacea_M_contig92.15837.1 vs. uniprot
Match: A0A6H5JQM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM0_9PHAE) HSP 1 Score: 98.2 bits (243), Expect = 6.490e-18 Identity = 68/189 (35.98%), Postives = 96/189 (50.79%), Query Frame = 1
Query: 544 TNSEQIKKFARHWGNFAVRQFALSWITHDEVVDYFMSSREGNLTETAFADLPGWYMLKIYLDDQSRGGGERGESLPDAAMQTTLEPAKELLLNGYAAMGILEEFNT---LFNAAQKMPGVDWVREFGRIGIKKVNTRVKHEEE------EALVAALTSSEIKRYIGLDLLLYEHAVSVFHQQAAMYGLE 1083
T S + FA WGNFA+RQFAL ++ V ++ +++ T T+ WY++K YL RG D +++ LEP K LL YAA+GI +E T LF+ A M G+DW + +GI N VK + E E AL + I + LD+ LYEHA+ VF Q A +G+E
Sbjct: 373 TESTGLVVFAELWGNFAMRQFALESVSPSAVKEW--AAQRQARTGTSM-----WYLVKEYL--------ARGGIAEDEVLESMLEPVKGLLSTQYAAVGIAQELETTMVLFSKALSMEGLDWSSSWATLGI---NEEVKQDSEYDIAESEPFRQALENPRIVSALRLDMSLYEHAMHVFKDQVAQFGIE 543
BLAST of mRNA_D-herbacea_M_contig92.15837.1 vs. uniprot
Match: A0A6H5JNJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ0_9PHAE) HSP 1 Score: 90.5 bits (223), Expect = 3.490e-16 Identity = 59/189 (31.22%), Postives = 94/189 (49.74%), Query Frame = 1
Query: 559 IKKFARHWGNFAVRQFALSWITHDEVVDYFMSSREGNLTETAFADLPGWYMLKIYLDDQSRGGGERGESLPDAAMQTT------------LEPAKELLLNGYAAMGILEEFNT---LFNAAQKMPGVDWVREFGRIGIKKVNTRVKHEEEEALVAALTSSEIKRYIGLDLLLYEHAVSVFHQQAAMYGL 1080
I FA+HWGN+A+ QFAL + E+ D P W+ K+Y + + G ++ A +TT L+P +ELL + YAA+GILE + LF+ A ++PG +W + +K ++ E++ L AA+T +++Y+ LDLLLYE+A S+ +Q Y L
Sbjct: 149 IYDFAKHWGNYALLQFALGVVDQHEIF-------------AEEVDAPAWFKAKLYFEGRLGYPG----NMSTATNRTTHDEWQSVWIPDILQPVEELLRSNYAAVGILEHWQRSMMLFDHALEIPGFNWTVASASLSPRKSQNKIV-EKKAMLAAAMTDPVLRQYVWLDLLLYEYACSLHEEQLRRYDL 319
BLAST of mRNA_D-herbacea_M_contig92.15837.1 vs. uniprot
Match: A0A6H5JQY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQY7_9PHAE) HSP 1 Score: 89.7 bits (221), Expect = 6.170e-16 Identity = 61/185 (32.97%), Postives = 94/185 (50.81%), Query Frame = 1
Query: 559 IKKFARHWGNFAVRQFALSWITHDEVVDYFMSSREGNLTETAFADLPGWYMLKIYLDDQSRGGGERGESL--------PDAAMQTTLEPAKELLLNGYAAMGILEEFNT---LFNAAQKMPGVDWVREFGRIGIKKVNTRVKHEEEEALVAALTSSEIKRYIGLDLLLYEHAVSVFHQQAAMYGL 1080
I FA HWGN V QFAL++ ++++ +TE P WY K+Y + + G+ S + M L+P +ELL + YAA+GILE++ T LF+ A ++PG +W + V+ + + LVA++T +K+ + LD+LLYEHA SV Q + YGL
Sbjct: 150 IYDFAEHWGNHGVVQFALAFEDLNDIL----------VTEVKS---PPWYKAKLYFEGRLGPSGKTSTSANISTKDVCQNVWMPEILQPVEELLRSKYAAVGILEQWETSMMLFDHALQLPGFNWTSTSASSTPRNVHD--SKAKNDLLVASMTDPVLKQILWLDILLYEHACSVHKAQLSRYGL 319 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig92.15837.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_M_contig92.15837.1 >prot_D-herbacea_M_contig92.15837.1 ID=prot_D-herbacea_M_contig92.15837.1|Name=mRNA_D-herbacea_M_contig92.15837.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=167bp MLRLQSLARLLRGFLSCIHIARCTFLGKAVPPAAAQPQEVVARTIEPASNback to top mRNA from alignment at D-herbacea_M_contig92:241171..252680+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_M_contig92.15837.1 ID=mRNA_D-herbacea_M_contig92.15837.1|Name=mRNA_D-herbacea_M_contig92.15837.1|organism=Desmarestia herbacea DmunM male|type=mRNA|length=11510bp|location=Sequence derived from alignment at D-herbacea_M_contig92:241171..252680+ (Desmarestia herbacea DmunM male)back to top Coding sequence (CDS) from alignment at D-herbacea_M_contig92:241171..252680+ >mRNA_D-herbacea_M_contig92.15837.1 ID=mRNA_D-herbacea_M_contig92.15837.1|Name=mRNA_D-herbacea_M_contig92.15837.1|organism=Desmarestia herbacea DmunM male|type=CDS|length=1002bp|location=Sequence derived from alignment at D-herbacea_M_contig92:241171..252680+ (Desmarestia herbacea DmunM male)back to top |